RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 IL17DQ8TAD2 202 aa8.46□□□□□ -1.05
NOD1-201ENST00000222823 C9orf85Q96MD7 179 aa8.46□□□□□ -1.05
NOD1-201ENST00000222823 C14orf177Q52M58 125 aa8.46□□□□□ -1.06
NOD1-201ENST00000222823 A0A1W2PPR1 153 aa8.46□□□□□ -1.06
NOD1-201ENST00000222823 A8MZ25 164 aa8.45□□□□□ -1.06
NOD1-201ENST00000222823 SPATA25Q9BR10 227 aa8.45□□□□□ -1.06
NOD1-201ENST00000222823 TEX49A0A1B0GTD5 131 aa8.44□□□□□ -1.06
NOD1-201ENST00000222823 C2orf91Q6ZV80 131 aa8.44□□□□□ -1.06
NOD1-201ENST00000222823 SS18L2Q9UHA2 77 aa8.44□□□□□ -1.06
NOD1-201ENST00000222823 FLNBO75369 2602 aaKnown RBP8.44□□□□□ -1.06
NOD1-201ENST00000222823 TRIAP1O43715 76 aa8.44□□□□□ -1.06
NOD1-201ENST00000222823 PTPRBP23467 1997 aa8.44□□□□□ -1.06
NOD1-201ENST00000222823 F8P00451 2351 aa8.43□□□□□ -1.06
NOD1-201ENST00000222823 KRTAP10-9P60411 292 aa8.43□□□□□ -1.06
NOD1-201ENST00000222823 C4orf48Q5BLP8 95 aa8.43□□□□□ -1.06
NOD1-201ENST00000222823 LAMA1P25391 3075 aa8.43□□□□□ -1.06
NOD1-201ENST00000222823 TRBV30A0A0K0K1B3 111 aa8.42□□□□□ -1.06
NOD1-201ENST00000222823 LOC100131303A0A0U1RQF7 123 aa8.42□□□□□ -1.06
NOD1-201ENST00000222823 C6orf99Q4VX62 202 aa8.42□□□□□ -1.06
NOD1-201ENST00000222823 SYCNQ0VAF6 134 aa8.42□□□□□ -1.06
NOD1-201ENST00000222823 CD164L2Q6UWJ8 174 aa8.42□□□□□ -1.06
NOD1-201ENST00000222823 SLPIP03973 132 aa8.41□□□□□ -1.06
NOD1-201ENST00000222823 ODF3L2Q3SX64 289 aa8.41□□□□□ -1.06
NOD1-201ENST00000222823 KIR2DL5BQ8NHK3 375 aa8.41□□□□□ -1.06
NOD1-201ENST00000222823 UBE2D4Q9Y2X8 147 aa8.41□□□□□ -1.06
NOD1-201ENST00000222823 BPY2O14599 106 aa8.41□□□□□ -1.06
NOD1-201ENST00000222823 SMIM20Q8N5G0 67 aa8.41□□□□□ -1.06
NOD1-201ENST00000222823 B9D2Q9BPU9 175 aa8.41□□□□□ -1.06
NOD1-201ENST00000222823 COL27A1Q8IZC6 1860 aaPredicted RBP8.4□□□□□ -1.06
NOD1-201ENST00000222823 TIMM17BO60830 172 aa8.4□□□□□ -1.06
NOD1-201ENST00000222823 KPRPQ5T749 579 aaPredicted RBP8.4□□□□□ -1.06
NOD1-201ENST00000222823 A0A096LNI7 61 aa8.4□□□□□ -1.06
NOD1-201ENST00000222823 MRPS36P82909 103 aaKnown RBP8.4□□□□□ -1.06
NOD1-201ENST00000222823 EDN2P20800 178 aa8.4□□□□□ -1.07
NOD1-201ENST00000222823 LINC00526Q96FQ7 95 aa8.4□□□□□ -1.07
NOD1-201ENST00000222823 A0A096LNJ9 63 aa8.39□□□□□ -1.07
NOD1-201ENST00000222823 LINC00959A0A1B0GUT2 108 aa8.39□□□□□ -1.07
NOD1-201ENST00000222823 PRB2P02812 416 aaPredicted RBP8.39□□□□□ -1.07
NOD1-201ENST00000222823 CRIP2P52943 208 aaPredicted RBP8.39□□□□□ -1.07
NOD1-201ENST00000222823 TRAV10A0A0B4J240 114 aa8.39□□□□□ -1.07
NOD1-201ENST00000222823 H0Y9J4 135 aa8.39□□□□□ -1.07
NOD1-201ENST00000222823 RNF183Q96D59 192 aa8.39□□□□□ -1.07
NOD1-201ENST00000222823 WFDC9Q8NEX5 89 aa8.39□□□□□ -1.07
NOD1-201ENST00000222823 TRAV23DV6A0A075B6W5 121 aa8.38□□□□□ -1.07
NOD1-201ENST00000222823 LELP1Q5T871 98 aa8.38□□□□□ -1.07
NOD1-201ENST00000222823 A0A087WZ39 114 aa8.38□□□□□ -1.07
NOD1-201ENST00000222823 IGIPA6NJ69 53 aa8.38□□□□□ -1.07
NOD1-201ENST00000222823 FAM19A1Q7Z5A9 133 aa8.38□□□□□ -1.07
NOD1-201ENST00000222823 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.38□□□□□ -1.07
NOD1-201ENST00000222823 UBE2D3P61077 147 aa8.38□□□□□ -1.07
NOD1-201ENST00000222823 UBE2D2P62837 147 aa8.38□□□□□ -1.07
NOD1-201ENST00000222823 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.38□□□□□ -1.07
NOD1-201ENST00000222823 CELSR3Q9NYQ7 3312 aa8.37□□□□□ -1.07
NOD1-201ENST00000222823 MT-ATP8P03928 68 aa8.37□□□□□ -1.07
NOD1-201ENST00000222823 UBE2D1P51668 147 aa8.37□□□□□ -1.07
NOD1-201ENST00000222823 OXLD1Q5BKU9 147 aa8.37□□□□□ -1.07
NOD1-201ENST00000222823 CDC42SE2Q9NRR3 84 aa8.37□□□□□ -1.07
NOD1-201ENST00000222823 AGRNO00468 2067 aa8.36□□□□□ -1.07
NOD1-201ENST00000222823 UPK3BQ9BT76 320 aa8.36□□□□□ -1.07
NOD1-201ENST00000222823 SMR3AQ99954 134 aa8.36□□□□□ -1.07
NOD1-201ENST00000222823 C5orf47Q569G3 176 aa8.36□□□□□ -1.07
NOD1-201ENST00000222823 POM121L12Q8N7R1 296 aa8.36□□□□□ -1.07
NOD1-201ENST00000222823 PLA2G2AP14555 144 aa8.35□□□□□ -1.07
NOD1-201ENST00000222823 SDIM1Q6ZPB5 146 aa8.35□□□□□ -1.07
NOD1-201ENST00000222823 FAM19A5Q7Z5A7 132 aaPredicted RBP8.35□□□□□ -1.07
NOD1-201ENST00000222823 CLUHP3Q96NS8 147 aa8.35□□□□□ -1.07
NOD1-201ENST00000222823 BRI3O95415 125 aa8.35□□□□□ -1.07
NOD1-201ENST00000222823 Q6ZQY7 126 aa8.35□□□□□ -1.07
NOD1-201ENST00000222823 VPS13AQ96RL7 3174 aa8.34□□□□□ -1.07
NOD1-201ENST00000222823 CHKB-CPT1BH3BT56 60 aa8.34□□□□□ -1.07
NOD1-201ENST00000222823 IGHV4-30-4P0DP06 118 aa8.34□□□□□ -1.07
NOD1-201ENST00000222823 LINC00242Q5T6M2 205 aa8.34□□□□□ -1.07
NOD1-201ENST00000222823 NDUFA7O95182 113 aa8.34□□□□□ -1.07
NOD1-201ENST00000222823 IGLV1-51P01701 117 aa8.34□□□□□ -1.07
NOD1-201ENST00000222823 LST1O00453 97 aa8.33□□□□□ -1.08
NOD1-201ENST00000222823 ANKRD17O75179 2603 aaKnown RBP8.33□□□□□ -1.08
NOD1-201ENST00000222823 NDUFV3P56181 108 aaKnown RBP8.33□□□□□ -1.08
NOD1-201ENST00000222823 C20orf197Q8N268 126 aa8.33□□□□□ -1.08
NOD1-201ENST00000222823 MUC4Q99102 2169 aa8.33□□□□□ -1.08
NOD1-201ENST00000222823 EYSQ5T1H1 3165 aa8.33□□□□□ -1.08
NOD1-201ENST00000222823 IGKV2-28A0A075B6P5 120 aa8.33□□□□□ -1.08
NOD1-201ENST00000222823 IGKV2D-28P01615 120 aa8.33□□□□□ -1.08
NOD1-201ENST00000222823 CCKP06307 115 aa8.33□□□□□ -1.08
NOD1-201ENST00000222823 SCXQ7RTU7 201 aa8.33□□□□□ -1.08
NOD1-201ENST00000222823 MYO15AQ9UKN7 3530 aa8.32□□□□□ -1.08
NOD1-201ENST00000222823 IGLV2-18A0A075B6J9 118 aa8.32□□□□□ -1.08
NOD1-201ENST00000222823 C1orf158Q8N1D5 194 aa8.32□□□□□ -1.08
NOD1-201ENST00000222823 IGLV4-69A0A075B6H9 119 aa8.32□□□□□ -1.08
NOD1-201ENST00000222823 J3KT08 172 aa8.32□□□□□ -1.08
NOD1-201ENST00000222823 ZNF580Q9UK33 172 aa8.32□□□□□ -1.08
NOD1-201ENST00000222823 ATP5EP2Q5VTU8 51 aa8.31□□□□□ -1.08
NOD1-201ENST00000222823 Q8IZM0 81 aa8.31□□□□□ -1.08
NOD1-201ENST00000222823 SMIM11BQ8TCY0 68 aa8.31□□□□□ -1.08
NOD1-201ENST00000222823 M0R378 163 aa8.31□□□□□ -1.08
NOD1-201ENST00000222823 ENHOQ6UWT2 76 aa8.31□□□□□ -1.08
NOD1-201ENST00000222823 USP24Q9UPU5 2620 aa8.3□□□□□ -1.08
NOD1-201ENST00000222823 LRCOL1A6NCL2 159 aa8.3□□□□□ -1.08
NOD1-201ENST00000222823 CYSRT1A8MQ03 144 aa8.3□□□□□ -1.08
NOD1-201ENST00000222823 LINC01546A6NGU7 62 aa8.29□□□□□ -1.08
NOD1-201ENST00000222823 UQCRQO14949 82 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms