RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 CRLF1O75462 422 aa11.62□□□□□ -0.55
TM9SF1-201ENST00000261789 PRIMA1Q86XR5 153 aa11.62□□□□□ -0.55
TM9SF1-201ENST00000261789 TRGV2A0A075B6R0 118 aa11.61□□□□□ -0.55
TM9SF1-201ENST00000261789 IGKV3OR2-268A0A0C4DH90 116 aa11.61□□□□□ -0.55
TM9SF1-201ENST00000261789 TRBV10-1A0A0K0K1A3 114 aa11.61□□□□□ -0.55
TM9SF1-201ENST00000261789 PLAC8L1A1L4L8 177 aa11.61□□□□□ -0.55
TM9SF1-201ENST00000261789 UBE2WQ96B02 151 aa11.61□□□□□ -0.55
TM9SF1-201ENST00000261789 PDZD2O15018 2839 aa11.61□□□□□ -0.55
TM9SF1-201ENST00000261789 LST1O00453 97 aa11.61□□□□□ -0.55
TM9SF1-201ENST00000261789 MEIG1Q5JSS6 88 aa11.61□□□□□ -0.55
TM9SF1-201ENST00000261789 F5H768 121 aa11.6□□□□□ -0.55
TM9SF1-201ENST00000261789 ANK3Q12955 4377 aaKnown RBP11.6□□□□□ -0.55
TM9SF1-201ENST00000261789 LINC01006Q8NI28 216 aa11.6□□□□□ -0.55
TM9SF1-201ENST00000261789 RNF183Q96D59 192 aa11.6□□□□□ -0.55
TM9SF1-201ENST00000261789 UBE2L6O14933 153 aa11.59□□□□□ -0.55
TM9SF1-201ENST00000261789 CSDC2Q9Y534 153 aaKnown RBP11.59□□□□□ -0.55
TM9SF1-201ENST00000261789 GCN1Q92616 2671 aaKnown RBP11.58□□□□□ -0.56
TM9SF1-201ENST00000261789 TRAV8-4A0A0B4J246 113 aa11.58□□□□□ -0.56
TM9SF1-201ENST00000261789 TMEM243Q9BU79 118 aa11.58□□□□□ -0.56
TM9SF1-201ENST00000261789 FAM19A3Q7Z5A8 133 aa11.57□□□□□ -0.56
TM9SF1-201ENST00000261789 GAGE6Q13070 117 aa11.57□□□□□ -0.56
TM9SF1-201ENST00000261789 LINC01600Q96MT4 127 aa11.57□□□□□ -0.56
TM9SF1-201ENST00000261789 CITED1Q99966 193 aa11.56□□□□□ -0.56
TM9SF1-201ENST00000261789 C19orf73Q9NVV2 129 aa11.56□□□□□ -0.56
TM9SF1-201ENST00000261789 TEX29Q8N6K0 151 aa11.55□□□□□ -0.56
TM9SF1-201ENST00000261789 TRGV4A0A0C4DH28 118 aa11.55□□□□□ -0.56
TM9SF1-201ENST00000261789 H3BT86 120 aa11.55□□□□□ -0.56
TM9SF1-201ENST00000261789 IGLV4-60A0A075B6I1 120 aa11.54□□□□□ -0.56
TM9SF1-201ENST00000261789 SNCGO76070 127 aa11.54□□□□□ -0.56
TM9SF1-201ENST00000261789 C16orf74Q96GX8 76 aa11.54□□□□□ -0.56
TM9SF1-201ENST00000261789 TOMM7Q9P0U1 55 aa11.54□□□□□ -0.56
TM9SF1-201ENST00000261789 CSNK1G2-AS1Q8NCQ2 148 aa11.54□□□□□ -0.56
TM9SF1-201ENST00000261789 VWFP04275 2813 aa11.53□□□□□ -0.56
TM9SF1-201ENST00000261789 IGLV1-51P01701 117 aa11.52□□□□□ -0.56
TM9SF1-201ENST00000261789 KRTAP1-1Q07627 177 aa11.52□□□□□ -0.56
TM9SF1-201ENST00000261789 C15orf53Q8NAA6 179 aa11.52□□□□□ -0.57
TM9SF1-201ENST00000261789 TTC32Q5I0X7 151 aa11.51□□□□□ -0.57
TM9SF1-201ENST00000261789 ANAPC13Q9BS18 74 aa11.51□□□□□ -0.57
TM9SF1-201ENST00000261789 COX7A2LO14548 114 aa11.51□□□□□ -0.57
TM9SF1-201ENST00000261789 SHISA2Q6UWI4 295 aa11.51□□□□□ -0.57
TM9SF1-201ENST00000261789 UNC79Q9P2D8 2635 aa11.51□□□□□ -0.57
TM9SF1-201ENST00000261789 TRBV6-4A0A1B0GX49 114 aa11.5□□□□□ -0.57
TM9SF1-201ENST00000261789 GAGE2BQ13066 116 aa11.5□□□□□ -0.57
TM9SF1-201ENST00000261789 GAGE2EQ4V326 116 aa11.5□□□□□ -0.57
TM9SF1-201ENST00000261789 GAGE2DQ9UEU5 116 aa11.5□□□□□ -0.57
TM9SF1-201ENST00000261789 DEFB130BP0DP73 79 aa11.5□□□□□ -0.57
TM9SF1-201ENST00000261789 DEFB130AP0DP74 79 aa11.5□□□□□ -0.57
TM9SF1-201ENST00000261789 FHL2Q14192 279 aa11.5□□□□□ -0.57
TM9SF1-201ENST00000261789 FAM218AQ96MZ4 157 aa11.49□□□□□ -0.57
TM9SF1-201ENST00000261789 CHCHD5Q9BSY4 110 aa11.49□□□□□ -0.57
TM9SF1-201ENST00000261789 MIR7-3HGQ8N6C7 128 aa11.49□□□□□ -0.57
TM9SF1-201ENST00000261789 COX7B2Q8TF08 81 aa11.49□□□□□ -0.57
TM9SF1-201ENST00000261789 HERV-K104P63124 156 aa11.48□□□□□ -0.57
TM9SF1-201ENST00000261789 OVOL2Q9BRP0 275 aa11.48□□□□□ -0.57
TM9SF1-201ENST00000261789 TRBV6-8A0A0A6YYG3 113 aa11.48□□□□□ -0.57
TM9SF1-201ENST00000261789 RNASE1P07998 156 aaKnown RBP11.47□□□□□ -0.57
TM9SF1-201ENST00000261789 NHLRC4P0CG21 123 aaPredicted RBP11.47□□□□□ -0.57
TM9SF1-201ENST00000261789 C5orf38Q86SI9 138 aa11.47□□□□□ -0.57
TM9SF1-201ENST00000261789 COPS9Q8WXC6 57 aa11.46□□□□□ -0.57
TM9SF1-201ENST00000261789 LINC00337Q8N6G1 96 aa11.46□□□□□ -0.58
TM9SF1-201ENST00000261789 C11orf68Q9H3H3 251 aaKnown RBP11.46□□□□□ -0.58
TM9SF1-201ENST00000261789 C16orf95Q9H693 158 aa11.46□□□□□ -0.58
TM9SF1-201ENST00000261789 CMC4P56277 68 aaPredicted RBP11.45□□□□□ -0.58
TM9SF1-201ENST00000261789 LINC00158P58513 81 aa11.45□□□□□ -0.58
TM9SF1-201ENST00000261789 IGKV2-28A0A075B6P5 120 aa11.45□□□□□ -0.58
TM9SF1-201ENST00000261789 IGHV3OR16-9A0A0B4J2B5 98 aa11.45□□□□□ -0.58
TM9SF1-201ENST00000261789 IGKV2D-28P01615 120 aa11.45□□□□□ -0.58
TM9SF1-201ENST00000261789 Q9HAA7 133 aa11.45□□□□□ -0.58
TM9SF1-201ENST00000261789 PFN2P35080 140 aa11.44□□□□□ -0.58
TM9SF1-201ENST00000261789 NDUFV3P56181 108 aaKnown RBP11.44□□□□□ -0.58
TM9SF1-201ENST00000261789 DEFB121Q5J5C9 76 aa11.44□□□□□ -0.58
TM9SF1-201ENST00000261789 SMR3AQ99954 134 aa11.44□□□□□ -0.58
TM9SF1-201ENST00000261789 A0A096LPF7 62 aa11.44□□□□□ -0.58
TM9SF1-201ENST00000261789 SND1-IT1Q9HBX3 110 aa11.44□□□□□ -0.58
TM9SF1-201ENST00000261789 CLPSL2Q6UWE3 100 aa11.43□□□□□ -0.58
TM9SF1-201ENST00000261789 FAM110AQ9BQ89 295 aa11.43□□□□□ -0.58
TM9SF1-201ENST00000261789 FASNP49327 2511 aaKnown RBP11.42□□□□□ -0.58
TM9SF1-201ENST00000261789 BAALC-AS2P0C853 105 aa11.42□□□□□ -0.58
TM9SF1-201ENST00000261789 C22orf24Q9Y442 160 aa11.42□□□□□ -0.58
TM9SF1-201ENST00000261789 KRTAP10-3P60369 221 aa11.42□□□□□ -0.58
TM9SF1-201ENST00000261789 HIVEP2P31629 2446 aa11.41□□□□□ -0.58
TM9SF1-201ENST00000261789 CRPP02741 224 aa11.41□□□□□ -0.58
TM9SF1-201ENST00000261789 GYPEP15421 78 aa11.41□□□□□ -0.58
TM9SF1-201ENST00000261789 CCL18P55774 89 aa11.41□□□□□ -0.58
TM9SF1-201ENST00000261789 XCL1P47992 114 aa11.4□□□□□ -0.58
TM9SF1-201ENST00000261789 LINC00959A0A1B0GUT2 108 aa11.4□□□□□ -0.59
TM9SF1-201ENST00000261789 A0A087WZ39 114 aa11.39□□□□□ -0.59
TM9SF1-201ENST00000261789 TRAV13-2A0A0B4J235 113 aa11.39□□□□□ -0.59
TM9SF1-201ENST00000261789 FAM240AA0A1B0GVK7 77 aa11.39□□□□□ -0.59
TM9SF1-201ENST00000261789 TRACP01848 142 aa11.39□□□□□ -0.59
TM9SF1-201ENST00000261789 SPATA3Q8NHX4 192 aa11.39□□□□□ -0.59
TM9SF1-201ENST00000261789 SMIM11BQ8TCY0 68 aa11.38□□□□□ -0.59
TM9SF1-201ENST00000261789 SS18L2Q9UHA2 77 aa11.38□□□□□ -0.59
TM9SF1-201ENST00000261789 HECTD1Q9ULT8 2610 aa11.38□□□□□ -0.59
TM9SF1-201ENST00000261789 RPL28P46779 137 aaKnown RBP11.38□□□□□ -0.59
TM9SF1-201ENST00000261789 A0A087WYN8 130 aa11.37□□□□□ -0.59
TM9SF1-201ENST00000261789 SMCR5Q8TEV8 140 aa11.37□□□□□ -0.59
TM9SF1-201ENST00000261789 DEFB4AO15263 64 aa11.37□□□□□ -0.59
TM9SF1-201ENST00000261789 HILS1P60008 231 aa11.37□□□□□ -0.59
TM9SF1-201ENST00000261789 TENM1Q9UKZ4 2725 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms