RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 C11orf21Q9P2W6 132 aa7.52□□□□□ -1.21
SMARCA1-205ENST00000617310 TRBV6-1A0A0K0K1D8 114 aa7.51□□□□□ -1.21
SMARCA1-205ENST00000617310 CDK2AP2O75956 126 aa7.51□□□□□ -1.21
SMARCA1-205ENST00000617310 LOC100131303A0A0U1RQF7 123 aa7.51□□□□□ -1.21
SMARCA1-205ENST00000617310 TIMM17AQ99595 171 aa7.51□□□□□ -1.21
SMARCA1-205ENST00000617310 TRAV8-4A0A0B4J246 113 aa7.51□□□□□ -1.21
SMARCA1-205ENST00000617310 TRBV10-1A0A0K0K1A3 114 aa7.51□□□□□ -1.21
SMARCA1-205ENST00000617310 BAALCQ8WXS3 180 aa7.51□□□□□ -1.21
SMARCA1-205ENST00000617310 PRO1854Q9UHT4 67 aa7.51□□□□□ -1.21
SMARCA1-205ENST00000617310 GAGE12HA6NDE8 117 aa7.5□□□□□ -1.21
SMARCA1-205ENST00000617310 BRI3O95415 125 aa7.5□□□□□ -1.21
SMARCA1-205ENST00000617310 ETDBQ3ZM63 59 aa7.5□□□□□ -1.21
SMARCA1-205ENST00000617310 IGLC6P0CF74 106 aa7.5□□□□□ -1.21
SMARCA1-205ENST00000617310 DCANP1Q8TF63 244 aa7.5□□□□□ -1.21
SMARCA1-205ENST00000617310 TIRAPP58753 221 aa7.5□□□□□ -1.21
SMARCA1-205ENST00000617310 LINC00526Q96FQ7 95 aa7.5□□□□□ -1.21
SMARCA1-205ENST00000617310 SND1-IT1Q9HBX3 110 aa7.5□□□□□ -1.21
SMARCA1-205ENST00000617310 BSNQ9UPA5 3926 aa7.5□□□□□ -1.21
SMARCA1-205ENST00000617310 NDUFS6O75380 124 aaKnown RBP7.49□□□□□ -1.21
SMARCA1-205ENST00000617310 LINC00467Q9BRT7 94 aa7.49□□□□□ -1.21
SMARCA1-205ENST00000617310 NOTCH1P46531 2555 aa7.49□□□□□ -1.21
SMARCA1-205ENST00000617310 TINCRA0A1B0GVN0 87 aa7.49□□□□□ -1.21
SMARCA1-205ENST00000617310 NDUFA1O15239 70 aa7.49□□□□□ -1.21
SMARCA1-205ENST00000617310 MED14OSP0DP75 135 aa7.49□□□□□ -1.21
SMARCA1-205ENST00000617310 BVES-AS1Q5T3Y7 98 aa7.49□□□□□ -1.21
SMARCA1-205ENST00000617310 COX7B2Q8TF08 81 aa7.49□□□□□ -1.21
SMARCA1-205ENST00000617310 NANOS2P60321 138 aaKnown RBP7.49□□□□□ -1.21
SMARCA1-205ENST00000617310 ETDCA0A1B0GVM5 59 aa7.49□□□□□ -1.21
SMARCA1-205ENST00000617310 MIFP14174 115 aa7.49□□□□□ -1.21
SMARCA1-205ENST00000617310 LYRM9A8MSI8 78 aa7.48□□□□□ -1.21
SMARCA1-205ENST00000617310 NBEAL1Q6ZS30 2694 aa7.48□□□□□ -1.21
SMARCA1-205ENST00000617310 CRYGDP07320 174 aa7.48□□□□□ -1.21
SMARCA1-205ENST00000617310 TM2D2Q9BX73 214 aa7.48□□□□□ -1.21
SMARCA1-205ENST00000617310 GCN1Q92616 2671 aaKnown RBP7.48□□□□□ -1.21
SMARCA1-205ENST00000617310 TRAV12-1A0A0B4J245 112 aa7.48□□□□□ -1.21
SMARCA1-205ENST00000617310 REG3AQ06141 175 aa7.48□□□□□ -1.21
SMARCA1-205ENST00000617310 CFAP126Q5VTH2 177 aa7.48□□□□□ -1.21
SMARCA1-205ENST00000617310 A4D1N5 150 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 SMIM9A6NGZ8 99 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 H3BMG7 143 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 RS1O15537 224 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 COL27A1Q8IZC6 1860 aaPredicted RBP7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 A0A0J9YWU9 116 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 A0A1B0GXF2 115 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 IGLV2-11P01706 119 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 KPRPQ5T749 579 aaPredicted RBP7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 MIR7-3HGQ8N6C7 128 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 NEXN-AS1Q8NBZ9 246 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 GTSF1LQ9H1H1 148 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 NCR3O14931 201 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 RNASE3P12724 160 aaKnown RBP7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 HAMPP81172 84 aa7.47□□□□□ -1.21
SMARCA1-205ENST00000617310 COA6Q5JTJ3 125 aaKnown RBP7.46□□□□□ -1.21
SMARCA1-205ENST00000617310 MUSTN1Q8IVN3 82 aa7.46□□□□□ -1.21
SMARCA1-205ENST00000617310 CEND1Q8N111 149 aa7.46□□□□□ -1.21
SMARCA1-205ENST00000617310 ODF3Q96PU9 254 aa7.46□□□□□ -1.21
SMARCA1-205ENST00000617310 CDKN2A-AS1Q9UH64 79 aa7.46□□□□□ -1.21
SMARCA1-205ENST00000617310 TRAV13-2A0A0B4J235 113 aa7.46□□□□□ -1.22
SMARCA1-205ENST00000617310 LRCOL1A6NCL2 159 aa7.46□□□□□ -1.22
SMARCA1-205ENST00000617310 DLEU1O43261 78 aa7.46□□□□□ -1.22
SMARCA1-205ENST00000617310 LY6G6CO95867 125 aa7.46□□□□□ -1.22
SMARCA1-205ENST00000617310 GAS8-AS1O95177 125 aa7.46□□□□□ -1.22
SMARCA1-205ENST00000617310 LINC01545Q5VT33 79 aa7.46□□□□□ -1.22
SMARCA1-205ENST00000617310 COX11Q9Y6N1 276 aa7.46□□□□□ -1.22
SMARCA1-205ENST00000617310 NDUFA7O95182 113 aa7.45□□□□□ -1.22
SMARCA1-205ENST00000617310 TOMM6Q96B49 74 aa7.45□□□□□ -1.22
SMARCA1-205ENST00000617310 ODF1Q14990 250 aa7.45□□□□□ -1.22
SMARCA1-205ENST00000617310 C12orf74Q32Q52 190 aa7.45□□□□□ -1.22
SMARCA1-205ENST00000617310 IL17DQ8TAD2 202 aa7.45□□□□□ -1.22
SMARCA1-205ENST00000617310 XAGE1AQ9HD64 81 aa7.45□□□□□ -1.22
SMARCA1-205ENST00000617310 CPAMD8Q8IZJ3 1885 aa7.45□□□□□ -1.22
SMARCA1-205ENST00000617310 M0QY20 66 aa7.44□□□□□ -1.22
SMARCA1-205ENST00000617310 CHCHD10Q8WYQ3 142 aaPredicted RBP7.44□□□□□ -1.22
SMARCA1-205ENST00000617310 IGLV1-51P01701 117 aa7.44□□□□□ -1.22
SMARCA1-205ENST00000617310 CLUHP3Q96NS8 147 aa7.44□□□□□ -1.22
SMARCA1-205ENST00000617310 CFC1BP0CG36 223 aa7.44□□□□□ -1.22
SMARCA1-205ENST00000617310 CFC1P0CG37 223 aa7.44□□□□□ -1.22
SMARCA1-205ENST00000617310 CARD19Q96LW7 228 aa7.44□□□□□ -1.22
SMARCA1-205ENST00000617310 A0A096LNI7 61 aa7.44□□□□□ -1.22
SMARCA1-205ENST00000617310 HERV-K104P63124 156 aa7.44□□□□□ -1.22
SMARCA1-205ENST00000617310 TP73-AS1Q9UF72 201 aa7.44□□□□□ -1.22
SMARCA1-205ENST00000617310 PTPRBP23467 1997 aa7.43□□□□□ -1.22
SMARCA1-205ENST00000617310 KLLNB2CW77 178 aa7.43□□□□□ -1.22
SMARCA1-205ENST00000617310 RBX1P62877 108 aa7.43□□□□□ -1.22
SMARCA1-205ENST00000617310 UBE2V1Q13404 147 aa7.43□□□□□ -1.22
SMARCA1-205ENST00000617310 TRBV6-8A0A0A6YYG3 113 aa7.43□□□□□ -1.22
SMARCA1-205ENST00000617310 TRAV10A0A0B4J240 114 aa7.43□□□□□ -1.22
SMARCA1-205ENST00000617310 OVOL2Q9BRP0 275 aa7.43□□□□□ -1.22
SMARCA1-205ENST00000617310 CSMD2Q7Z408 3487 aa7.43□□□□□ -1.22
SMARCA1-205ENST00000617310 SOCS3O14543 225 aa7.43□□□□□ -1.22
SMARCA1-205ENST00000617310 PCP4P48539 62 aa7.43□□□□□ -1.22
SMARCA1-205ENST00000617310 FXYD2P54710 66 aa7.42□□□□□ -1.22
SMARCA1-205ENST00000617310 UBR5O95071 2799 aaPredicted RBP7.42□□□□□ -1.22
SMARCA1-205ENST00000617310 UBE2AP49459 152 aa7.42□□□□□ -1.22
SMARCA1-205ENST00000617310 UNC79Q9P2D8 2635 aa7.42□□□□□ -1.22
SMARCA1-205ENST00000617310 A8MZ25 164 aa7.42□□□□□ -1.22
SMARCA1-205ENST00000617310 HIGD2AQ9BW72 106 aa7.42□□□□□ -1.22
SMARCA1-205ENST00000617310 C9orf118A6NHY6 69 aa7.41□□□□□ -1.22
SMARCA1-205ENST00000617310 RPL32P62910 135 aaKnown RBP7.41□□□□□ -1.22
SMARCA1-205ENST00000617310 IGSF10Q6WRI0 2623 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms