RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 NAP1L6A6NFF2 107 aa0.45□□□□□ -2.34
ATM-228ENST00000639240 ATP6V1G2-DDX39BF2Z307 99 aa0.45□□□□□ -2.34
ATM-228ENST00000639240 HMGN4O00479 90 aa0.45□□□□□ -2.34
ATM-228ENST00000639240 UQCR11O14957 56 aa0.45□□□□□ -2.34
ATM-228ENST00000639240 RBP2P50120 134 aa0.45□□□□□ -2.34
ATM-228ENST00000639240 UBE2D3P61077 147 aa0.45□□□□□ -2.34
ATM-228ENST00000639240 UBE2D2P62837 147 aa0.45□□□□□ -2.34
ATM-228ENST00000639240 FSIP2Q5CZC0 6907 aa0.45□□□□□ -2.34
ATM-228ENST00000639240 SYNE2Q8WXH0 6885 aaKnown RBP0.45□□□□□ -2.34
ATM-228ENST00000639240 GAPVD1Q14C86 1478 aa0.44□□□□□ -2.34
ATM-228ENST00000639240 SHANK2Q9UPX8 1470 aa0.44□□□□□ -2.34
ATM-228ENST00000639240 MUC5ACP98088 5654 aa0.44□□□□□ -2.34
ATM-228ENST00000639240 CACNA1HO95180 2353 aa0.44□□□□□ -2.34
ATM-228ENST00000639240 TRAV30A0A087WSZ9 112 aa0.44□□□□□ -2.34
ATM-228ENST00000639240 F8VRH5 84 aa0.44□□□□□ -2.34
ATM-228ENST00000639240 PRH1P02810 166 aa0.44□□□□□ -2.34
ATM-228ENST00000639240 GNG11P61952 73 aa0.44□□□□□ -2.34
ATM-228ENST00000639240 ACBD7Q8N6N7 88 aa0.44□□□□□ -2.34
ATM-228ENST00000639240 UQCR10Q9UDW1 63 aa0.44□□□□□ -2.34
ATM-228ENST00000639240 LINC01558Q9Y6Z2 57 aa0.44□□□□□ -2.34
ATM-228ENST00000639240 TOP2BQ02880 1626 aa0.44□□□□□ -2.34
ATM-228ENST00000639240 CNTLNQ9NXG0 1405 aa0.44□□□□□ -2.34
ATM-228ENST00000639240 APCP25054 2843 aa0.44□□□□□ -2.34
ATM-228ENST00000639240 KDM5AP29375 1690 aaKnown RBP0.43□□□□□ -2.34
ATM-228ENST00000639240 CTXND1A0A1B0GTU2 59 aa0.43□□□□□ -2.34
ATM-228ENST00000639240 IGLC7A0M8Q6 106 aa0.43□□□□□ -2.34
ATM-228ENST00000639240 APOC3P02656 99 aa0.43□□□□□ -2.34
ATM-228ENST00000639240 KRTDAPP60985 99 aa0.43□□□□□ -2.34
ATM-228ENST00000639240 BAGE2Q86Y30 109 aa0.43□□□□□ -2.34
ATM-228ENST00000639240 UBE2DNLQ8IWF7 75 aa0.43□□□□□ -2.34
ATM-228ENST00000639240 NSD3Q9BZ95 1437 aa0.43□□□□□ -2.34
ATM-228ENST00000639240 ANKRD26Q9UPS8 1709 aa0.43□□□□□ -2.34
ATM-228ENST00000639240 SCN7AQ01118 1682 aa0.43□□□□□ -2.34
ATM-228ENST00000639240 FRAS1Q86XX4 4008 aa0.42□□□□□ -2.34
ATM-228ENST00000639240 FYCO1Q9BQS8 1478 aa0.42□□□□□ -2.34
ATM-228ENST00000639240 BDP1A6H8Y1 2624 aa0.42□□□□□ -2.34
ATM-228ENST00000639240 NUP188Q5SRE5 1749 aa0.42□□□□□ -2.34
ATM-228ENST00000639240 ABCC5O15440 1437 aa0.42□□□□□ -2.34
ATM-228ENST00000639240 TRAV22A0A0B4J277 110 aa0.42□□□□□ -2.34
ATM-228ENST00000639240 CHKB-CPT1BH3BT56 60 aa0.42□□□□□ -2.34
ATM-228ENST00000639240 SFT2D2O95562 160 aa0.42□□□□□ -2.34
ATM-228ENST00000639240 COX6CP09669 75 aa0.42□□□□□ -2.34
ATM-228ENST00000639240 COX6A2Q02221 97 aa0.42□□□□□ -2.34
ATM-228ENST00000639240 Q0VG73 95 aa0.42□□□□□ -2.34
ATM-228ENST00000639240 TMEM170BQ5T4T1 132 aa0.42□□□□□ -2.34
ATM-228ENST00000639240 FAM213BQ8TBF2 198 aa0.42□□□□□ -2.34
ATM-228ENST00000639240 SMR3AQ99954 134 aa0.42□□□□□ -2.34
ATM-228ENST00000639240 LINC00472Q9H8W2 130 aa0.42□□□□□ -2.34
ATM-228ENST00000639240 COL4A6Q14031 1691 aa0.42□□□□□ -2.34
ATM-228ENST00000639240 MDN1Q9NU22 5596 aa0.42□□□□□ -2.34
ATM-228ENST00000639240 PRDM15P57071 1507 aaPredicted RBP0.42□□□□□ -2.34
ATM-228ENST00000639240 TTC28Q96AY4 2481 aa0.42□□□□□ -2.34
ATM-228ENST00000639240 AKAP12Q02952 1782 aa0.42□□□□□ -2.34
ATM-228ENST00000639240 LRP6O75581 1613 aa0.42□□□□□ -2.34
ATM-228ENST00000639240 LAMC1P11047 1609 aa0.42□□□□□ -2.34
ATM-228ENST00000639240 FAM208BQ5VWN6 2430 aa0.42□□□□□ -2.34
ATM-228ENST00000639240 TEX14Q8IWB6 1497 aa0.41□□□□□ -2.34
ATM-228ENST00000639240 CACNA1CQ13936 2221 aa0.41□□□□□ -2.34
ATM-228ENST00000639240 KRTAP2-3P0C7H8 128 aa0.41□□□□□ -2.34
ATM-228ENST00000639240 CNFNQ9BYD5 112 aa0.41□□□□□ -2.34
ATM-228ENST00000639240 KRTAP2-4Q9BYR9 128 aa0.41□□□□□ -2.34
ATM-228ENST00000639240 KRTAP2-1Q9BYU5 128 aa0.41□□□□□ -2.34
ATM-228ENST00000639240 NXT2Q9NPJ8 142 aaKnown RBP0.41□□□□□ -2.34
ATM-228ENST00000639240 PRO1854Q9UHT4 67 aa0.41□□□□□ -2.34
ATM-228ENST00000639240 BTAF1O14981 1849 aa0.41□□□□□ -2.34
ATM-228ENST00000639240 POLQO75417 2590 aa0.4□□□□□ -2.35
ATM-228ENST00000639240 BIVM-ERCC5R4GMW8 1640 aa0.4□□□□□ -2.35
ATM-228ENST00000639240 S100A8P05109 93 aa0.4□□□□□ -2.35
ATM-228ENST00000639240 MGPP08493 103 aa0.4□□□□□ -2.35
ATM-228ENST00000639240 CCNB3Q8WWL7 1395 aa0.4□□□□□ -2.35
ATM-228ENST00000639240 TROQ12816 1431 aaPredicted RBP0.39□□□□□ -2.35
ATM-228ENST00000639240 A0A0D9SFI3 127 aa0.39□□□□□ -2.35
ATM-228ENST00000639240 CRYM-AS1A6NIL9 109 aa0.39□□□□□ -2.35
ATM-228ENST00000639240 ZNF815PA8K554 130 aa0.39□□□□□ -2.35
ATM-228ENST00000639240 NDUFC1O43677 76 aa0.39□□□□□ -2.35
ATM-228ENST00000639240 SNCAP37840 140 aa0.39□□□□□ -2.35
ATM-228ENST00000639240 SSBP3-AS1Q7Z2R9 100 aa0.39□□□□□ -2.35
ATM-228ENST00000639240 SPRR4Q96PI1 79 aa0.39□□□□□ -2.35
ATM-228ENST00000639240 NPVFQ9HCQ7 196 aa0.39□□□□□ -2.35
ATM-228ENST00000639240 MANBALQ9NQG1 85 aa0.39□□□□□ -2.35
ATM-228ENST00000639240 ASXL3Q9C0F0 2248 aa0.39□□□□□ -2.35
ATM-228ENST00000639240 MAGI1Q96QZ7 1491 aaPredicted RBP0.39□□□□□ -2.35
ATM-228ENST00000639240 TNCP24821 2201 aa0.38□□□□□ -2.35
ATM-228ENST00000639240 PDCD11Q14690 1871 aaKnown RBP0.38□□□□□ -2.35
ATM-228ENST00000639240 ADGRL2O95490 1459 aa0.38□□□□□ -2.35
ATM-228ENST00000639240 SPINK6Q6UWN8 80 aa0.38□□□□□ -2.35
ATM-228ENST00000639240 FAIMQ9NVQ4 179 aa0.38□□□□□ -2.35
ATM-228ENST00000639240 AP4S1Q9Y587 144 aa0.38□□□□□ -2.35
ATM-228ENST00000639240 ABCA12Q86UK0 2595 aa0.38□□□□□ -2.35
ATM-228ENST00000639240 ZFHX3Q15911 3703 aa0.37□□□□□ -2.35
ATM-228ENST00000639240 CACNA1EQ15878 2313 aa0.37□□□□□ -2.35
ATM-228ENST00000639240 ERCC6L2Q5T890 1561 aa0.37□□□□□ -2.35
ATM-228ENST00000639240 ABCC10Q5T3U5 1492 aa0.37□□□□□ -2.35
ATM-228ENST00000639240 MLH3Q9UHC1 1453 aa0.37□□□□□ -2.35
ATM-228ENST00000639240 hADV29S1A0JD25 119 aa0.37□□□□□ -2.35
ATM-228ENST00000639240 LINC00032P0C843 101 aa0.37□□□□□ -2.35
ATM-228ENST00000639240 IGLC1P0CG04 106 aa0.37□□□□□ -2.35
ATM-228ENST00000639240 SAA2P0DJI9 122 aaPredicted RBP0.37□□□□□ -2.35
ATM-228ENST00000639240 S100A10P60903 97 aa0.37□□□□□ -2.35
ATM-228ENST00000639240 SEC11AP67812 179 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms