RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 LRCOL1A6NCL2 159 aa14.74□□□□□ -0.05
CACNA1A-257ENST00000638009 MYCNOSP40205 109 aa14.74□□□□□ -0.05
CACNA1A-257ENST00000638009 LINC00322Q6ZN03 302 aaPredicted RBP14.73□□□□□ -0.05
CACNA1A-257ENST00000638009 HILS1P60008 231 aa14.73□□□□□ -0.05
CACNA1A-257ENST00000638009 Q6ZR03 302 aa14.73□□□□□ -0.05
CACNA1A-257ENST00000638009 LINC00173Q6ZV60 143 aa14.73□□□□□ -0.05
CACNA1A-257ENST00000638009 IGHV4-30-2A0A087WSY4 118 aa14.73□□□□□ -0.05
CACNA1A-257ENST00000638009 FAM167A-AS1Q96KT0 104 aa14.72□□□□□ -0.05
CACNA1A-257ENST00000638009 Q8N976 141 aa14.72□□□□□ -0.05
CACNA1A-257ENST00000638009 CHCHD10Q8WYQ3 142 aaPredicted RBP14.72□□□□□ -0.05
CACNA1A-257ENST00000638009 J3QKU1 62 aa14.72□□□□□ -0.05
CACNA1A-257ENST00000638009 SCXQ7RTU7 201 aa14.72□□□□□ -0.05
CACNA1A-257ENST00000638009 TRBV6-5A0A0K0K1A5 114 aa14.72□□□□□ -0.05
CACNA1A-257ENST00000638009 IGF1P05019 195 aa14.71□□□□□ -0.05
CACNA1A-257ENST00000638009 PRSS33Q8NF86 280 aa14.71□□□□□ -0.05
CACNA1A-257ENST00000638009 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.71□□□□□ -0.06
CACNA1A-257ENST00000638009 C1orf147Q96MC9 270 aaPredicted RBP14.7□□□□□ -0.06
CACNA1A-257ENST00000638009 LIMD2Q9BT23 127 aa14.7□□□□□ -0.06
CACNA1A-257ENST00000638009 RNF144BQ7Z419 303 aa14.7□□□□□ -0.06
CACNA1A-257ENST00000638009 CFAP126Q5VTH2 177 aa14.7□□□□□ -0.06
CACNA1A-257ENST00000638009 TP73-AS1Q9UF72 201 aa14.7□□□□□ -0.06
CACNA1A-257ENST00000638009 DEFB113Q30KQ7 82 aa14.69□□□□□ -0.06
CACNA1A-257ENST00000638009 A0A0J9YX75 114 aa14.68□□□□□ -0.06
CACNA1A-257ENST00000638009 NEXN-AS1Q8NBZ9 246 aa14.68□□□□□ -0.06
CACNA1A-257ENST00000638009 Q6JHZ5 121 aa14.68□□□□□ -0.06
CACNA1A-257ENST00000638009 SLX1AQ9BQ83 275 aa14.68□□□□□ -0.06
CACNA1A-257ENST00000638009 MSRB1Q9NZV6 116 aa14.67□□□□□ -0.06
CACNA1A-257ENST00000638009 M0R378 163 aa14.67□□□□□ -0.06
CACNA1A-257ENST00000638009 EBI3Q14213 229 aa14.67□□□□□ -0.06
CACNA1A-257ENST00000638009 IGLV3-1P01715 115 aa14.67□□□□□ -0.06
CACNA1A-257ENST00000638009 SPINK6Q6UWN8 80 aa14.66□□□□□ -0.06
CACNA1A-257ENST00000638009 LINC00694P0DN24 101 aa14.66□□□□□ -0.06
CACNA1A-257ENST00000638009 LST1O00453 97 aa14.65□□□□□ -0.06
CACNA1A-257ENST00000638009 CELA1Q9UNI1 258 aa14.65□□□□□ -0.06
CACNA1A-257ENST00000638009 SIRPDQ9H106 197 aa14.65□□□□□ -0.06
CACNA1A-257ENST00000638009 WFDC13Q8IUB5 93 aa14.65□□□□□ -0.06
CACNA1A-257ENST00000638009 VWCEQ96DN2 955 aa14.64□□□□□ -0.07
CACNA1A-257ENST00000638009 A0A096LNI7 61 aa14.63□□□□□ -0.07
CACNA1A-257ENST00000638009 C19orf71A6NCJ1 209 aa14.63□□□□□ -0.07
CACNA1A-257ENST00000638009 IGHV4-38-2P0DP08 117 aa14.63□□□□□ -0.07
CACNA1A-257ENST00000638009 FAM30AQ9NZY2 134 aa14.63□□□□□ -0.07
CACNA1A-257ENST00000638009 CR1P17927 2039 aa14.63□□□□□ -0.07
CACNA1A-257ENST00000638009 CXCL6P80162 114 aa14.63□□□□□ -0.07
CACNA1A-257ENST00000638009 LINC00467Q9BRT7 94 aa14.63□□□□□ -0.07
CACNA1A-257ENST00000638009 IGHV4-30-4P0DP06 118 aa14.63□□□□□ -0.07
CACNA1A-257ENST00000638009 IGHV4-31P0DP07 118 aa14.63□□□□□ -0.07
CACNA1A-257ENST00000638009 C6orf99Q4VX62 202 aa14.63□□□□□ -0.07
CACNA1A-257ENST00000638009 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.62□□□□□ -0.07
CACNA1A-257ENST00000638009 LY6LH3BQJ8 138 aa14.62□□□□□ -0.07
CACNA1A-257ENST00000638009 ESM1Q9NQ30 184 aa14.62□□□□□ -0.07
CACNA1A-257ENST00000638009 SYCNQ0VAF6 134 aa14.61□□□□□ -0.07
CACNA1A-257ENST00000638009 NANOS2P60321 138 aaKnown RBP14.61□□□□□ -0.07
CACNA1A-257ENST00000638009 COL27A1Q8IZC6 1860 aaPredicted RBP14.61□□□□□ -0.07
CACNA1A-257ENST00000638009 PYGO1Q9Y3Y4 419 aa14.61□□□□□ -0.07
CACNA1A-257ENST00000638009 TRBV6-8A0A0A6YYG3 113 aa14.6□□□□□ -0.07
CACNA1A-257ENST00000638009 FAM19A5Q7Z5A7 132 aaPredicted RBP14.6□□□□□ -0.07
CACNA1A-257ENST00000638009 CD164L2Q6UWJ8 174 aa14.6□□□□□ -0.07
CACNA1A-257ENST00000638009 ESRGQ1W209 222 aa14.6□□□□□ -0.07
CACNA1A-257ENST00000638009 CTSZQ9UBR2 303 aa14.6□□□□□ -0.07
CACNA1A-257ENST00000638009 FASNP49327 2511 aaKnown RBP14.6□□□□□ -0.07
CACNA1A-257ENST00000638009 NUPR1O60356 82 aa14.59□□□□□ -0.07
CACNA1A-257ENST00000638009 LOC107984640A0A0U1RRK4 108 aa14.59□□□□□ -0.07
CACNA1A-257ENST00000638009 SPAG11AQ6PDA7 123 aa14.59□□□□□ -0.07
CACNA1A-257ENST00000638009 CCDC179H3BU77 68 aa14.58□□□□□ -0.08
CACNA1A-257ENST00000638009 M0QXV9 152 aa14.58□□□□□ -0.08
CACNA1A-257ENST00000638009 HRCT1Q6UXD1 115 aa14.58□□□□□ -0.08
CACNA1A-257ENST00000638009 CDKN2A-AS1Q9UH64 79 aa14.58□□□□□ -0.08
CACNA1A-257ENST00000638009 hDV103S1A0JD37 113 aa14.57□□□□□ -0.08
CACNA1A-257ENST00000638009 SLPIP03973 132 aa14.57□□□□□ -0.08
CACNA1A-257ENST00000638009 IGLV4-69A0A075B6H9 119 aa14.57□□□□□ -0.08
CACNA1A-257ENST00000638009 MAP6D1Q9H9H5 199 aa14.57□□□□□ -0.08
CACNA1A-257ENST00000638009 IGLV4-3A0A075B6K6 122 aa14.56□□□□□ -0.08
CACNA1A-257ENST00000638009 DEFB131BA0A096LNP1 70 aa14.56□□□□□ -0.08
CACNA1A-257ENST00000638009 IGHV4-61A0A0C4DH41 118 aa14.56□□□□□ -0.08
CACNA1A-257ENST00000638009 BPTFQ12830 3046 aa14.56□□□□□ -0.08
CACNA1A-257ENST00000638009 MRPS12O15235 138 aaKnown RBP14.56□□□□□ -0.08
CACNA1A-257ENST00000638009 LINC00526Q96FQ7 95 aa14.55□□□□□ -0.08
CACNA1A-257ENST00000638009 TTTY13Q9BZ97 58 aa14.55□□□□□ -0.08
CACNA1A-257ENST00000638009 RPL28P46779 137 aaKnown RBP14.55□□□□□ -0.08
CACNA1A-257ENST00000638009 ANKRD11Q6UB99 2663 aaPredicted RBP14.55□□□□□ -0.08
CACNA1A-257ENST00000638009 TRBV6-4A0A1B0GX49 114 aa14.55□□□□□ -0.08
CACNA1A-257ENST00000638009 PRO0628Q9UI54 55 aa14.55□□□□□ -0.08
CACNA1A-257ENST00000638009 Q6ZQY7 126 aa14.54□□□□□ -0.08
CACNA1A-257ENST00000638009 IGKV2-28A0A075B6P5 120 aa14.54□□□□□ -0.08
CACNA1A-257ENST00000638009 IGKV2D-28P01615 120 aa14.54□□□□□ -0.08
CACNA1A-257ENST00000638009 CHD8Q9HCK8 2581 aa14.54□□□□□ -0.08
CACNA1A-257ENST00000638009 ZNF73O43830 326 aaPredicted RBP14.53□□□□□ -0.08
CACNA1A-257ENST00000638009 LINC00208Q96KT6 92 aa14.53□□□□□ -0.08
CACNA1A-257ENST00000638009 C22orf34Q6ZV56 151 aa14.52□□□□□ -0.08
CACNA1A-257ENST00000638009 EIF4EBP1Q13541 118 aaPredicted RBP14.52□□□□□ -0.08
CACNA1A-257ENST00000638009 USP9YO00507 2555 aaPredicted RBP14.52□□□□□ -0.08
CACNA1A-257ENST00000638009 PSPHP1O15172 72 aa14.52□□□□□ -0.09
CACNA1A-257ENST00000638009 THSD7BQ9C0I4 1608 aa14.52□□□□□ -0.09
CACNA1A-257ENST00000638009 TMEM254Q8TBM7 123 aa14.52□□□□□ -0.09
CACNA1A-257ENST00000638009 X6R8D5 127 aa14.51□□□□□ -0.09
CACNA1A-257ENST00000638009 ZNF22P17026 224 aaPredicted RBP14.5□□□□□ -0.09
CACNA1A-257ENST00000638009 U3KQK5 164 aa14.5□□□□□ -0.09
CACNA1A-257ENST00000638009 TRBV7-7A0A0K0K1E9 115 aa14.5□□□□□ -0.09
CACNA1A-257ENST00000638009 A6NDX4 124 aa14.49□□□□□ -0.09
CACNA1A-257ENST00000638009 NTM-AS1Q6ZSK4 140 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms