RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Klhdc1Q80YG3 406 aa20.26■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Ms4a6bQ99N09 244 aa20.26■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Cml1Q9JIZ0 222 aa20.26■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Chd8Q09XV5 2582 aaKnown RBP20.26■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Csmd1Q923L3 3564 aa20.26■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Olfr1436A0PK57 315 aa20.25■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Gm15557A6PWY0 234 aa20.25■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Trav15-1-dv6-1Q5R1D2 117 aa20.25■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Msrb3Q8BU85 253 aa20.25■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Derl1Q99J56 251 aa20.25■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Vmn1r46Q9EQ45 309 aa20.25■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Cldn1O88551 211 aa20.24■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Tppp2Q0P5Y3 170 aa20.24■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Olfr149Q60888 311 aa20.24■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Mob4Q6PEB6 225 aa20.24■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Minos1Q7TNS2 76 aa20.24■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Habp2Q8K0D2 558 aa20.24■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Pfdn2O70591 154 aa20.24■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Phxr2P15972 65 aa20.24■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Samd5Q3V1H9 173 aa20.24■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Gm5819E9PZ96 154 aa20.23■□□□□ 0.83
Tpm1-216ENSMUST00000113707 ColqO35348 457 aa20.23■□□□□ 0.83
Tpm1-216ENSMUST00000113707 P01748 117 aa20.23■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Sumo1P63166 101 aaKnown RBP20.23■□□□□ 0.83
Tpm1-216ENSMUST00000113707 SeleQ00690 612 aa20.23■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Olfr823Q7TRH2 315 aa20.23■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Olfr824Q8VFU4 315 aa20.23■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Olfr1413Q8VGU3 323 aa20.23■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Anapc16Q9CPV2 110 aa20.23■□□□□ 0.83
Tpm1-216ENSMUST00000113707 LystP97412 3788 aa20.23■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Sptbn1Q62261 2363 aaKnown RBP20.22■□□□□ 0.83
Tpm1-216ENSMUST00000113707 BC030500E9Q6W0 185 aa20.22■□□□□ 0.83
Tpm1-216ENSMUST00000113707 P03980 138 aa20.22■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Olfr148Q60887 310 aa20.22■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Rasl11aQ6IMB1 242 aa20.22■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Gm12689Q8BQU9 117 aa20.22■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Eda2rQ8BX35 297 aa20.22■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Abca12E9Q876 2595 aa20.22■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Mettl8A2AUU0 281 aa20.22■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Gm6904E9PVF1 202 aa20.22■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Defa-rs1P17533 116 aa20.22■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Fam173aQ501J2 229 aa20.22■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Zfand2bQ91X58 257 aa20.22■□□□□ 0.83
Tpm1-216ENSMUST00000113707 ArtnQ9Z0L2 224 aa20.22■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Trav9-1A0A075B601 112 aa20.21■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Foxh1O88621 401 aa20.21■□□□□ 0.83
Tpm1-216ENSMUST00000113707 P01792 123 aa20.21■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Fabp6P51162 128 aa20.21■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Rab5bP61021 215 aa20.21■□□□□ 0.83
Tpm1-216ENSMUST00000113707 GchfrP99025 84 aa20.21■□□□□ 0.83
Tpm1-216ENSMUST00000113707 2810408A11RikQ6NSU2 435 aa20.21■□□□□ 0.83
Tpm1-216ENSMUST00000113707 Ighv5-16A0A0B4J1P4 117 aa20.2■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Olfr872E9PVW2 323 aa20.2■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Gm5294J3QP53 216 aa20.2■□□□□ 0.82
Tpm1-216ENSMUST00000113707 P04219 140 aa20.2■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Mfge8P21956 463 aaKnown RBP20.2■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Olfr15P23275 312 aa20.2■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Ypel3P61237 119 aa20.2■□□□□ 0.82
Tpm1-216ENSMUST00000113707 5730522E02RikQ5SP45 163 aa20.2■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Slc36a4Q8CH36 500 aa20.2■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Cxcl14Q9WUQ5 99 aa20.2■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Ighv1-58A0A075B5W9 117 aa20.2■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Scgb1b12A0A087WP21 93 aa20.2■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Gm15293D3YX02 93 aa20.2■□□□□ 0.82
Tpm1-216ENSMUST00000113707 1700056E22RikF7CNM6 234 aa20.2■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Tnfsf11O35235 316 aa20.2■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Myod1P10085 318 aa20.2■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Gls2Q571F8 602 aa20.2■□□□□ 0.82
Tpm1-216ENSMUST00000113707 4922502D21RikQ8C634 189 aa20.2■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Pitpnc1Q8K4R4 332 aa20.2■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Olfr1440Q8VFV4 315 aa20.2■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Gatad1Q920S3 266 aa20.2■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Tmem210Q9D2F0 147 aa20.2■□□□□ 0.82
Tpm1-216ENSMUST00000113707 ManbalQ9D8X0 85 aa20.2■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Olfr709-ps1A0A140T8J9 307 aa20.19■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Rsg1A2A825 258 aa20.19■□□□□ 0.82
Tpm1-216ENSMUST00000113707 1700067P10RikG3X8U2 183 aa20.19■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Edn1P22387 202 aa20.19■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Zim1Q8C393 579 aa20.19■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Rgs13Q8K443 158 aa20.19■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Ighv1-77A0A0G2JGS9 117 aa20.18■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Gm15140A2BEE3 237 aa20.18■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Ceacam12Q3UKP4 300 aa20.18■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Sox21Q811W0 276 aa20.18■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Rbmxl1Q91VM5 388 aaKnown RBP20.18■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Ctnnbip1Q9JJN6 81 aa20.18■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Trappc2lQ9JME7 139 aa20.18■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Gm9195A0A140LHT4 2805 aa20.18■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Txn2P97493 166 aa20.18■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Q9CX63 252 aa20.18■□□□□ 0.82
Tpm1-216ENSMUST00000113707 RetnlaQ9EP95 111 aa20.18■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Rplp1P47955 114 aa20.17■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Crip1P63254 77 aa20.17■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Hist1h1tQ07133 208 aa20.17■□□□□ 0.82
Tpm1-216ENSMUST00000113707 V1rd19Q3KNP5 305 aa20.17■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Olfr1441Q8VFV3 318 aa20.17■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Olfr33Q8VGX7 318 aa20.17■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Olfr159Q9QZ19 319 aa20.17■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Gm44501A8R0T9 150 aa20.16■□□□□ 0.82
Tpm1-216ENSMUST00000113707 Rps10P63325 165 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 83.9 ms