RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 CLEC2BQ92478 149 aa6.37□□□□□ -1.39
LIG4-204ENST00000611712 DMXL2Q8TDJ6 3036 aa6.37□□□□□ -1.39
LIG4-204ENST00000611712 MIAQ16674 131 aa6.37□□□□□ -1.39
LIG4-204ENST00000611712 CRYBA4P53673 196 aa6.36□□□□□ -1.39
LIG4-204ENST00000611712 C5orf38Q86SI9 138 aa6.36□□□□□ -1.39
LIG4-204ENST00000611712 WFDC11Q8NEX6 87 aa6.36□□□□□ -1.39
LIG4-204ENST00000611712 C16orf74Q96GX8 76 aa6.36□□□□□ -1.39
LIG4-204ENST00000611712 KRTAP10-9P60411 292 aa6.36□□□□□ -1.39
LIG4-204ENST00000611712 TMEM263Q8WUH6 116 aaKnown RBP6.36□□□□□ -1.39
LIG4-204ENST00000611712 TRBV10-1A0A0K0K1A3 114 aa6.36□□□□□ -1.39
LIG4-204ENST00000611712 ZNF580Q9UK33 172 aa6.36□□□□□ -1.39
LIG4-204ENST00000611712 CLPSL2Q6UWE3 100 aa6.36□□□□□ -1.39
LIG4-204ENST00000611712 JMJD1CQ15652 2540 aa6.35□□□□□ -1.39
LIG4-204ENST00000611712 TRBV10-2A0A0K0K1G8 114 aa6.35□□□□□ -1.39
LIG4-204ENST00000611712 C15orf53Q8NAA6 179 aa6.35□□□□□ -1.39
LIG4-204ENST00000611712 HERV-K104P63124 156 aa6.35□□□□□ -1.39
LIG4-204ENST00000611712 DMXL1Q9Y485 3027 aa6.35□□□□□ -1.39
LIG4-204ENST00000611712 TRAV13-2A0A0B4J235 113 aa6.34□□□□□ -1.39
LIG4-204ENST00000611712 XCL1P47992 114 aa6.34□□□□□ -1.39
LIG4-204ENST00000611712 GAGE2AQ6NT46 116 aa6.34□□□□□ -1.39
LIG4-204ENST00000611712 LRRC75A-AS1Q8N1F1 130 aa6.34□□□□□ -1.39
LIG4-204ENST00000611712 UBE2D4Q9Y2X8 147 aa6.34□□□□□ -1.39
LIG4-204ENST00000611712 WDFY3Q8IZQ1 3526 aa6.34□□□□□ -1.39
LIG4-204ENST00000611712 TRAV4A0A0B4J268 109 aa6.34□□□□□ -1.39
LIG4-204ENST00000611712 RS1O15537 224 aa6.34□□□□□ -1.39
LIG4-204ENST00000611712 TRIAP1O43715 76 aa6.34□□□□□ -1.39
LIG4-204ENST00000611712 MRPS36P82909 103 aaKnown RBP6.34□□□□□ -1.39
LIG4-204ENST00000611712 MT-ATP8P03928 68 aa6.33□□□□□ -1.4
LIG4-204ENST00000611712 KALRNO60229 2985 aa6.33□□□□□ -1.4
LIG4-204ENST00000611712 ZNF575Q86XF7 245 aa6.33□□□□□ -1.4
LIG4-204ENST00000611712 S100A7L2Q5SY68 101 aa6.33□□□□□ -1.4
LIG4-204ENST00000611712 ZNF843Q8N446 348 aa6.33□□□□□ -1.4
LIG4-204ENST00000611712 SND1-IT1Q9HBX3 110 aa6.33□□□□□ -1.4
LIG4-204ENST00000611712 MUC3AQ02505 3323 aa6.33□□□□□ -1.4
LIG4-204ENST00000611712 BAALC-AS2P0C853 105 aa6.32□□□□□ -1.4
LIG4-204ENST00000611712 GYPEP15421 78 aa6.32□□□□□ -1.4
LIG4-204ENST00000611712 OVOL2Q9BRP0 275 aa6.32□□□□□ -1.4
LIG4-204ENST00000611712 TACC2O95359 2948 aa6.32□□□□□ -1.4
LIG4-204ENST00000611712 TEX49A0A1B0GTD5 131 aa6.32□□□□□ -1.4
LIG4-204ENST00000611712 HIST2H2BCQ6DN03 193 aa6.32□□□□□ -1.4
LIG4-204ENST00000611712 COX7B2Q8TF08 81 aa6.32□□□□□ -1.4
LIG4-204ENST00000611712 F5H768 121 aa6.32□□□□□ -1.4
LIG4-204ENST00000611712 H3BT86 120 aa6.32□□□□□ -1.4
LIG4-204ENST00000611712 TIRAPP58753 221 aa6.32□□□□□ -1.4
LIG4-204ENST00000611712 DAD1P61803 113 aa6.32□□□□□ -1.4
LIG4-204ENST00000611712 ODF3L2Q3SX64 289 aa6.32□□□□□ -1.4
LIG4-204ENST00000611712 Q6ZSN1 163 aa6.32□□□□□ -1.4
LIG4-204ENST00000611712 INAFM2P0DMQ5 153 aa6.32□□□□□ -1.4
LIG4-204ENST00000611712 UBE2D3P61077 147 aa6.32□□□□□ -1.4
LIG4-204ENST00000611712 UBE2D2P62837 147 aa6.32□□□□□ -1.4
LIG4-204ENST00000611712 TRBV30A0A0K0K1B3 111 aa6.31□□□□□ -1.4
LIG4-204ENST00000611712 RBMY1FQ15415 496 aaKnown RBP6.31□□□□□ -1.4
LIG4-204ENST00000611712 WFDC10AQ9H1F0 79 aa6.31□□□□□ -1.4
LIG4-204ENST00000611712 ATMQ13315 3056 aa6.31□□□□□ -1.4
LIG4-204ENST00000611712 J3QKU1 62 aa6.31□□□□□ -1.4
LIG4-204ENST00000611712 ANGP03950 147 aaKnown RBP6.31□□□□□ -1.4
LIG4-204ENST00000611712 PIK3CD-AS1Q5SR53 167 aa6.31□□□□□ -1.4
LIG4-204ENST00000611712 MIR7-3HGQ8N6C7 128 aa6.31□□□□□ -1.4
LIG4-204ENST00000611712 SPATA25Q9BR10 227 aa6.31□□□□□ -1.4
LIG4-204ENST00000611712 NDUFA1O15239 70 aa6.31□□□□□ -1.4
LIG4-204ENST00000611712 CRLF1O75462 422 aa6.31□□□□□ -1.4
LIG4-204ENST00000611712 POM121L12Q8N7R1 296 aa6.31□□□□□ -1.4
LIG4-204ENST00000611712 LINC00308Q8TCZ7 52 aa6.31□□□□□ -1.4
LIG4-204ENST00000611712 CHCHD7Q9BUK0 85 aa6.31□□□□□ -1.4
LIG4-204ENST00000611712 AMELXQ99217 191 aa6.3□□□□□ -1.4
LIG4-204ENST00000611712 MUC4Q99102 2169 aa6.3□□□□□ -1.4
LIG4-204ENST00000611712 CFAP47Q6ZTR5 3102 aa6.3□□□□□ -1.4
LIG4-204ENST00000611712 ESM1Q9NQ30 184 aa6.3□□□□□ -1.4
LIG4-204ENST00000611712 LRBAP50851 2863 aa6.3□□□□□ -1.4
LIG4-204ENST00000611712 NDUFA7O95182 113 aa6.29□□□□□ -1.4
LIG4-204ENST00000611712 SPANXDQ9BXN6 97 aa6.29□□□□□ -1.4
LIG4-204ENST00000611712 SPANXCQ9NY87 97 aa6.29□□□□□ -1.4
LIG4-204ENST00000611712 ADAMTSL4-AS1Q5T5F5 129 aa6.29□□□□□ -1.4
LIG4-204ENST00000611712 IGLV10-54A0A075B6I4 117 aa6.28□□□□□ -1.4
LIG4-204ENST00000611712 LINC01006Q8NI28 216 aa6.28□□□□□ -1.4
LIG4-204ENST00000611712 Q9UF83 564 aa6.28□□□□□ -1.4
LIG4-204ENST00000611712 LOC100131303A0A0U1RQF7 123 aa6.28□□□□□ -1.4
LIG4-204ENST00000611712 DEFB4AO15263 64 aa6.28□□□□□ -1.4
LIG4-204ENST00000611712 XGP55808 180 aa6.28□□□□□ -1.4
LIG4-204ENST00000611712 LINC00242Q5T6M2 205 aa6.28□□□□□ -1.4
LIG4-204ENST00000611712 C1orf158Q8N1D5 194 aa6.28□□□□□ -1.4
LIG4-204ENST00000611712 DMDP11532 3685 aa6.28□□□□□ -1.4
LIG4-204ENST00000611712 TIMM17BO60830 172 aa6.28□□□□□ -1.4
LIG4-204ENST00000611712 COX7A2LO14548 114 aa6.27□□□□□ -1.41
LIG4-204ENST00000611712 LINC00694P0DN24 101 aa6.27□□□□□ -1.41
LIG4-204ENST00000611712 APOC4P55056 127 aa6.27□□□□□ -1.41
LIG4-204ENST00000611712 B5MCH6 92 aa6.27□□□□□ -1.41
LIG4-204ENST00000611712 Q9HAA7 133 aa6.27□□□□□ -1.41
LIG4-204ENST00000611712 COX6A2Q02221 97 aa6.26□□□□□ -1.41
LIG4-204ENST00000611712 BEAN1Q3B7T3 259 aa6.26□□□□□ -1.41
LIG4-204ENST00000611712 TRAV26-1A0A087WT03 109 aa6.26□□□□□ -1.41
LIG4-204ENST00000611712 TRBV6-4A0A1B0GX49 114 aa6.26□□□□□ -1.41
LIG4-204ENST00000611712 DEFB135Q30KP9 77 aa6.26□□□□□ -1.41
LIG4-204ENST00000611712 BBC3Q96PG8 261 aaPredicted RBP6.26□□□□□ -1.41
LIG4-204ENST00000611712 PRO0461Q9UI25 63 aa6.26□□□□□ -1.41
LIG4-204ENST00000611712 HIST1H4AP62805 103 aaKnown RBP6.26□□□□□ -1.41
LIG4-204ENST00000611712 CDC42SE2Q9NRR3 84 aa6.26□□□□□ -1.41
LIG4-204ENST00000611712 LAMTOR3Q9UHA4 124 aa6.26□□□□□ -1.41
LIG4-204ENST00000611712 TRBV6-8A0A0A6YYG3 113 aa6.25□□□□□ -1.41
LIG4-204ENST00000611712 H0YGX0 51 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms