RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 GAGE13Q4V321 117 aa9.72□□□□□ -0.85
NEK3-205ENST00000610828 SPATA3Q8NHX4 192 aa9.72□□□□□ -0.85
NEK3-205ENST00000610828 DGAT2L7PQ6IED9 249 aa9.72□□□□□ -0.85
NEK3-205ENST00000610828 OCIAD2Q56VL3 154 aa9.71□□□□□ -0.85
NEK3-205ENST00000610828 DAZ4Q86SG3 579 aaKnown RBP9.71□□□□□ -0.86
NEK3-205ENST00000610828 OVOL2Q9BRP0 275 aa9.71□□□□□ -0.86
NEK3-205ENST00000610828 DAZ3Q9NR90 486 aaKnown RBP9.71□□□□□ -0.86
NEK3-205ENST00000610828 TINCRA0A1B0GVN0 87 aa9.7□□□□□ -0.86
NEK3-205ENST00000610828 UBE2D3P61077 147 aa9.7□□□□□ -0.86
NEK3-205ENST00000610828 UBE2D2P62837 147 aa9.7□□□□□ -0.86
NEK3-205ENST00000610828 TIMM21Q9BVV7 248 aa9.7□□□□□ -0.86
NEK3-205ENST00000610828 TENM1Q9UKZ4 2725 aa9.7□□□□□ -0.86
NEK3-205ENST00000610828 IGLL5B9A064 214 aa9.7□□□□□ -0.86
NEK3-205ENST00000610828 INSL3P51460 131 aa9.7□□□□□ -0.86
NEK3-205ENST00000610828 TRAV8-3A0A0A6YYJ7 113 aa9.69□□□□□ -0.86
NEK3-205ENST00000610828 TRGV4A0A0C4DH28 118 aa9.69□□□□□ -0.86
NEK3-205ENST00000610828 A0A1B0GWB2 263 aa9.69□□□□□ -0.86
NEK3-205ENST00000610828 LINC00694P0DN24 101 aa9.69□□□□□ -0.86
NEK3-205ENST00000610828 IGHV3-30-3P0DP02 117 aa9.69□□□□□ -0.86
NEK3-205ENST00000610828 C9orf66Q5T8R8 295 aa9.69□□□□□ -0.86
NEK3-205ENST00000610828 NTM-AS1Q6ZSK4 140 aa9.69□□□□□ -0.86
NEK3-205ENST00000610828 CRLF1O75462 422 aa9.68□□□□□ -0.86
NEK3-205ENST00000610828 OR5A1Q8NGJ0 315 aa9.68□□□□□ -0.86
NEK3-205ENST00000610828 GEMIN7Q9H840 131 aaKnown RBP9.68□□□□□ -0.86
NEK3-205ENST00000610828 SPANXB1Q9NS25 103 aaPredicted RBP9.68□□□□□ -0.86
NEK3-205ENST00000610828 LOC100131303A0A0U1RQF7 123 aa9.68□□□□□ -0.86
NEK3-205ENST00000610828 UBE2D1P51668 147 aa9.67□□□□□ -0.86
NEK3-205ENST00000610828 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.67□□□□□ -0.86
NEK3-205ENST00000610828 TRBV6-4A0A1B0GX49 114 aa9.67□□□□□ -0.86
NEK3-205ENST00000610828 IGHV3-30P01768 117 aa9.67□□□□□ -0.86
NEK3-205ENST00000610828 IGHV3-30-5P0DP03 117 aa9.67□□□□□ -0.86
NEK3-205ENST00000610828 IGHV1-58A0A0C4DH39 117 aa9.66□□□□□ -0.86
NEK3-205ENST00000610828 SPINK8P0C7L1 97 aa9.66□□□□□ -0.86
NEK3-205ENST00000610828 TRRAPQ9Y4A5 3859 aa9.66□□□□□ -0.86
NEK3-205ENST00000610828 APOMO95445 188 aa9.66□□□□□ -0.86
NEK3-205ENST00000610828 DEFB130BP0DP73 79 aa9.66□□□□□ -0.86
NEK3-205ENST00000610828 DEFB130AP0DP74 79 aa9.66□□□□□ -0.86
NEK3-205ENST00000610828 C10orf126Q8N4M7 172 aa9.66□□□□□ -0.86
NEK3-205ENST00000610828 PGPEP1Q9NXJ5 209 aa9.65□□□□□ -0.86
NEK3-205ENST00000610828 CDKN2A-AS1Q9UH64 79 aa9.65□□□□□ -0.86
NEK3-205ENST00000610828 ATRQ13535 2644 aa9.65□□□□□ -0.86
NEK3-205ENST00000610828 A8MZ25 164 aa9.65□□□□□ -0.87
NEK3-205ENST00000610828 K7ERU9 68 aa9.65□□□□□ -0.87
NEK3-205ENST00000610828 UBE2L6O14933 153 aa9.65□□□□□ -0.87
NEK3-205ENST00000610828 FHL2Q14192 279 aa9.65□□□□□ -0.87
NEK3-205ENST00000610828 VSIG2Q96IQ7 327 aa9.65□□□□□ -0.87
NEK3-205ENST00000610828 CITED1Q99966 193 aa9.65□□□□□ -0.87
NEK3-205ENST00000610828 SBSPONQ8IVN8 264 aa9.64□□□□□ -0.87
NEK3-205ENST00000610828 VPS25Q9BRG1 176 aa9.64□□□□□ -0.87
NEK3-205ENST00000610828 NBEAL2Q6ZNJ1 2754 aa9.64□□□□□ -0.87
NEK3-205ENST00000610828 A0A0J9YXY3 114 aa9.64□□□□□ -0.87
NEK3-205ENST00000610828 TMEM243Q9BU79 118 aa9.64□□□□□ -0.87
NEK3-205ENST00000610828 GTSF1LQ9H1H1 148 aa9.64□□□□□ -0.87
NEK3-205ENST00000610828 CSDC2Q9Y534 153 aaKnown RBP9.64□□□□□ -0.87
NEK3-205ENST00000610828 TRAV13-1A0A0B4J241 112 aa9.63□□□□□ -0.87
NEK3-205ENST00000610828 TMEM238C9JI98 176 aa9.63□□□□□ -0.87
NEK3-205ENST00000610828 COX6A2Q02221 97 aa9.63□□□□□ -0.87
NEK3-205ENST00000610828 NDUFA12Q9UI09 145 aa9.63□□□□□ -0.87
NEK3-205ENST00000610828 TEP1Q99973 2627 aaKnown RBP9.63□□□□□ -0.87
NEK3-205ENST00000610828 TIRAPP58753 221 aa9.63□□□□□ -0.87
NEK3-205ENST00000610828 SMAGPQ0VAQ4 97 aa9.63□□□□□ -0.87
NEK3-205ENST00000610828 X6R8D5 127 aa9.63□□□□□ -0.87
NEK3-205ENST00000610828 HERVK_113P63121 156 aa9.62□□□□□ -0.87
NEK3-205ENST00000610828 LINC00242Q5T6M2 205 aa9.62□□□□□ -0.87
NEK3-205ENST00000610828 KIR2DL5BQ8NHK3 375 aa9.62□□□□□ -0.87
NEK3-205ENST00000610828 CDC42SE2Q9NRR3 84 aa9.62□□□□□ -0.87
NEK3-205ENST00000610828 IGLV5-45A0A087WSX0 123 aa9.61□□□□□ -0.87
NEK3-205ENST00000610828 CFC1BP0CG36 223 aa9.61□□□□□ -0.87
NEK3-205ENST00000610828 CFC1P0CG37 223 aa9.61□□□□□ -0.87
NEK3-205ENST00000610828 TMEM101Q96IK0 257 aa9.61□□□□□ -0.87
NEK3-205ENST00000610828 DEFB135Q30KP9 77 aa9.6□□□□□ -0.87
NEK3-205ENST00000610828 SFTA2Q6UW10 78 aa9.6□□□□□ -0.87
NEK3-205ENST00000610828 MUSTN1Q8IVN3 82 aa9.6□□□□□ -0.87
NEK3-205ENST00000610828 A4D1N5 150 aa9.6□□□□□ -0.87
NEK3-205ENST00000610828 SMIM9A6NGZ8 99 aa9.6□□□□□ -0.87
NEK3-205ENST00000610828 TSPAN13O95857 204 aa9.6□□□□□ -0.87
NEK3-205ENST00000610828 H3BMG7 143 aa9.59□□□□□ -0.87
NEK3-205ENST00000610828 RPL24P83731 157 aaKnown RBP9.59□□□□□ -0.87
NEK3-205ENST00000610828 ZFAND6Q6FIF0 208 aa9.59□□□□□ -0.87
NEK3-205ENST00000610828 GAGE6Q13070 117 aa9.59□□□□□ -0.87
NEK3-205ENST00000610828 LINC00612Q8N6U2 182 aa9.59□□□□□ -0.87
NEK3-205ENST00000610828 TRBV6-8A0A0A6YYG3 113 aa9.58□□□□□ -0.88
NEK3-205ENST00000610828 LITAFQ99732 161 aa9.58□□□□□ -0.88
NEK3-205ENST00000610828 LOC107984156A0A0G2JMH3 177 aa9.58□□□□□ -0.88
NEK3-205ENST00000610828 PRSS2P07478 247 aa9.58□□□□□ -0.88
NEK3-205ENST00000610828 APOC4P55056 127 aa9.58□□□□□ -0.88
NEK3-205ENST00000610828 FAM222AQ5U5X8 452 aa9.58□□□□□ -0.88
NEK3-205ENST00000610828 FAM19A3Q7Z5A8 133 aa9.58□□□□□ -0.88
NEK3-205ENST00000610828 ARL17AQ8IVW1 177 aa9.58□□□□□ -0.88
NEK3-205ENST00000610828 H7C423 109 aa9.57□□□□□ -0.88
NEK3-205ENST00000610828 DEFB4AO15263 64 aa9.57□□□□□ -0.88
NEK3-205ENST00000610828 ADAMTSL4-AS1Q5T5F5 129 aa9.57□□□□□ -0.88
NEK3-205ENST00000610828 MTURNQ8N3F0 131 aa9.57□□□□□ -0.88
NEK3-205ENST00000610828 CHCHD5Q9BSY4 110 aa9.57□□□□□ -0.88
NEK3-205ENST00000610828 PRO1854Q9UHT4 67 aa9.57□□□□□ -0.88
NEK3-205ENST00000610828 F8P00451 2351 aa9.56□□□□□ -0.88
NEK3-205ENST00000610828 GYPEP15421 78 aa9.56□□□□□ -0.88
NEK3-205ENST00000610828 IGKV3OR2-268A0A0C4DH90 116 aa9.56□□□□□ -0.88
NEK3-205ENST00000610828 IGLV5-39A0A0G2JS06 123 aa9.56□□□□□ -0.88
NEK3-205ENST00000610828 SMIM1B2RUZ4 78 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 252.3 ms