RNA–Protein interactions for RNA: ENSMUST00000039280.7

Scaf4-201, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Scaf4, Length 4,165 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-201ENSMUST00000039280 Higd1bQ99JY6 98 aa12.37□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Ssbp1Q9CYR0 152 aaKnown RBP12.37□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Timm10bQ9WV96 100 aa12.37□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Nkx3-1P97436 237 aa12.37□□□□□ -0.43
Scaf4-201ENSMUST00000039280 V1rd19Q3KNP5 305 aa12.37□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Eda2rQ8BX35 297 aa12.37□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Habp2Q8K0D2 558 aa12.37□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Ube2l6Q9QZU9 153 aa12.37□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Col12a1Q60847 3120 aa12.37□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Efnb3O35393 340 aa12.37□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Brs3O54798 399 aa12.37□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Il3raP26952 396 aa12.37□□□□□ -0.43
Scaf4-201ENSMUST00000039280 SelenotP62342 195 aa12.37□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Igkv19-93A0A0G2JFZ3 115 aa12.36□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Defa-rs7P50715 91 aa12.36□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Olfr1178Q7TR20 323 aa12.36□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Ammecr1lQ8JZZ6 310 aa12.36□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Scnm1Q8K136 229 aa12.36□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Olfr1441Q8VFV3 318 aa12.36□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Znf329Q6GQR8 522 aa12.36□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Znf787Q8BIF9 381 aa12.36□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Mob3bQ8VE04 216 aa12.36□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Olfr1323Q8VF35 309 aa12.36□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Leprotl1Q9CQ74 131 aa12.36□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Tmem219Q9D123 240 aa12.36□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Rnase6Q9D244 153 aa12.36□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Vmn1r61W4VSP5 300 aa12.36□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Gm21974F6W3F3 119 aa12.36□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Trbv19A0A0B4J1H4 117 aa12.35□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Ypel3P61237 119 aa12.35□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Fam222bQ6P539 562 aa12.35□□□□□ -0.43
Scaf4-201ENSMUST00000039280 OstcQ78XF5 149 aa12.35□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Olfr411Q7TRW8 315 aa12.35□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Insig2Q91WG1 225 aa12.35□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Gm10020E9QAZ2 204 aa12.35□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Olfr523Q8VFE7 317 aa12.35□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Olfr1256Q8VGP1 306 aa12.35□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Plrg1Q922V4 513 aaKnown RBP12.35□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Rpl15Q9CZM2 204 aaKnown RBP12.35□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Lypd8Q9D7S0 255 aa12.35□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Gtsf1Q9DAN6 167 aa12.35□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Gm20458E9PXJ7 78 aa12.35□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Gm10271F6WY25 52 aa12.35□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Sub1P11031 127 aaKnown RBP12.35□□□□□ -0.43
Scaf4-201ENSMUST00000039280 GaptQ8CB93 157 aa12.35□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Bpifa5Q9CQX3 270 aa12.35□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Ighv1-15A0A0A6YXA5 117 aa12.34□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Gm21775J3KMK6 180 aa12.34□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Gm5426J3QNM7 103 aa12.34□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Slc16a4Q8R0M8 500 aa12.34□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Mrpl20Q9CQL4 149 aa12.34□□□□□ -0.43
Scaf4-201ENSMUST00000039280 GgctQ9D7X8 188 aa12.34□□□□□ -0.43
Scaf4-201ENSMUST00000039280 1700008P02RikQ9DAJ8 175 aa12.34□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Gm13030A2APQ6 143 aa12.34□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Olfr1024A2ASU7 327 aa12.34□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Olfr1331K7N684 317 aa12.34□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Defa-rs2P17534 91 aa12.34□□□□□ -0.43
Scaf4-201ENSMUST00000039280 AsipQ03288 131 aa12.34□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Olfr1333Q7TQV7 317 aa12.34□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Tm2d1Q99MB3 208 aa12.34□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Mapk1ip1Q9D7G9 263 aa12.34□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Crim1Q9JLL0 1037 aa12.34□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Chd7A2AJK6 2986 aaKnown RBP12.34□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Gm20825J3QM67 227 aa12.33□□□□□ -0.43
Scaf4-201ENSMUST00000039280 P18525 117 aa12.33□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Col8a2P25318 699 aa12.33□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Dnajc30P59041 219 aa12.33□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Ssty2Q149W4 227 aa12.33□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Gm21394Q497R7 227 aa12.33□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Gm20854Q62461 227 aa12.33□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Rnf115Q9D0C1 305 aa12.33□□□□□ -0.43
Scaf4-201ENSMUST00000039280 Trav23A0A0G2JG17 115 aa12.33□□□□□ -0.44
Scaf4-201ENSMUST00000039280 Znrd1Q791N7 123 aa12.33□□□□□ -0.44
Scaf4-201ENSMUST00000039280 Rtn4rl2Q7M6Z0 420 aa12.33□□□□□ -0.44
Scaf4-201ENSMUST00000039280 Try10Q792Z1 246 aaKnown RBP12.33□□□□□ -0.44
Scaf4-201ENSMUST00000039280 Cphx2Q8BX39 182 aa12.33□□□□□ -0.44
Scaf4-201ENSMUST00000039280 Znhit3Q9CQK1 151 aa12.33□□□□□ -0.44
Scaf4-201ENSMUST00000039280 Rab9aQ9R0M6 201 aa12.33□□□□□ -0.44
Scaf4-201ENSMUST00000039280 Gm26920S4R2A5 56 aa12.33□□□□□ -0.44
Scaf4-201ENSMUST00000039280 Trav6d-3A0A075B6B3 112 aa12.33□□□□□ -0.44
Scaf4-201ENSMUST00000039280 Olfr912A0A1L1SSS5 310 aa12.33□□□□□ -0.44
Scaf4-201ENSMUST00000039280 Trav6-3Q5R1E6 112 aa12.33□□□□□ -0.44
Scaf4-201ENSMUST00000039280 Cox19Q8K0C8 92 aa12.33□□□□□ -0.44
Scaf4-201ENSMUST00000039280 Olfr958Q8VEY3 312 aa12.33□□□□□ -0.44
Scaf4-201ENSMUST00000039280 Gm27027S4R1M6 97 aa12.33□□□□□ -0.44
Scaf4-201ENSMUST00000039280 eef1akmt3D3YWP0 232 aa12.32□□□□□ -0.44
Scaf4-201ENSMUST00000039280 P01723 117 aa12.32□□□□□ -0.44
Scaf4-201ENSMUST00000039280 Klk1b22P15948 259 aa12.32□□□□□ -0.44
Scaf4-201ENSMUST00000039280 Plpp2Q9DAX2 276 aa12.32□□□□□ -0.44
Scaf4-201ENSMUST00000039280 Smim13E9Q942 88 aa12.32□□□□□ -0.44
Scaf4-201ENSMUST00000039280 F2rl1P55086 399 aa12.32□□□□□ -0.44
Scaf4-201ENSMUST00000039280 RprmlQ3URD2 117 aa12.32□□□□□ -0.44
Scaf4-201ENSMUST00000039280 Gm10190Q8BSD7 107 aa12.32□□□□□ -0.44
Scaf4-201ENSMUST00000039280 Dopey2Q3UHQ6 2295 aa12.32□□□□□ -0.44
Scaf4-201ENSMUST00000039280 Gm21900J3QP38 180 aa12.32□□□□□ -0.44
Scaf4-201ENSMUST00000039280 Ascl2O35885 263 aa12.32□□□□□ -0.44
Scaf4-201ENSMUST00000039280 CstadQ9D245 104 aa12.32□□□□□ -0.44
Scaf4-201ENSMUST00000039280 OtoglF7A4A7 2325 aa12.31□□□□□ -0.44
Scaf4-201ENSMUST00000039280 Ighv7-4A0A0A6YXL5 121 aa12.31□□□□□ -0.44
Scaf4-201ENSMUST00000039280 Tnfsf11O35235 316 aa12.31□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms