RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 TPRXLQ17RH7 258 aa1.73□□□□□ -2.13
SMCHD1-213ENST00000609587 TMEM170BQ5T4T1 132 aa1.73□□□□□ -2.13
SMCHD1-213ENST00000609587 RPL7L1Q6DKI1 246 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-213ENST00000609587 Q6ZTI0 123 aa1.73□□□□□ -2.13
SMCHD1-213ENST00000609587 PATE1Q8WXA2 126 aa1.73□□□□□ -2.13
SMCHD1-213ENST00000609587 LIMD2Q9BT23 127 aa1.73□□□□□ -2.13
SMCHD1-213ENST00000609587 ZGRF1Q86YA3 2104 aa1.73□□□□□ -2.13
SMCHD1-213ENST00000609587 CTTNBP2Q8WZ74 1663 aa1.73□□□□□ -2.13
SMCHD1-213ENST00000609587 PIK3C2BO00750 1634 aa1.73□□□□□ -2.13
SMCHD1-213ENST00000609587 ZFHX2Q9C0A1 2572 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-213ENST00000609587 EHBP1L1Q8N3D4 1523 aa1.72□□□□□ -2.13
SMCHD1-213ENST00000609587 IGKV3-7A0A075B6H7 116 aa1.72□□□□□ -2.13
SMCHD1-213ENST00000609587 TMEM14DPA8MWL7 114 aa1.72□□□□□ -2.13
SMCHD1-213ENST00000609587 AFDNP55196 1824 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-213ENST00000609587 DLG5Q8TDM6 1919 aa1.72□□□□□ -2.13
SMCHD1-213ENST00000609587 XRN1Q8IZH2 1706 aaKnown RBP1.71□□□□□ -2.13
SMCHD1-213ENST00000609587 RP1P56715 2156 aa1.71□□□□□ -2.14
SMCHD1-213ENST00000609587 MED12Q93074 2177 aa1.71□□□□□ -2.14
SMCHD1-213ENST00000609587 IGLV3-32A0A0A0MS00 114 aa1.71□□□□□ -2.14
SMCHD1-213ENST00000609587 TMEM30CPA0ZSE6 113 aa1.71□□□□□ -2.14
SMCHD1-213ENST00000609587 J3QKU1 62 aa1.71□□□□□ -2.14
SMCHD1-213ENST00000609587 IGHV3-30P01768 117 aa1.71□□□□□ -2.14
SMCHD1-213ENST00000609587 TFF1P04155 84 aa1.71□□□□□ -2.14
SMCHD1-213ENST00000609587 HMGN2P05204 90 aaKnown RBP1.71□□□□□ -2.14
SMCHD1-213ENST00000609587 SFTA3P0C7M3 94 aa1.71□□□□□ -2.14
SMCHD1-213ENST00000609587 SMIM13P0DJ93 91 aa1.71□□□□□ -2.14
SMCHD1-213ENST00000609587 IGHV3-30-5P0DP03 117 aa1.71□□□□□ -2.14
SMCHD1-213ENST00000609587 DMAC1Q96GE9 116 aa1.71□□□□□ -2.14
SMCHD1-213ENST00000609587 MANBALQ9NQG1 85 aa1.71□□□□□ -2.14
SMCHD1-213ENST00000609587 NDUFA4L2Q9NRX3 87 aa1.71□□□□□ -2.14
SMCHD1-213ENST00000609587 DOCK11Q5JSL3 2073 aa1.71□□□□□ -2.14
SMCHD1-213ENST00000609587 CEP170BQ9Y4F5 1589 aaPredicted RBP1.71□□□□□ -2.14
SMCHD1-213ENST00000609587 ARFGEF3Q5TH69 2177 aa1.71□□□□□ -2.14
SMCHD1-213ENST00000609587 MROH2AA6NES4 1674 aa1.71□□□□□ -2.14
SMCHD1-213ENST00000609587 CFAP43Q8NDM7 1665 aa1.71□□□□□ -2.14
SMCHD1-213ENST00000609587 ALKQ9UM73 1620 aa1.7□□□□□ -2.14
SMCHD1-213ENST00000609587 UMAD1C9J7I0 102 aa1.7□□□□□ -2.14
SMCHD1-213ENST00000609587 COX6CP09669 75 aa1.7□□□□□ -2.14
SMCHD1-213ENST00000609587 DEFB132Q7Z7B7 95 aa1.7□□□□□ -2.14
SMCHD1-213ENST00000609587 CLECL1Q8IZS7 167 aa1.7□□□□□ -2.14
SMCHD1-213ENST00000609587 SPACA4Q8TDM5 124 aa1.7□□□□□ -2.14
SMCHD1-213ENST00000609587 TMEM14BQ9NUH8 114 aa1.7□□□□□ -2.14
SMCHD1-213ENST00000609587 MAST1Q9Y2H9 1570 aa1.7□□□□□ -2.14
SMCHD1-213ENST00000609587 TRBV6-7A0A0A0MS04 114 aa1.69□□□□□ -2.14
SMCHD1-213ENST00000609587 FAM223BA6NKX1 122 aa1.69□□□□□ -2.14
SMCHD1-213ENST00000609587 IQCF6A8MYZ5 107 aa1.69□□□□□ -2.14
SMCHD1-213ENST00000609587 CHKB-CPT1BH3BT56 60 aa1.69□□□□□ -2.14
SMCHD1-213ENST00000609587 COX8AP10176 69 aa1.69□□□□□ -2.14
SMCHD1-213ENST00000609587 EDDM3BP56851 147 aa1.69□□□□□ -2.14
SMCHD1-213ENST00000609587 SMIM11AP58511 58 aa1.69□□□□□ -2.14
SMCHD1-213ENST00000609587 KRTAP12-1P59990 96 aa1.69□□□□□ -2.14
SMCHD1-213ENST00000609587 ELOF1P60002 83 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-213ENST00000609587 DEFB103AP81534 67 aa1.69□□□□□ -2.14
SMCHD1-213ENST00000609587 ZNF56Q15929 161 aa1.69□□□□□ -2.14
SMCHD1-213ENST00000609587 C10orf128Q5T292 105 aa1.69□□□□□ -2.14
SMCHD1-213ENST00000609587 Q86TA4 180 aa1.69□□□□□ -2.14
SMCHD1-213ENST00000609587 TXNDC17Q9BRA2 123 aa1.69□□□□□ -2.14
SMCHD1-213ENST00000609587 SIPA1L3O60292 1781 aaPredicted RBP1.69□□□□□ -2.14
SMCHD1-213ENST00000609587 LRRC37A3O60309 1634 aa1.69□□□□□ -2.14
SMCHD1-213ENST00000609587 RALGAPBQ86X10 1494 aa1.69□□□□□ -2.14
SMCHD1-213ENST00000609587 FBN1P35555 2871 aaKnown RBP1.69□□□□□ -2.14
SMCHD1-213ENST00000609587 NRXN2Q9P2S2 1712 aa1.69□□□□□ -2.14
SMCHD1-213ENST00000609587 CDC42BPGQ6DT37 1551 aa1.68□□□□□ -2.14
SMCHD1-213ENST00000609587 ARFGEF1Q9Y6D6 1849 aa1.68□□□□□ -2.14
SMCHD1-213ENST00000609587 ABCA4P78363 2273 aa1.68□□□□□ -2.14
SMCHD1-213ENST00000609587 TRBV6-8A0A0A6YYG3 113 aa1.68□□□□□ -2.14
SMCHD1-213ENST00000609587 F8WEM9 126 aa1.68□□□□□ -2.14
SMCHD1-213ENST00000609587 HMGN4O00479 90 aa1.68□□□□□ -2.14
SMCHD1-213ENST00000609587 PDE6GP18545 87 aa1.68□□□□□ -2.14
SMCHD1-213ENST00000609587 C20orf197Q8N268 126 aa1.68□□□□□ -2.14
SMCHD1-213ENST00000609587 TTTY12Q9BZ98 90 aa1.68□□□□□ -2.14
SMCHD1-213ENST00000609587 HEATR1Q9H583 2144 aaKnown RBP1.68□□□□□ -2.14
SMCHD1-213ENST00000609587 LENEPQ9Y5L5 61 aa1.68□□□□□ -2.14
SMCHD1-213ENST00000609587 PAPPAQ13219 1627 aa1.68□□□□□ -2.14
SMCHD1-213ENST00000609587 UNC13CQ8NB66 2214 aa1.67□□□□□ -2.14
SMCHD1-213ENST00000609587 OTOGLQ3ZCN5 2332 aa1.67□□□□□ -2.14
SMCHD1-213ENST00000609587 BRWD1Q9NSI6 2320 aa1.67□□□□□ -2.14
SMCHD1-213ENST00000609587 COL4A2P08572 1712 aa1.67□□□□□ -2.14
SMCHD1-213ENST00000609587 A0A0G2JQZ4 141 aa1.67□□□□□ -2.14
SMCHD1-213ENST00000609587 MYMXA0A1B0GTQ4 84 aa1.67□□□□□ -2.14
SMCHD1-213ENST00000609587 HIGD1CA8MV81 97 aa1.67□□□□□ -2.14
SMCHD1-213ENST00000609587 IGLV3-1P01715 115 aa1.67□□□□□ -2.14
SMCHD1-213ENST00000609587 RNASE3P12724 160 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-213ENST00000609587 PROK2Q9HC23 129 aa1.67□□□□□ -2.14
SMCHD1-213ENST00000609587 DYNLRB1Q9NP97 96 aa1.67□□□□□ -2.14
SMCHD1-213ENST00000609587 PSENENQ9NZ42 101 aa1.67□□□□□ -2.14
SMCHD1-213ENST00000609587 PLAC8Q9NZF1 115 aa1.67□□□□□ -2.14
SMCHD1-213ENST00000609587 MRPL36Q9P0J6 103 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-213ENST00000609587 ORMDL1Q9P0S3 153 aa1.67□□□□□ -2.14
SMCHD1-213ENST00000609587 UBE2D4Q9Y2X8 147 aa1.67□□□□□ -2.14
SMCHD1-213ENST00000609587 LAMA4Q16363 1823 aa1.67□□□□□ -2.14
SMCHD1-213ENST00000609587 SCN7AQ01118 1682 aa1.67□□□□□ -2.14
SMCHD1-213ENST00000609587 DLEC1Q9Y238 1755 aa1.67□□□□□ -2.14
SMCHD1-213ENST00000609587 PDCD11Q14690 1871 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-213ENST00000609587 SYCP2Q9BX26 1530 aa1.66□□□□□ -2.14
SMCHD1-213ENST00000609587 LAMC1P11047 1609 aa1.66□□□□□ -2.14
SMCHD1-213ENST00000609587 ESPL1Q14674 2120 aa1.66□□□□□ -2.14
SMCHD1-213ENST00000609587 TET1Q8NFU7 2136 aa1.66□□□□□ -2.14
SMCHD1-213ENST00000609587 SPAG17Q6Q759 2223 aa1.66□□□□□ -2.14
SMCHD1-213ENST00000609587 SAA2P0DJI9 122 aaPredicted RBP1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms