RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Ap5s1Q9D742 170 aa12.89□□□□□ -0.35
Trim54-201ENSMUST00000013771 Cyb5r3Q9DCN2 301 aaKnown RBP12.89□□□□□ -0.35
Trim54-201ENSMUST00000013771 Trbv13-3A0A0B4J1H2 113 aa12.88□□□□□ -0.35
Trim54-201ENSMUST00000013771 Ctxnd1A0A1B0GST9 59 aa12.88□□□□□ -0.35
Trim54-201ENSMUST00000013771 Irf2bp2E9Q1P8 570 aa12.88□□□□□ -0.35
Trim54-201ENSMUST00000013771 Ren2P00796 401 aa12.88□□□□□ -0.35
Trim54-201ENSMUST00000013771 Ubald1Q6P3B2 176 aa12.88□□□□□ -0.35
Trim54-201ENSMUST00000013771 Commd9Q8K2Q0 198 aa12.88□□□□□ -0.35
Trim54-201ENSMUST00000013771 Vstm2aQ8R0A6 236 aa12.88□□□□□ -0.35
Trim54-201ENSMUST00000013771 Rab31Q921E2 194 aa12.88□□□□□ -0.35
Trim54-201ENSMUST00000013771 Sfxn4Q925N1 313 aa12.88□□□□□ -0.35
Trim54-201ENSMUST00000013771 Q9CQT9 129 aa12.88□□□□□ -0.35
Trim54-201ENSMUST00000013771 Scp2d1Q9DAH1 156 aa12.88□□□□□ -0.35
Trim54-201ENSMUST00000013771 Gpr132Q9Z282 382 aa12.88□□□□□ -0.35
Trim54-201ENSMUST00000013771 Fras1Q80T14 4010 aa12.88□□□□□ -0.35
Trim54-201ENSMUST00000013771 Ighv1-69A0A0G2JFS5 117 aa12.88□□□□□ -0.35
Trim54-201ENSMUST00000013771 Scgb1b24B1B0N6 92 aa12.88□□□□□ -0.35
Trim54-201ENSMUST00000013771 Gm16519F8VQK7 162 aa12.88□□□□□ -0.35
Trim54-201ENSMUST00000013771 Psmb6Q60692 238 aa12.88□□□□□ -0.35
Trim54-201ENSMUST00000013771 H2-M10.6Q85ZW5 330 aa12.88□□□□□ -0.35
Trim54-201ENSMUST00000013771 Olfr860Q8VFF7 317 aa12.88□□□□□ -0.35
Trim54-201ENSMUST00000013771 Acaa1aQ921H8 424 aaKnown RBP12.88□□□□□ -0.35
Trim54-201ENSMUST00000013771 Map1lc3bQ9CQV6 125 aa12.88□□□□□ -0.35
Trim54-201ENSMUST00000013771 Csmd3Q80T79 3707 aa12.87□□□□□ -0.35
Trim54-201ENSMUST00000013771 Iglv1A0A075B663 117 aa12.87□□□□□ -0.35
Trim54-201ENSMUST00000013771 Trbv12-2A0A0B4J1H1 124 aa12.87□□□□□ -0.35
Trim54-201ENSMUST00000013771 1700015F17RikD3YUK8 150 aa12.87□□□□□ -0.35
Trim54-201ENSMUST00000013771 Inafm1E9PV59 130 aa12.87□□□□□ -0.35
Trim54-201ENSMUST00000013771 E430018J23RikE9PZQ8 461 aa12.87□□□□□ -0.35
Trim54-201ENSMUST00000013771 Gm10553J3QPF1 123 aa12.87□□□□□ -0.35
Trim54-201ENSMUST00000013771 Rnf5O35445 180 aa12.87□□□□□ -0.35
Trim54-201ENSMUST00000013771 RhogP84096 191 aa12.87□□□□□ -0.35
Trim54-201ENSMUST00000013771 Gm21748Q3UE70 102 aa12.87□□□□□ -0.35
Trim54-201ENSMUST00000013771 Arrdc5Q497K5 325 aa12.87□□□□□ -0.35
Trim54-201ENSMUST00000013771 Jpt2Q6PGH2 190 aaKnown RBP12.87□□□□□ -0.35
Trim54-201ENSMUST00000013771 Olfr211Q8VGH2 309 aa12.87□□□□□ -0.35
Trim54-201ENSMUST00000013771 Tmem107Q9CPV0 140 aa12.87□□□□□ -0.35
Trim54-201ENSMUST00000013771 Tctex1d1Q9D5I4 173 aa12.87□□□□□ -0.35
Trim54-201ENSMUST00000013771 Fam210bQ9D8B6 190 aa12.87□□□□□ -0.35
Trim54-201ENSMUST00000013771 Ighv7-3A0A075B5R2 120 aa12.86□□□□□ -0.35
Trim54-201ENSMUST00000013771 Ighv1-19A0A0A6YWX0 117 aa12.86□□□□□ -0.35
Trim54-201ENSMUST00000013771 Pglyrp3A1A547 347 aa12.86□□□□□ -0.35
Trim54-201ENSMUST00000013771 Olfr1124A2AT86 318 aa12.86□□□□□ -0.35
Trim54-201ENSMUST00000013771 Frrs1lB1AXV0 293 aa12.86□□□□□ -0.35
Trim54-201ENSMUST00000013771 Olfr913E9Q716 312 aa12.86□□□□□ -0.35
Trim54-201ENSMUST00000013771 Ly6lH3BJG9 140 aa12.86□□□□□ -0.35
Trim54-201ENSMUST00000013771 P01728 117 aa12.86□□□□□ -0.35
Trim54-201ENSMUST00000013771 NfybP63139 207 aa12.86□□□□□ -0.35
Trim54-201ENSMUST00000013771 Vkorc1l1Q6TEK5 176 aa12.86□□□□□ -0.35
Trim54-201ENSMUST00000013771 Olfr1371Q7TQT7 311 aa12.86□□□□□ -0.35
Trim54-201ENSMUST00000013771 Iba57Q8CAK1 358 aaKnown RBP12.86□□□□□ -0.35
Trim54-201ENSMUST00000013771 Nit1Q8VDK1 323 aa12.86□□□□□ -0.35
Trim54-201ENSMUST00000013771 Mob3bQ8VE04 216 aa12.86□□□□□ -0.35
Trim54-201ENSMUST00000013771 Olfr480Q8VEZ0 312 aa12.86□□□□□ -0.35
Trim54-201ENSMUST00000013771 Rab27bQ99P58 218 aa12.86□□□□□ -0.35
Trim54-201ENSMUST00000013771 Sult1b1Q9QWG7 299 aa12.86□□□□□ -0.35
Trim54-201ENSMUST00000013771 Vax2Q9WTP9 292 aa12.86□□□□□ -0.35
Trim54-201ENSMUST00000013771 BC053393A0A0B4J1F6 192 aa12.85□□□□□ -0.35
Trim54-201ENSMUST00000013771 Fcrl6A1YIY0 268 aa12.85□□□□□ -0.35
Trim54-201ENSMUST00000013771 Scgb1b29D2XZ31 93 aa12.85□□□□□ -0.35
Trim54-201ENSMUST00000013771 Scgb1b20E9PWZ2 93 aa12.85□□□□□ -0.35
Trim54-201ENSMUST00000013771 Gm37240E9QAY5 252 aa12.85□□□□□ -0.35
Trim54-201ENSMUST00000013771 Ifitm7G3X9Z2 141 aa12.85□□□□□ -0.35
Trim54-201ENSMUST00000013771 Gm21244J3QK38 227 aa12.85□□□□□ -0.35
Trim54-201ENSMUST00000013771 Bmpr1bP36898 502 aa12.85□□□□□ -0.35
Trim54-201ENSMUST00000013771 Rhox10Q4TU83 196 aa12.85□□□□□ -0.35
Trim54-201ENSMUST00000013771 C1ql4Q4ZJM9 238 aa12.85□□□□□ -0.35
Trim54-201ENSMUST00000013771 Olfr1336Q8VGH5 314 aa12.85□□□□□ -0.35
Trim54-201ENSMUST00000013771 Cma2Q91VB1 246 aa12.85□□□□□ -0.35
Trim54-201ENSMUST00000013771 Ryr1E9PZQ0 5035 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 Gm20773A0A0A6YXW2 232 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 Gm20807A0A0A6YXX7 232 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 Gm45800A0A1B0GT24 152 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 Gm20873J3QMQ9 232 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 Gm5108J3QP01 101 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 Gm20795J3QP49 232 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 Gm21310J3QQ23 232 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 Ifna5P07349 189 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 ApcsP12246 224 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 Fgf7P36363 194 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 Atp5g2P56383 146 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 Slc45a2P58355 530 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 Gm21440Q3TTD8 232 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 Rnase11Q5GAM9 192 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 Olfr305Q7TS02 319 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 Cbln2Q8BGU2 224 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 Lypd6Q8BPP5 171 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 Gm4894Q8CA09 118 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 Lrrc20Q8CI70 184 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 Olfr1454Q8VFW2 307 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 Mrpl27Q99N92 148 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 Gng10Q9CXP8 68 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 Gm17509Q9CZ61 145 aa12.84□□□□□ -0.35
Trim54-201ENSMUST00000013771 Gm28171A0A087WQ19 227 aa12.83□□□□□ -0.36
Trim54-201ENSMUST00000013771 CenptQ3TJM4 515 aa12.83□□□□□ -0.36
Trim54-201ENSMUST00000013771 Olfr1472Q7TQQ9 314 aa12.83□□□□□ -0.36
Trim54-201ENSMUST00000013771 Olfr1178Q7TR20 323 aa12.83□□□□□ -0.36
Trim54-201ENSMUST00000013771 Mrps26Q80ZS3 200 aa12.83□□□□□ -0.36
Trim54-201ENSMUST00000013771 Poc1aQ8JZX3 405 aa12.83□□□□□ -0.36
Trim54-201ENSMUST00000013771 Olfr513Q8VFZ3 309 aa12.83□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 176 ms