RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 ATP5G1P05496 136 aa8.9□□□□□ -0.98
TM9SF4-201ENST00000217315 INAFM2P0DMQ5 153 aa8.9□□□□□ -0.98
TM9SF4-201ENST00000217315 ADAMTSL4-AS1Q5T5F5 129 aa8.89□□□□□ -0.99
TM9SF4-201ENST00000217315 MT-ATP8P03928 68 aa8.89□□□□□ -0.99
TM9SF4-201ENST00000217315 HILS1P60008 231 aa8.89□□□□□ -0.99
TM9SF4-201ENST00000217315 UBE2D3P61077 147 aa8.89□□□□□ -0.99
TM9SF4-201ENST00000217315 UBE2D2P62837 147 aa8.89□□□□□ -0.99
TM9SF4-201ENST00000217315 TRBV30A0A0K0K1B3 111 aa8.89□□□□□ -0.99
TM9SF4-201ENST00000217315 H3BT86 120 aa8.89□□□□□ -0.99
TM9SF4-201ENST00000217315 PLA2G2AP14555 144 aa8.89□□□□□ -0.99
TM9SF4-201ENST00000217315 COX6A2Q02221 97 aa8.89□□□□□ -0.99
TM9SF4-201ENST00000217315 COX7A2LO14548 114 aa8.89□□□□□ -0.99
TM9SF4-201ENST00000217315 SPART-AS1P0CW21 52 aa8.89□□□□□ -0.99
TM9SF4-201ENST00000217315 BEAN1Q3B7T3 259 aa8.89□□□□□ -0.99
TM9SF4-201ENST00000217315 C11orf72Q8NBR9 251 aa8.89□□□□□ -0.99
TM9SF4-201ENST00000217315 LAMTOR3Q9UHA4 124 aa8.89□□□□□ -0.99
TM9SF4-201ENST00000217315 CDC42SE2Q9NRR3 84 aa8.88□□□□□ -0.99
TM9SF4-201ENST00000217315 Q8N2B8 174 aa8.88□□□□□ -0.99
TM9SF4-201ENST00000217315 Q9HAA7 133 aa8.88□□□□□ -0.99
TM9SF4-201ENST00000217315 HELZ2Q9BYK8 2649 aaKnown RBP8.88□□□□□ -0.99
TM9SF4-201ENST00000217315 MRPL23Q16540 153 aaKnown RBP8.88□□□□□ -0.99
TM9SF4-201ENST00000217315 SPANXDQ9BXN6 97 aa8.87□□□□□ -0.99
TM9SF4-201ENST00000217315 SPANXCQ9NY87 97 aa8.87□□□□□ -0.99
TM9SF4-201ENST00000217315 TEX15Q9BXT5 2789 aa8.87□□□□□ -0.99
TM9SF4-201ENST00000217315 ZNF561-AS1K7EIQ3 104 aa8.87□□□□□ -0.99
TM9SF4-201ENST00000217315 IGLV1-51P01701 117 aa8.87□□□□□ -0.99
TM9SF4-201ENST00000217315 LINC00269Q8N2A0 174 aa8.87□□□□□ -0.99
TM9SF4-201ENST00000217315 TRAV26-1A0A087WT03 109 aa8.86□□□□□ -0.99
TM9SF4-201ENST00000217315 ASH1LQ9NR48 2969 aaKnown RBP8.86□□□□□ -0.99
TM9SF4-201ENST00000217315 LY6G6DO95868 133 aa8.86□□□□□ -0.99
TM9SF4-201ENST00000217315 FSHBP01225 129 aa8.86□□□□□ -0.99
TM9SF4-201ENST00000217315 KLK12Q9UKR0 248 aa8.86□□□□□ -0.99
TM9SF4-201ENST00000217315 ITPR1Q14643 2758 aa8.85□□□□□ -0.99
TM9SF4-201ENST00000217315 LECT2O14960 151 aa8.85□□□□□ -0.99
TM9SF4-201ENST00000217315 HIST1H4AP62805 103 aaKnown RBP8.85□□□□□ -0.99
TM9SF4-201ENST00000217315 DEFB121Q5J5C9 76 aa8.85□□□□□ -0.99
TM9SF4-201ENST00000217315 F8P00451 2351 aa8.85□□□□□ -0.99
TM9SF4-201ENST00000217315 A0A096LNT2 108 aa8.85□□□□□ -0.99
TM9SF4-201ENST00000217315 SMIM1B2RUZ4 78 aa8.85□□□□□ -0.99
TM9SF4-201ENST00000217315 CHD6Q8TD26 2715 aa8.85□□□□□ -0.99
TM9SF4-201ENST00000217315 TIMM17BO60830 172 aa8.84□□□□□ -0.99
TM9SF4-201ENST00000217315 ATRQ13535 2644 aa8.84□□□□□ -0.99
TM9SF4-201ENST00000217315 EDA2RQ9HAV5 297 aa8.84□□□□□ -0.99
TM9SF4-201ENST00000217315 H0YGX0 51 aa8.83□□□□□ -1
TM9SF4-201ENST00000217315 IGLV4-60A0A075B6I1 120 aa8.82□□□□□ -1
TM9SF4-201ENST00000217315 H7C423 109 aa8.82□□□□□ -1
TM9SF4-201ENST00000217315 HRNRQ86YZ3 2850 aaPredicted RBP8.82□□□□□ -1
TM9SF4-201ENST00000217315 ZANQ9Y493 2812 aa8.82□□□□□ -1
TM9SF4-201ENST00000217315 SMIM9A6NGZ8 99 aa8.81□□□□□ -1
TM9SF4-201ENST00000217315 XGP55808 180 aa8.81□□□□□ -1
TM9SF4-201ENST00000217315 SPAG11BQ08648 103 aa8.81□□□□□ -1
TM9SF4-201ENST00000217315 SPATA25Q9BR10 227 aa8.81□□□□□ -1
TM9SF4-201ENST00000217315 LST1O00453 97 aa8.81□□□□□ -1
TM9SF4-201ENST00000217315 REG3AQ06141 175 aa8.81□□□□□ -1
TM9SF4-201ENST00000217315 NTM-AS1Q6ZSK4 140 aa8.8□□□□□ -1
TM9SF4-201ENST00000217315 LINC00959A0A1B0GUT2 108 aa8.8□□□□□ -1
TM9SF4-201ENST00000217315 CHCHD10Q8WYQ3 142 aaPredicted RBP8.8□□□□□ -1
TM9SF4-201ENST00000217315 ORMDL1Q9P0S3 153 aa8.8□□□□□ -1
TM9SF4-201ENST00000217315 LYRM9A8MSI8 78 aa8.8□□□□□ -1
TM9SF4-201ENST00000217315 IBA57-AS1B1ANH7 110 aa8.79□□□□□ -1
TM9SF4-201ENST00000217315 NCR3O14931 201 aa8.79□□□□□ -1
TM9SF4-201ENST00000217315 FHL2Q14192 279 aa8.79□□□□□ -1
TM9SF4-201ENST00000217315 CSDC2Q9Y534 153 aaKnown RBP8.79□□□□□ -1
TM9SF4-201ENST00000217315 B5MCH6 92 aa8.78□□□□□ -1
TM9SF4-201ENST00000217315 FHL3Q13643 280 aa8.78□□□□□ -1
TM9SF4-201ENST00000217315 IGKV2D-24A0A075B6R9 120 aa8.78□□□□□ -1
TM9SF4-201ENST00000217315 IGHV4-28A0A0C4DH34 117 aa8.78□□□□□ -1
TM9SF4-201ENST00000217315 SMCPP49901 116 aaPredicted RBP8.78□□□□□ -1
TM9SF4-201ENST00000217315 GHRHP01286 108 aa8.78□□□□□ -1
TM9SF4-201ENST00000217315 LINC00526Q96FQ7 95 aa8.78□□□□□ -1
TM9SF4-201ENST00000217315 ACYP1P07311 99 aa8.77□□□□□ -1
TM9SF4-201ENST00000217315 CLUHP3Q96NS8 147 aa8.77□□□□□ -1
TM9SF4-201ENST00000217315 PRO0461Q9UI25 63 aa8.77□□□□□ -1
TM9SF4-201ENST00000217315 C16orf95Q9H693 158 aa8.77□□□□□ -1.01
TM9SF4-201ENST00000217315 CAMK2N2Q96S95 79 aa8.77□□□□□ -1.01
TM9SF4-201ENST00000217315 SLPIP03973 132 aa8.76□□□□□ -1.01
TM9SF4-201ENST00000217315 MRAPQ8TCY5 172 aa8.76□□□□□ -1.01
TM9SF4-201ENST00000217315 TMEM126AQ9H061 195 aa8.76□□□□□ -1.01
TM9SF4-201ENST00000217315 C14orf132Q9NPU4 83 aa8.76□□□□□ -1.01
TM9SF4-201ENST00000217315 CXCL5P42830 114 aa8.76□□□□□ -1.01
TM9SF4-201ENST00000217315 CCL18P55774 89 aa8.76□□□□□ -1.01
TM9SF4-201ENST00000217315 DPH3Q96FX2 82 aa8.75□□□□□ -1.01
TM9SF4-201ENST00000217315 C1orf43Q9BWL3 253 aa8.75□□□□□ -1.01
TM9SF4-201ENST00000217315 FAM110AQ9BQ89 295 aa8.75□□□□□ -1.01
TM9SF4-201ENST00000217315 DCHS2Q6V1P9 2916 aa8.74□□□□□ -1.01
TM9SF4-201ENST00000217315 IGKV3D-7A0A0C4DH55 119 aa8.74□□□□□ -1.01
TM9SF4-201ENST00000217315 TRACP01848 142 aa8.74□□□□□ -1.01
TM9SF4-201ENST00000217315 FAM236AA0A1B0GUQ0 79 aa8.74□□□□□ -1.01
TM9SF4-201ENST00000217315 FAM236BA0A1B0GV22 79 aa8.74□□□□□ -1.01
TM9SF4-201ENST00000217315 RNF183Q96D59 192 aa8.74□□□□□ -1.01
TM9SF4-201ENST00000217315 CRYBG3Q68DQ2 2970 aa8.74□□□□□ -1.01
TM9SF4-201ENST00000217315 SMIM11BQ8TCY0 68 aa8.74□□□□□ -1.01
TM9SF4-201ENST00000217315 RPL18AQ02543 176 aaKnown RBP8.73□□□□□ -1.01
TM9SF4-201ENST00000217315 HAMPP81172 84 aa8.73□□□□□ -1.01
TM9SF4-201ENST00000217315 HIGD2BQ4VC39 106 aa8.73□□□□□ -1.01
TM9SF4-201ENST00000217315 C9orf153Q5TBE3 101 aa8.73□□□□□ -1.01
TM9SF4-201ENST00000217315 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.73□□□□□ -1.01
TM9SF4-201ENST00000217315 UBL5Q9BZL1 73 aa8.73□□□□□ -1.01
TM9SF4-201ENST00000217315 SMG1Q96Q15 3661 aaKnown RBP8.73□□□□□ -1.01
TM9SF4-201ENST00000217315 MIFP14174 115 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms