RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Ccl6P27784 116 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Gm4894Q8CA09 118 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Mrpl36Q99N90 102 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Ighv1-81A0A075B5Y4 117 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Igkv6-23A0A140T8N5 115 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Ifitm5O88728 134 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Bhlha15Q9QYC3 197 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Crybg1A0A0G2JG52 2065 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Igkv13-85A0A075B666 115 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 A0A1Y7VMQ4 148 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Loxl2P58022 776 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Repin1Q5U4E2 545 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Cd200r1Q9ES57 326 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Trav6d-3A0A075B6B3 112 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Gm10020E9QAZ2 204 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Itgb1bp1O35671 200 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Gm10912Q3UXH0 145 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Trav6-3Q5R1E6 112 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Olfr1380Q7TQT5 311 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Psg22Q810J1 475 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Rpl15Q9CZM2 204 aaKnown RBP9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Ndufa11Q9D8B4 141 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Dock7Q8R1A4 2130 aaKnown RBP9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Gm10130F6ZHM5 101 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Klk1b22P15948 259 aa9.12□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Tcrg-V4A0A0B4J1J8 138 aa9.11□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Otx1P80205 355 aa9.11□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Ccl12Q62401 104 aa9.11□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Srsf7Q8BL97 267 aaKnown RBP9.11□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Znf22Q9ERU3 237 aa9.11□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Nat6Q9R123 314 aa9.11□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Q91WE4 72 aa9.11□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Supt4h1aP63271 117 aa9.11□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Q8CF25 301 aa9.11□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Olfr1323Q8VF35 309 aa9.11□□□□□ -0.95
Scn8a-203ENSMUST00000108908 HilpdaQ9JLS0 64 aa9.11□□□□□ -0.95
Scn8a-203ENSMUST00000108908 NdpP48744 131 aa9.11□□□□□ -0.95
Scn8a-203ENSMUST00000108908 NrepQ07475 68 aa9.11□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Znf474Q6V5K9 347 aa9.11□□□□□ -0.95
Scn8a-203ENSMUST00000108908 V1ra8Q9EQ48 279 aa9.11□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Il3raP26952 396 aa9.11□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Cops9Q3U898 57 aa9.11□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Cd5lQ9QWK4 352 aa9.11□□□□□ -0.95
Scn8a-203ENSMUST00000108908 EsdQ9R0P3 282 aa9.11□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Trav4-2A0A075B638 110 aa9.11□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Ascl2O35885 263 aa9.11□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Gm29644A0A087WPG2 191 aa9.1□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Gm13030A2APQ6 143 aa9.1□□□□□ -0.95
Scn8a-203ENSMUST00000108908 SeleQ00690 612 aa9.1□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Umad1E0CX23 159 aa9.1□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Thy1P01831 162 aa9.1□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Trbv1A0A0B4J1G7 116 aa9.1□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Ighv1-76A0A0G2JFE9 117 aa9.1□□□□□ -0.95
Scn8a-203ENSMUST00000108908 TbpP29037 316 aa9.1□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Fam162bQ9CX19 157 aa9.1□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Prss22Q9ER10 306 aa9.1□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Frem1Q684R7 2191 aa9.1□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Spink1P09036 80 aa9.1□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Mllt11P97783 90 aa9.1□□□□□ -0.95
Scn8a-203ENSMUST00000108908 UngP97931 306 aa9.1□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Igkv14-130A0A0G2JF45 117 aa9.1□□□□□ -0.95
Scn8a-203ENSMUST00000108908 P04946 108 aa9.1□□□□□ -0.95
Scn8a-203ENSMUST00000108908 FancmQ8BGE5 2021 aa9.1□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Ighv1-26A0A075B5V0 117 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Ighv1-15A0A0A6YXA5 117 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Tmprss12Q3V0Q7 336 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Tnrc6aQ3UHK8 1896 aaKnown RBP9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Trav6n-5A0A075B621 112 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Trav6-5A0A075B6B5 112 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Gstp2P46425 210 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Tmem177Q8BPE4 311 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Amn1B8JKV0 258 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Ly6c1P0CW02 131 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Mrps21P58059 87 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Mrpl20Q9CQL4 149 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Trbv31A0A075B5J5 111 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Scgb1b19F6WYW0 93 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 1700020N15RikL7MTX3 112 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Gm10384Q3UQ87 92 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 GlmpQ9JHJ3 404 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Med13Q5SWW4 2171 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Ighv1-31A0A0A6YWK5 117 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Olfr748E9Q9Z0 307 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Saxo2Q8BQB6 394 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Fam241aQ9CZL2 131 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Dnajc13D4AFX7 2248 aaKnown RBP9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Gm35549A0A0N4SUS7 141 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Ucp1P12242 307 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 3110018I06RikQ9CXS0 120 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Mrps11Q9DCA2 191 aaKnown RBP9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Dkk2Q9QYZ8 259 aa9.09□□□□□ -0.95
Scn8a-203ENSMUST00000108908 Ighv5-12-4A0A0A6YWG4 117 aa9.08□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Zfp648D3Z0W3 525 aa9.08□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Cox6b1P56391 86 aaKnown RBP9.08□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Dnase2P56542 353 aa9.08□□□□□ -0.96
Scn8a-203ENSMUST00000108908 D130052B06RikQ3UW13 202 aa9.08□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Tcrg-V6A0A075B5Y8 134 aa9.08□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Trbv13-3A0A0B4J1H2 113 aa9.08□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Wfdc11A2A5H7 82 aa9.08□□□□□ -0.96
Scn8a-203ENSMUST00000108908 Fbxl7Q5BJ29 491 aa9.08□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 52.6 ms