RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 C9orf153Q5TBE3 101 aa10.64□□□□□ -0.71
SCARB2-208ENST00000638372 NFE4Q86UQ8 179 aa10.64□□□□□ -0.71
SCARB2-208ENST00000638372 NRACQ8N912 160 aa10.64□□□□□ -0.71
SCARB2-208ENST00000638372 USP24Q9UPU5 2620 aa10.64□□□□□ -0.71
SCARB2-208ENST00000638372 CDK2AP2O75956 126 aa10.64□□□□□ -0.71
SCARB2-208ENST00000638372 MRPS12O15235 138 aaKnown RBP10.64□□□□□ -0.71
SCARB2-208ENST00000638372 ZNF22P17026 224 aaPredicted RBP10.64□□□□□ -0.71
SCARB2-208ENST00000638372 Q8N976 141 aa10.64□□□□□ -0.71
SCARB2-208ENST00000638372 KLLNB2CW77 178 aa10.64□□□□□ -0.71
SCARB2-208ENST00000638372 LECT2O14960 151 aa10.64□□□□□ -0.71
SCARB2-208ENST00000638372 H0YGX0 51 aa10.63□□□□□ -0.71
SCARB2-208ENST00000638372 LINC00269Q8N2A0 174 aa10.63□□□□□ -0.71
SCARB2-208ENST00000638372 HECTD1Q9ULT8 2610 aa10.62□□□□□ -0.71
SCARB2-208ENST00000638372 TRBV27A0A0K0K1C4 114 aa10.62□□□□□ -0.71
SCARB2-208ENST00000638372 NDUFA1O15239 70 aa10.62□□□□□ -0.71
SCARB2-208ENST00000638372 NCR3O14931 201 aa10.62□□□□□ -0.71
SCARB2-208ENST00000638372 CFAP54Q96N23 3096 aa10.62□□□□□ -0.71
SCARB2-208ENST00000638372 ADAMTS20P59510 1910 aa10.6□□□□□ -0.71
SCARB2-208ENST00000638372 LY6G6DO95868 133 aa10.6□□□□□ -0.71
SCARB2-208ENST00000638372 A8MZ25 164 aa10.6□□□□□ -0.71
SCARB2-208ENST00000638372 CRYGDP07320 174 aa10.6□□□□□ -0.71
SCARB2-208ENST00000638372 MIAQ16674 131 aa10.6□□□□□ -0.71
SCARB2-208ENST00000638372 TET2Q6N021 2002 aaPredicted RBP10.6□□□□□ -0.71
SCARB2-208ENST00000638372 ETDCA0A1B0GVM5 59 aa10.6□□□□□ -0.71
SCARB2-208ENST00000638372 FOXI1Q12951 378 aa10.59□□□□□ -0.71
SCARB2-208ENST00000638372 FAM110AQ9BQ89 295 aa10.59□□□□□ -0.71
SCARB2-208ENST00000638372 SMR3AQ99954 134 aa10.59□□□□□ -0.71
SCARB2-208ENST00000638372 TCL1BO95988 128 aa10.58□□□□□ -0.72
SCARB2-208ENST00000638372 TM2D2Q9BX73 214 aa10.58□□□□□ -0.72
SCARB2-208ENST00000638372 HIGD2BQ4VC39 106 aa10.58□□□□□ -0.72
SCARB2-208ENST00000638372 AGRNO00468 2067 aa10.58□□□□□ -0.72
SCARB2-208ENST00000638372 BPTFQ12830 3046 aa10.58□□□□□ -0.72
SCARB2-208ENST00000638372 UNC80Q8N2C7 3258 aa10.58□□□□□ -0.72
SCARB2-208ENST00000638372 POLR2KP53803 58 aaKnown RBP10.58□□□□□ -0.72
SCARB2-208ENST00000638372 URB1-AS1Q96HZ7 61 aa10.58□□□□□ -0.72
SCARB2-208ENST00000638372 F8P00451 2351 aa10.57□□□□□ -0.72
SCARB2-208ENST00000638372 REG3AQ06141 175 aa10.57□□□□□ -0.72
SCARB2-208ENST00000638372 TRBV6-5A0A0K0K1A5 114 aa10.57□□□□□ -0.72
SCARB2-208ENST00000638372 TMEM223A0PJW6 202 aa10.57□□□□□ -0.72
SCARB2-208ENST00000638372 CNFNQ9BYD5 112 aa10.57□□□□□ -0.72
SCARB2-208ENST00000638372 TRBV10-2A0A0K0K1G8 114 aa10.56□□□□□ -0.72
SCARB2-208ENST00000638372 hADV29S1A0JD25 119 aa10.56□□□□□ -0.72
SCARB2-208ENST00000638372 TSHBP01222 138 aa10.56□□□□□ -0.72
SCARB2-208ENST00000638372 CXCL5P42830 114 aa10.56□□□□□ -0.72
SCARB2-208ENST00000638372 C11orf45Q8TAV5 145 aa10.56□□□□□ -0.72
SCARB2-208ENST00000638372 RBMY1FQ15415 496 aaKnown RBP10.56□□□□□ -0.72
SCARB2-208ENST00000638372 TRBV6-8A0A0A6YYG3 113 aa10.55□□□□□ -0.72
SCARB2-208ENST00000638372 IGKV3D-7A0A0C4DH55 119 aa10.55□□□□□ -0.72
SCARB2-208ENST00000638372 LOC100131303A0A0U1RQF7 123 aa10.55□□□□□ -0.72
SCARB2-208ENST00000638372 PIK3CD-AS1Q5SR53 167 aa10.55□□□□□ -0.72
SCARB2-208ENST00000638372 SMIM9A6NGZ8 99 aa10.55□□□□□ -0.72
SCARB2-208ENST00000638372 MRGPRG-AS1Q2M3A8 158 aa10.55□□□□□ -0.72
SCARB2-208ENST00000638372 C9orf85Q96MD7 179 aa10.55□□□□□ -0.72
SCARB2-208ENST00000638372 BBC3Q96PG8 261 aaPredicted RBP10.55□□□□□ -0.72
SCARB2-208ENST00000638372 C2orf91Q6ZV80 131 aa10.55□□□□□ -0.72
SCARB2-208ENST00000638372 IGHV4-28A0A0C4DH34 117 aa10.54□□□□□ -0.72
SCARB2-208ENST00000638372 HILS1P60008 231 aa10.54□□□□□ -0.72
SCARB2-208ENST00000638372 CHCHD10Q8WYQ3 142 aaPredicted RBP10.54□□□□□ -0.72
SCARB2-208ENST00000638372 LYRM9A8MSI8 78 aa10.54□□□□□ -0.72
SCARB2-208ENST00000638372 TRBV6-4A0A1B0GX49 114 aa10.54□□□□□ -0.72
SCARB2-208ENST00000638372 SPANXCQ9NY87 97 aa10.54□□□□□ -0.72
SCARB2-208ENST00000638372 H3BT86 120 aa10.53□□□□□ -0.72
SCARB2-208ENST00000638372 ODF3L2Q3SX64 289 aa10.53□□□□□ -0.72
SCARB2-208ENST00000638372 TRACP01848 142 aa10.53□□□□□ -0.72
SCARB2-208ENST00000638372 TIRAPP58753 221 aa10.53□□□□□ -0.72
SCARB2-208ENST00000638372 MUC4Q99102 2169 aa10.52□□□□□ -0.73
SCARB2-208ENST00000638372 ACYP1P07311 99 aa10.51□□□□□ -0.73
SCARB2-208ENST00000638372 A0A0B4J2C4 111 aa10.51□□□□□ -0.73
SCARB2-208ENST00000638372 RBX1P62877 108 aa10.51□□□□□ -0.73
SCARB2-208ENST00000638372 DEFB131BA0A096LNP1 70 aa10.51□□□□□ -0.73
SCARB2-208ENST00000638372 B5MCH6 92 aa10.51□□□□□ -0.73
SCARB2-208ENST00000638372 G3V4G9 280 aa10.51□□□□□ -0.73
SCARB2-208ENST00000638372 LINC00308Q8TCZ7 52 aa10.51□□□□□ -0.73
SCARB2-208ENST00000638372 PYGO1Q9Y3Y4 419 aa10.51□□□□□ -0.73
SCARB2-208ENST00000638372 DIRC1Q969H9 104 aa10.5□□□□□ -0.73
SCARB2-208ENST00000638372 XAGE1AQ9HD64 81 aa10.5□□□□□ -0.73
SCARB2-208ENST00000638372 MGAM2Q2M2H8 2515 aa10.49□□□□□ -0.73
SCARB2-208ENST00000638372 LINC00526Q96FQ7 95 aa10.49□□□□□ -0.73
SCARB2-208ENST00000638372 XIRP2A4UGR9 3374 aa10.49□□□□□ -0.73
SCARB2-208ENST00000638372 WDFY4Q6ZS81 3184 aa10.49□□□□□ -0.73
SCARB2-208ENST00000638372 CRIP2P52943 208 aaPredicted RBP10.49□□□□□ -0.73
SCARB2-208ENST00000638372 FUSP35637 526 aaKnown RBP eCLIP10.49□□□□□ -0.73
SCARB2-208ENST00000638372 IGKV2-24A0A0C4DH68 120 aa10.49□□□□□ -0.73
SCARB2-208ENST00000638372 PLA2G2AP14555 144 aa10.49□□□□□ -0.73
SCARB2-208ENST00000638372 ATRQ13535 2644 aa10.48□□□□□ -0.73
SCARB2-208ENST00000638372 TEX49A0A1B0GTD5 131 aa10.48□□□□□ -0.73
SCARB2-208ENST00000638372 MIFP14174 115 aa10.48□□□□□ -0.73
SCARB2-208ENST00000638372 C14orf132Q9NPU4 83 aa10.47□□□□□ -0.73
SCARB2-208ENST00000638372 TRIAP1O43715 76 aa10.47□□□□□ -0.73
SCARB2-208ENST00000638372 UBE2D4Q9Y2X8 147 aa10.47□□□□□ -0.73
SCARB2-208ENST00000638372 FAM236AA0A1B0GUQ0 79 aa10.47□□□□□ -0.73
SCARB2-208ENST00000638372 FAM236BA0A1B0GV22 79 aa10.47□□□□□ -0.73
SCARB2-208ENST00000638372 SPANXB1Q9NS25 103 aaPredicted RBP10.47□□□□□ -0.73
SCARB2-208ENST00000638372 OXLD1Q5BKU9 147 aa10.46□□□□□ -0.73
SCARB2-208ENST00000638372 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.46□□□□□ -0.73
SCARB2-208ENST00000638372 IGIPA6NJ69 53 aa10.46□□□□□ -0.74
SCARB2-208ENST00000638372 UFSP1Q6NVU6 142 aa10.46□□□□□ -0.74
SCARB2-208ENST00000638372 TRANK1O15050 2925 aa10.46□□□□□ -0.74
SCARB2-208ENST00000638372 TRIOO75962 3097 aa10.45□□□□□ -0.74
SCARB2-208ENST00000638372 JMJD7-PLA2G4BH0Y9G9 81 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms