RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 IGLC1P0CG04 106 aa0.38□□□□□ -2.35
TARDBP-220ENST00000618606 HAMPP81172 84 aa0.38□□□□□ -2.35
TARDBP-220ENST00000618606 TMEM170BQ5T4T1 132 aa0.38□□□□□ -2.35
TARDBP-220ENST00000618606 FAM167A-AS1Q96KT0 104 aa0.38□□□□□ -2.35
TARDBP-220ENST00000618606 PLAC8Q9NZF1 115 aa0.38□□□□□ -2.35
TARDBP-220ENST00000618606 UQCR10Q9UDW1 63 aa0.38□□□□□ -2.35
TARDBP-220ENST00000618606 ARL2-SNX15V9GYD0 113 aa0.38□□□□□ -2.35
TARDBP-220ENST00000618606 SYNE1Q8NF91 8797 aaKnown RBP0.38□□□□□ -2.35
TARDBP-220ENST00000618606 CNTLNQ9NXG0 1405 aa0.38□□□□□ -2.35
TARDBP-220ENST00000618606 KDM5AP29375 1690 aaKnown RBP0.37□□□□□ -2.35
TARDBP-220ENST00000618606 LAMC3Q9Y6N6 1575 aa0.37□□□□□ -2.35
TARDBP-220ENST00000618606 DOCK2Q92608 1830 aa0.37□□□□□ -2.35
TARDBP-220ENST00000618606 LOC285095A0A1B0GVY8 99 aa0.37□□□□□ -2.35
TARDBP-220ENST00000618606 NAP1L6A6NFF2 107 aa0.37□□□□□ -2.35
TARDBP-220ENST00000618606 H3BQ15 152 aa0.37□□□□□ -2.35
TARDBP-220ENST00000618606 M0R3E3 92 aa0.37□□□□□ -2.35
TARDBP-220ENST00000618606 UBE2D3P61077 147 aa0.37□□□□□ -2.35
TARDBP-220ENST00000618606 UBE2D2P62837 147 aa0.37□□□□□ -2.35
TARDBP-220ENST00000618606 SEC11AP67812 179 aa0.37□□□□□ -2.35
TARDBP-220ENST00000618606 FAM223AQ8IWN6 122 aa0.37□□□□□ -2.35
TARDBP-220ENST00000618606 ACBD7Q8N6N7 88 aa0.37□□□□□ -2.35
TARDBP-220ENST00000618606 SMIM4Q8WVI0 70 aa0.37□□□□□ -2.35
TARDBP-220ENST00000618606 NXT2Q9NPJ8 142 aaKnown RBP0.37□□□□□ -2.35
TARDBP-220ENST00000618606 APCP25054 2843 aa0.37□□□□□ -2.35
TARDBP-220ENST00000618606 ARHGEF5Q12774 1597 aa0.36□□□□□ -2.35
TARDBP-220ENST00000618606 PSME4Q14997 1843 aa0.36□□□□□ -2.35
TARDBP-220ENST00000618606 M0R143 59 aa0.36□□□□□ -2.35
TARDBP-220ENST00000618606 BCE1O60756 84 aa0.36□□□□□ -2.35
TARDBP-220ENST00000618606 COX6A2Q02221 97 aa0.36□□□□□ -2.35
TARDBP-220ENST00000618606 Q6JHZ5 121 aa0.36□□□□□ -2.35
TARDBP-220ENST00000618606 PRO1854Q9UHT4 67 aa0.36□□□□□ -2.35
TARDBP-220ENST00000618606 HMGXB3Q12766 1538 aa0.36□□□□□ -2.35
TARDBP-220ENST00000618606 MDN1Q9NU22 5596 aa0.36□□□□□ -2.35
TARDBP-220ENST00000618606 SHANK2Q9UPX8 1470 aa0.35□□□□□ -2.35
TARDBP-220ENST00000618606 TET3O43151 1660 aa0.35□□□□□ -2.35
TARDBP-220ENST00000618606 KIF21AQ7Z4S6 1674 aa0.35□□□□□ -2.35
TARDBP-220ENST00000618606 PIN1P1O15428 100 aa0.35□□□□□ -2.35
TARDBP-220ENST00000618606 APOC3P02656 99 aa0.35□□□□□ -2.35
TARDBP-220ENST00000618606 TRAPPC2P0DI81 140 aa0.35□□□□□ -2.35
TARDBP-220ENST00000618606 TRAPPC2BP0DI82 140 aa0.35□□□□□ -2.35
TARDBP-220ENST00000618606 COX17Q14061 63 aa0.35□□□□□ -2.35
TARDBP-220ENST00000618606 SMR3AQ99954 134 aa0.35□□□□□ -2.35
TARDBP-220ENST00000618606 ZNF609O15014 1411 aa0.35□□□□□ -2.35
TARDBP-220ENST00000618606 FRAS1Q86XX4 4008 aa0.35□□□□□ -2.35
TARDBP-220ENST00000618606 DOCK11Q5JSL3 2073 aa0.34□□□□□ -2.35
TARDBP-220ENST00000618606 MYOM1P52179 1685 aa0.34□□□□□ -2.35
TARDBP-220ENST00000618606 A0A0G2JND7 137 aa0.34□□□□□ -2.36
TARDBP-220ENST00000618606 FAM223BA6NKX1 122 aa0.34□□□□□ -2.36
TARDBP-220ENST00000618606 ASIPP42127 132 aa0.34□□□□□ -2.36
TARDBP-220ENST00000618606 KRTDAPP60985 99 aa0.34□□□□□ -2.36
TARDBP-220ENST00000618606 PMCHL2Q9BQD1 86 aa0.34□□□□□ -2.36
TARDBP-220ENST00000618606 SNHG12Q9BXW3 62 aa0.34□□□□□ -2.36
TARDBP-220ENST00000618606 AP4S1Q9Y587 144 aa0.34□□□□□ -2.36
TARDBP-220ENST00000618606 LRP6O75581 1613 aa0.34□□□□□ -2.36
TARDBP-220ENST00000618606 LAMC1P11047 1609 aa0.34□□□□□ -2.36
TARDBP-220ENST00000618606 ABCC10Q5T3U5 1492 aa0.34□□□□□ -2.36
TARDBP-220ENST00000618606 MUC5ACP98088 5654 aa0.33□□□□□ -2.36
TARDBP-220ENST00000618606 ANKRD36BQ8N2N9 1353 aa0.33□□□□□ -2.36
TARDBP-220ENST00000618606 UNC13BO14795 1591 aa0.33□□□□□ -2.36
TARDBP-220ENST00000618606 NSD3Q9BZ95 1437 aa0.33□□□□□ -2.36
TARDBP-220ENST00000618606 S100A8P05109 93 aa0.33□□□□□ -2.36
TARDBP-220ENST00000618606 COX6CP09669 75 aa0.33□□□□□ -2.36
TARDBP-220ENST00000618606 UBA52P62987 128 aaKnown RBP0.33□□□□□ -2.36
TARDBP-220ENST00000618606 LCN9Q8WX39 176 aa0.33□□□□□ -2.36
TARDBP-220ENST00000618606 SPRR4Q96PI1 79 aa0.33□□□□□ -2.36
TARDBP-220ENST00000618606 FAIMQ9NVQ4 179 aa0.33□□□□□ -2.36
TARDBP-220ENST00000618606 CACFD1Q9UGQ2 172 aa0.33□□□□□ -2.36
TARDBP-220ENST00000618606 EHBP1L1Q8N3D4 1523 aa0.33□□□□□ -2.36
TARDBP-220ENST00000618606 COL6A3P12111 3177 aa0.33□□□□□ -2.36
TARDBP-220ENST00000618606 CCNB3Q8WWL7 1395 aa0.32□□□□□ -2.36
TARDBP-220ENST00000618606 TOP2BQ02880 1626 aa0.32□□□□□ -2.36
TARDBP-220ENST00000618606 A0A1B0GWA3 101 aa0.32□□□□□ -2.36
TARDBP-220ENST00000618606 MGPP08493 103 aa0.32□□□□□ -2.36
TARDBP-220ENST00000618606 PKIAP61925 76 aa0.32□□□□□ -2.36
TARDBP-220ENST00000618606 SPINK6Q6UWN8 80 aa0.32□□□□□ -2.36
TARDBP-220ENST00000618606 FDCSPQ8NFU4 85 aa0.32□□□□□ -2.36
TARDBP-220ENST00000618606 DPY30Q9C005 99 aa0.32□□□□□ -2.36
TARDBP-220ENST00000618606 PRO0255Q9UI72 69 aa0.32□□□□□ -2.36
TARDBP-220ENST00000618606 MRC2Q9UBG0 1479 aa0.32□□□□□ -2.36
TARDBP-220ENST00000618606 PI4KAP42356 2102 aa0.32□□□□□ -2.36
TARDBP-220ENST00000618606 BDP1A6H8Y1 2624 aa0.32□□□□□ -2.36
TARDBP-220ENST00000618606 ERCC6L2Q5T890 1561 aa0.32□□□□□ -2.36
TARDBP-220ENST00000618606 VPS8Q8N3P4 1428 aa0.31□□□□□ -2.36
TARDBP-220ENST00000618606 SCN7AQ01118 1682 aa0.31□□□□□ -2.36
TARDBP-220ENST00000618606 COL4A6Q14031 1691 aa0.31□□□□□ -2.36
TARDBP-220ENST00000618606 TOPAZ1Q8N9V7 1692 aa0.31□□□□□ -2.36
TARDBP-220ENST00000618606 ADGRL2O95490 1459 aa0.31□□□□□ -2.36
TARDBP-220ENST00000618606 LRRC37A2A6NM11 1700 aa0.31□□□□□ -2.36
TARDBP-220ENST00000618606 ABCA3Q99758 1704 aa0.31□□□□□ -2.36
TARDBP-220ENST00000618606 KRTAP21-1Q3LI58 79 aa0.31□□□□□ -2.36
TARDBP-220ENST00000618606 COL5A1-AS1Q5SY13 56 aa0.31□□□□□ -2.36
TARDBP-220ENST00000618606 C10orf113Q5VZT2 155 aa0.31□□□□□ -2.36
TARDBP-220ENST00000618606 VAMP8Q9BV40 100 aa0.31□□□□□ -2.36
TARDBP-220ENST00000618606 KCPQ6ZWJ8 1503 aa0.31□□□□□ -2.36
TARDBP-220ENST00000618606 MYO7AQ13402 2215 aa0.3□□□□□ -2.36
TARDBP-220ENST00000618606 CHD1O14646 1710 aa0.3□□□□□ -2.36
TARDBP-220ENST00000618606 PRDM15P57071 1507 aaPredicted RBP0.3□□□□□ -2.36
TARDBP-220ENST00000618606 MACF1Q9UPN3 7388 aaKnown RBP0.3□□□□□ -2.36
TARDBP-220ENST00000618606 BTAF1O14981 1849 aa0.3□□□□□ -2.36
TARDBP-220ENST00000618606 A0A0D9SFI3 127 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms