RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 GTSF1LQ9H1H1 148 aa11.18□□□□□ -0.62
NR1H3-235ENST00000616973 UBE2D1P51668 147 aa11.17□□□□□ -0.62
NR1H3-235ENST00000616973 SMAGPQ0VAQ4 97 aa11.17□□□□□ -0.62
NR1H3-235ENST00000616973 RNASE13Q5GAN3 156 aaKnown RBP11.17□□□□□ -0.62
NR1H3-235ENST00000616973 NTM-AS1Q6ZSK4 140 aa11.17□□□□□ -0.62
NR1H3-235ENST00000616973 KIR2DL5BQ8NHK3 375 aa11.17□□□□□ -0.62
NR1H3-235ENST00000616973 GAGE12JA6NER3 117 aa11.17□□□□□ -0.62
NR1H3-235ENST00000616973 FABP2P12104 132 aa11.17□□□□□ -0.62
NR1H3-235ENST00000616973 TIRAPP58753 221 aa11.17□□□□□ -0.62
NR1H3-235ENST00000616973 GAGE4Q13068 117 aa11.17□□□□□ -0.62
NR1H3-235ENST00000616973 GAGE5Q13069 117 aa11.17□□□□□ -0.62
NR1H3-235ENST00000616973 GAGE13Q4V321 117 aa11.17□□□□□ -0.62
NR1H3-235ENST00000616973 LINC00612Q8N6U2 182 aa11.17□□□□□ -0.62
NR1H3-235ENST00000616973 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.17□□□□□ -0.62
NR1H3-235ENST00000616973 SMIM9A6NGZ8 99 aa11.16□□□□□ -0.62
NR1H3-235ENST00000616973 IGLL5B9A064 214 aa11.16□□□□□ -0.62
NR1H3-235ENST00000616973 DGAT2L7PQ6IED9 249 aa11.16□□□□□ -0.62
NR1H3-235ENST00000616973 SPATA3Q8NHX4 192 aa11.16□□□□□ -0.62
NR1H3-235ENST00000616973 TRGV4A0A0C4DH28 118 aa11.15□□□□□ -0.62
NR1H3-235ENST00000616973 IGHV1-58A0A0C4DH39 117 aa11.15□□□□□ -0.62
NR1H3-235ENST00000616973 IGHV3-30-3P0DP02 117 aa11.15□□□□□ -0.62
NR1H3-235ENST00000616973 FAM19A3Q7Z5A8 133 aa11.15□□□□□ -0.62
NR1H3-235ENST00000616973 IGLV5-45A0A087WSX0 123 aa11.15□□□□□ -0.62
NR1H3-235ENST00000616973 FN1P02751 2386 aaKnown RBP11.15□□□□□ -0.62
NR1H3-235ENST00000616973 FHL2Q14192 279 aa11.15□□□□□ -0.62
NR1H3-235ENST00000616973 SPCS1Q9Y6A9 102 aa11.15□□□□□ -0.62
NR1H3-235ENST00000616973 IGHV3-30P01768 117 aa11.14□□□□□ -0.63
NR1H3-235ENST00000616973 LINC00694P0DN24 101 aa11.14□□□□□ -0.63
NR1H3-235ENST00000616973 IGHV3-30-5P0DP03 117 aa11.14□□□□□ -0.63
NR1H3-235ENST00000616973 IGHV3-64A0A075B6Q5 118 aa11.13□□□□□ -0.63
NR1H3-235ENST00000616973 H7C423 109 aa11.13□□□□□ -0.63
NR1H3-235ENST00000616973 GEMIN7Q9H840 131 aaKnown RBP11.13□□□□□ -0.63
NR1H3-235ENST00000616973 X6R8D5 127 aa11.13□□□□□ -0.63
NR1H3-235ENST00000616973 C2CD3Q4AC94 2353 aa11.13□□□□□ -0.63
NR1H3-235ENST00000616973 VSIG2Q96IQ7 327 aa11.13□□□□□ -0.63
NR1H3-235ENST00000616973 TMEM243Q9BU79 118 aa11.12□□□□□ -0.63
NR1H3-235ENST00000616973 JMJD1CQ15652 2540 aa11.12□□□□□ -0.63
NR1H3-235ENST00000616973 NSD1Q96L73 2696 aaPredicted RBP11.12□□□□□ -0.63
NR1H3-235ENST00000616973 C10orf126Q8N4M7 172 aa11.11□□□□□ -0.63
NR1H3-235ENST00000616973 HIVEP1P15822 2718 aa11.11□□□□□ -0.63
NR1H3-235ENST00000616973 BAHCC1Q9P281 2608 aa11.11□□□□□ -0.63
NR1H3-235ENST00000616973 TRAV8-3A0A0A6YYJ7 113 aa11.11□□□□□ -0.63
NR1H3-235ENST00000616973 LOC100131303A0A0U1RQF7 123 aa11.11□□□□□ -0.63
NR1H3-235ENST00000616973 HERVK_113P63121 156 aa11.11□□□□□ -0.63
NR1H3-235ENST00000616973 WFDC9Q8NEX5 89 aa11.11□□□□□ -0.63
NR1H3-235ENST00000616973 CDC42SE2Q9NRR3 84 aa11.11□□□□□ -0.63
NR1H3-235ENST00000616973 A0A0J9YXY3 114 aa11.1□□□□□ -0.63
NR1H3-235ENST00000616973 TMEM238C9JI98 176 aa11.1□□□□□ -0.63
NR1H3-235ENST00000616973 WIPF1O43516 503 aa11.1□□□□□ -0.63
NR1H3-235ENST00000616973 NOTCH3Q9UM47 2321 aa11.1□□□□□ -0.63
NR1H3-235ENST00000616973 LINC00242Q5T6M2 205 aa11.09□□□□□ -0.63
NR1H3-235ENST00000616973 CDKN2A-AS1Q9UH64 79 aa11.09□□□□□ -0.63
NR1H3-235ENST00000616973 UBE2L6O14933 153 aa11.09□□□□□ -0.63
NR1H3-235ENST00000616973 SPINK8P0C7L1 97 aa11.09□□□□□ -0.63
NR1H3-235ENST00000616973 APOC4P55056 127 aa11.09□□□□□ -0.63
NR1H3-235ENST00000616973 ZFAND6Q6FIF0 208 aa11.08□□□□□ -0.64
NR1H3-235ENST00000616973 TMEM101Q96IK0 257 aa11.08□□□□□ -0.64
NR1H3-235ENST00000616973 NDUFA12Q9UI09 145 aa11.08□□□□□ -0.64
NR1H3-235ENST00000616973 LYRM9A8MSI8 78 aa11.07□□□□□ -0.64
NR1H3-235ENST00000616973 DEFB130BP0DP73 79 aa11.07□□□□□ -0.64
NR1H3-235ENST00000616973 DEFB130AP0DP74 79 aa11.07□□□□□ -0.64
NR1H3-235ENST00000616973 COX6A2Q02221 97 aa11.07□□□□□ -0.64
NR1H3-235ENST00000616973 LITAFQ99732 161 aa11.07□□□□□ -0.64
NR1H3-235ENST00000616973 PGPEP1Q9NXJ5 209 aa11.07□□□□□ -0.64
NR1H3-235ENST00000616973 TRBV6-8A0A0A6YYG3 113 aa11.06□□□□□ -0.64
NR1H3-235ENST00000616973 IGLV5-39A0A0G2JS06 123 aa11.06□□□□□ -0.64
NR1H3-235ENST00000616973 RPL24P83731 157 aaKnown RBP11.06□□□□□ -0.64
NR1H3-235ENST00000616973 OCIAD2Q56VL3 154 aa11.06□□□□□ -0.64
NR1H3-235ENST00000616973 CFC1BP0CG36 223 aa11.05□□□□□ -0.64
NR1H3-235ENST00000616973 CFC1P0CG37 223 aa11.05□□□□□ -0.64
NR1H3-235ENST00000616973 RNF151Q2KHN1 245 aa11.05□□□□□ -0.64
NR1H3-235ENST00000616973 VPS25Q9BRG1 176 aa11.05□□□□□ -0.64
NR1H3-235ENST00000616973 K7ERU9 68 aa11.05□□□□□ -0.64
NR1H3-235ENST00000616973 APOMO95445 188 aa11.05□□□□□ -0.64
NR1H3-235ENST00000616973 SPANXDQ9BXN6 97 aa11.05□□□□□ -0.64
NR1H3-235ENST00000616973 SPANXCQ9NY87 97 aa11.05□□□□□ -0.64
NR1H3-235ENST00000616973 NIPBLQ6KC79 2804 aaeCLIP11.05□□□□□ -0.64
NR1H3-235ENST00000616973 NDUFA1O15239 70 aa11.04□□□□□ -0.64
NR1H3-235ENST00000616973 TIMM17BO60830 172 aa11.04□□□□□ -0.64
NR1H3-235ENST00000616973 A4D1N5 150 aa11.03□□□□□ -0.64
NR1H3-235ENST00000616973 A8MZ25 164 aa11.03□□□□□ -0.64
NR1H3-235ENST00000616973 TSPAN13O95857 204 aa11.03□□□□□ -0.64
NR1H3-235ENST00000616973 MUSTN1Q8IVN3 82 aa11.03□□□□□ -0.64
NR1H3-235ENST00000616973 TRAV13-1A0A0B4J241 112 aa11.03□□□□□ -0.64
NR1H3-235ENST00000616973 PRO0255Q9UI72 69 aa11.03□□□□□ -0.64
NR1H3-235ENST00000616973 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.02□□□□□ -0.65
NR1H3-235ENST00000616973 A0A0B4J2C4 111 aa11.02□□□□□ -0.65
NR1H3-235ENST00000616973 SMIM1B2RUZ4 78 aa11.02□□□□□ -0.65
NR1H3-235ENST00000616973 DEFB135Q30KP9 77 aa11.02□□□□□ -0.65
NR1H3-235ENST00000616973 FAM222AQ5U5X8 452 aa11.02□□□□□ -0.65
NR1H3-235ENST00000616973 PRO1854Q9UHT4 67 aa11.02□□□□□ -0.65
NR1H3-235ENST00000616973 GAGE6Q13070 117 aa11.01□□□□□ -0.65
NR1H3-235ENST00000616973 ATP6V0E2Q8NHE4 81 aa11.01□□□□□ -0.65
NR1H3-235ENST00000616973 F5H768 121 aa11.01□□□□□ -0.65
NR1H3-235ENST00000616973 GYPEP15421 78 aa11.01□□□□□ -0.65
NR1H3-235ENST00000616973 MIFP14174 115 aa11□□□□□ -0.65
NR1H3-235ENST00000616973 MIAQ16674 131 aa11□□□□□ -0.65
NR1H3-235ENST00000616973 LYRM7Q5U5X0 104 aa11□□□□□ -0.65
NR1H3-235ENST00000616973 IGHV4-28A0A0C4DH34 117 aa10.99□□□□□ -0.65
NR1H3-235ENST00000616973 F8W1H4 67 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms