RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 RNF183Q96D59 192 aa13.78□□□□□ -0.2
CDC42EP1-201ENST00000249014 SLC25A20O43772 301 aa13.77□□□□□ -0.21
CDC42EP1-201ENST00000249014 PF4P02776 101 aa13.77□□□□□ -0.21
CDC42EP1-201ENST00000249014 IFITM1P13164 125 aa13.77□□□□□ -0.21
CDC42EP1-201ENST00000249014 ANKRD29Q8N6D5 301 aa13.77□□□□□ -0.21
CDC42EP1-201ENST00000249014 SMAGPQ0VAQ4 97 aa13.76□□□□□ -0.21
CDC42EP1-201ENST00000249014 SIGMAR1Q99720 223 aa13.76□□□□□ -0.21
CDC42EP1-201ENST00000249014 ICOSQ9Y6W8 199 aa13.76□□□□□ -0.21
CDC42EP1-201ENST00000249014 LY6G6DO95868 133 aa13.76□□□□□ -0.21
CDC42EP1-201ENST00000249014 PPDPFLQ8WWR9 84 aa13.76□□□□□ -0.21
CDC42EP1-201ENST00000249014 A0A0U1RRA0 63 aa13.75□□□□□ -0.21
CDC42EP1-201ENST00000249014 CIRBPQ14011 172 aaKnown RBP13.75□□□□□ -0.21
CDC42EP1-201ENST00000249014 ATXN8Q156A1 80 aa13.75□□□□□ -0.21
CDC42EP1-201ENST00000249014 GCN1Q92616 2671 aaKnown RBP13.74□□□□□ -0.21
CDC42EP1-201ENST00000249014 GAGE6Q13070 117 aa13.74□□□□□ -0.21
CDC42EP1-201ENST00000249014 LINC00308Q8TCZ7 52 aa13.74□□□□□ -0.21
CDC42EP1-201ENST00000249014 H7C423 109 aa13.73□□□□□ -0.21
CDC42EP1-201ENST00000249014 CRLF1O75462 422 aa13.73□□□□□ -0.21
CDC42EP1-201ENST00000249014 SPATA3Q8NHX4 192 aa13.73□□□□□ -0.21
CDC42EP1-201ENST00000249014 LINC01620Q4KN68 170 aa13.73□□□□□ -0.21
CDC42EP1-201ENST00000249014 VWFP04275 2813 aa13.73□□□□□ -0.21
CDC42EP1-201ENST00000249014 IGLV4-60A0A075B6I1 120 aa13.72□□□□□ -0.21
CDC42EP1-201ENST00000249014 TRBV6-8A0A0A6YYG3 113 aa13.72□□□□□ -0.21
CDC42EP1-201ENST00000249014 DEFB130BP0DP73 79 aa13.72□□□□□ -0.21
CDC42EP1-201ENST00000249014 DEFB130AP0DP74 79 aa13.72□□□□□ -0.21
CDC42EP1-201ENST00000249014 PRIMA1Q86XR5 153 aa13.72□□□□□ -0.21
CDC42EP1-201ENST00000249014 RPL13AP40429 203 aaKnown RBP13.72□□□□□ -0.21
CDC42EP1-201ENST00000249014 SOSTDC1Q6X4U4 206 aa13.72□□□□□ -0.21
CDC42EP1-201ENST00000249014 FN1P02751 2386 aaKnown RBP13.71□□□□□ -0.21
CDC42EP1-201ENST00000249014 M0QXV9 152 aa13.71□□□□□ -0.21
CDC42EP1-201ENST00000249014 CDIP1Q9H305 208 aa13.71□□□□□ -0.21
CDC42EP1-201ENST00000249014 HECTD1Q9ULT8 2610 aa13.7□□□□□ -0.22
CDC42EP1-201ENST00000249014 IGKV3OR2-268A0A0C4DH90 116 aa13.69□□□□□ -0.22
CDC42EP1-201ENST00000249014 KIR2DL5BQ8NHK3 375 aa13.69□□□□□ -0.22
CDC42EP1-201ENST00000249014 OTOGQ6ZRI0 2925 aa13.69□□□□□ -0.22
CDC42EP1-201ENST00000249014 MEIG1Q5JSS6 88 aa13.69□□□□□ -0.22
CDC42EP1-201ENST00000249014 LINC00612Q8N6U2 182 aa13.69□□□□□ -0.22
CDC42EP1-201ENST00000249014 CHCHD5Q9BSY4 110 aa13.69□□□□□ -0.22
CDC42EP1-201ENST00000249014 X6R8D5 127 aa13.69□□□□□ -0.22
CDC42EP1-201ENST00000249014 CLEC2BQ92478 149 aa13.68□□□□□ -0.22
CDC42EP1-201ENST00000249014 NBEAL2Q6ZNJ1 2754 aa13.67□□□□□ -0.22
CDC42EP1-201ENST00000249014 COX6CP09669 75 aa13.66□□□□□ -0.22
CDC42EP1-201ENST00000249014 HERV-K104P63124 156 aa13.66□□□□□ -0.22
CDC42EP1-201ENST00000249014 TRBV10-2A0A0K0K1G8 114 aa13.66□□□□□ -0.22
CDC42EP1-201ENST00000249014 LINC01600Q96MT4 127 aa13.66□□□□□ -0.22
CDC42EP1-201ENST00000249014 INAFM1C9JVW0 142 aa13.65□□□□□ -0.22
CDC42EP1-201ENST00000249014 NTN5Q8WTR8 489 aaPredicted RBP13.65□□□□□ -0.22
CDC42EP1-201ENST00000249014 GYPEP15421 78 aa13.64□□□□□ -0.23
CDC42EP1-201ENST00000249014 IGHV3OR16-9A0A0B4J2B5 98 aa13.64□□□□□ -0.23
CDC42EP1-201ENST00000249014 COX7B2Q8TF08 81 aa13.64□□□□□ -0.23
CDC42EP1-201ENST00000249014 LST1O00453 97 aa13.63□□□□□ -0.23
CDC42EP1-201ENST00000249014 SCGB1A1P11684 91 aa13.63□□□□□ -0.23
CDC42EP1-201ENST00000249014 TENM1Q9UKZ4 2725 aa13.62□□□□□ -0.23
CDC42EP1-201ENST00000249014 NOTCH2Q04721 2471 aa13.62□□□□□ -0.23
CDC42EP1-201ENST00000249014 COPS9Q8WXC6 57 aa13.62□□□□□ -0.23
CDC42EP1-201ENST00000249014 TOMM7Q9P0U1 55 aa13.62□□□□□ -0.23
CDC42EP1-201ENST00000249014 NSD1Q96L73 2696 aaPredicted RBP13.62□□□□□ -0.23
CDC42EP1-201ENST00000249014 TEX49A0A1B0GTD5 131 aa13.61□□□□□ -0.23
CDC42EP1-201ENST00000249014 C9orf66Q5T8R8 295 aa13.61□□□□□ -0.23
CDC42EP1-201ENST00000249014 SMIM9A6NGZ8 99 aa13.6□□□□□ -0.23
CDC42EP1-201ENST00000249014 XGP55808 180 aa13.6□□□□□ -0.23
CDC42EP1-201ENST00000249014 FAM222AQ5U5X8 452 aa13.59□□□□□ -0.23
CDC42EP1-201ENST00000249014 C2orf82Q6UX34 121 aa13.59□□□□□ -0.23
CDC42EP1-201ENST00000249014 A0A087WZ39 114 aa13.58□□□□□ -0.24
CDC42EP1-201ENST00000249014 A0A096LPF7 62 aa13.58□□□□□ -0.24
CDC42EP1-201ENST00000249014 LINC00959A0A1B0GUT2 108 aa13.58□□□□□ -0.24
CDC42EP1-201ENST00000249014 MT-ATP8P03928 68 aa13.58□□□□□ -0.24
CDC42EP1-201ENST00000249014 SHISA2Q6UWI4 295 aa13.58□□□□□ -0.24
CDC42EP1-201ENST00000249014 C5orf38Q86SI9 138 aa13.58□□□□□ -0.24
CDC42EP1-201ENST00000249014 DEFB4AO15263 64 aa13.58□□□□□ -0.24
CDC42EP1-201ENST00000249014 PRO0255Q9UI72 69 aa13.58□□□□□ -0.24
CDC42EP1-201ENST00000249014 DEFB135Q30KP9 77 aa13.57□□□□□ -0.24
CDC42EP1-201ENST00000249014 MIR7-3HGQ8N6C7 128 aa13.57□□□□□ -0.24
CDC42EP1-201ENST00000249014 PPDPFQ9H3Y8 114 aa13.56□□□□□ -0.24
CDC42EP1-201ENST00000249014 TMEM262E9PQX1 116 aa13.56□□□□□ -0.24
CDC42EP1-201ENST00000249014 H3BT86 120 aa13.56□□□□□ -0.24
CDC42EP1-201ENST00000249014 COX7A2LO14548 114 aa13.55□□□□□ -0.24
CDC42EP1-201ENST00000249014 UBE2WQ96B02 151 aa13.55□□□□□ -0.24
CDC42EP1-201ENST00000249014 A0A1B0GUV1 79 aa13.54□□□□□ -0.24
CDC42EP1-201ENST00000249014 LYRM9A8MSI8 78 aa13.54□□□□□ -0.24
CDC42EP1-201ENST00000249014 PAX4O43316 350 aa13.53□□□□□ -0.24
CDC42EP1-201ENST00000249014 CLPSL2Q6UWE3 100 aa13.52□□□□□ -0.24
CDC42EP1-201ENST00000249014 XCL1P47992 114 aa13.52□□□□□ -0.25
CDC42EP1-201ENST00000249014 LINC00158P58513 81 aa13.52□□□□□ -0.25
CDC42EP1-201ENST00000249014 IGKV2-28A0A075B6P5 120 aa13.51□□□□□ -0.25
CDC42EP1-201ENST00000249014 IGKV2D-28P01615 120 aa13.51□□□□□ -0.25
CDC42EP1-201ENST00000249014 IGHV4-28A0A0C4DH34 117 aa13.51□□□□□ -0.25
CDC42EP1-201ENST00000249014 LINC00337Q8N6G1 96 aa13.51□□□□□ -0.25
CDC42EP1-201ENST00000249014 SND1-IT1Q9HBX3 110 aa13.51□□□□□ -0.25
CDC42EP1-201ENST00000249014 CITED1Q99966 193 aa13.5□□□□□ -0.25
CDC42EP1-201ENST00000249014 HIVEP1P15822 2718 aa13.5□□□□□ -0.25
CDC42EP1-201ENST00000249014 IBA57-AS1B1ANH7 110 aa13.49□□□□□ -0.25
CDC42EP1-201ENST00000249014 APOC4P55056 127 aa13.49□□□□□ -0.25
CDC42EP1-201ENST00000249014 SS18Q15532 418 aa13.49□□□□□ -0.25
CDC42EP1-201ENST00000249014 C11orf68Q9H3H3 251 aaKnown RBP13.49□□□□□ -0.25
CDC42EP1-201ENST00000249014 PFN2P35080 140 aa13.48□□□□□ -0.25
CDC42EP1-201ENST00000249014 CCL18P55774 89 aa13.48□□□□□ -0.25
CDC42EP1-201ENST00000249014 TRAV13-2A0A0B4J235 113 aa13.48□□□□□ -0.25
CDC42EP1-201ENST00000249014 FAM218AQ96MZ4 157 aa13.48□□□□□ -0.25
CDC42EP1-201ENST00000249014 CELA1Q9UNI1 258 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms