RNA–Protein interactions for RNA: ENST00000579795.5

FOXN1-203, Transcript of forkhead box N1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN1, Length 2,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1-203ENST00000579795 NOTCH3Q9UM47 2321 aa11.81□□□□□ -0.52
FOXN1-203ENST00000579795 GAGE12JA6NER3 117 aa11.81□□□□□ -0.52
FOXN1-203ENST00000579795 TMEM238C9JI98 176 aa11.81□□□□□ -0.52
FOXN1-203ENST00000579795 UBE2D3P61077 147 aa11.81□□□□□ -0.52
FOXN1-203ENST00000579795 UBE2D2P62837 147 aa11.81□□□□□ -0.52
FOXN1-203ENST00000579795 GAGE4Q13068 117 aa11.81□□□□□ -0.52
FOXN1-203ENST00000579795 GAGE5Q13069 117 aa11.81□□□□□ -0.52
FOXN1-203ENST00000579795 GAGE13Q4V321 117 aa11.81□□□□□ -0.52
FOXN1-203ENST00000579795 C10orf126Q8N4M7 172 aa11.81□□□□□ -0.52
FOXN1-203ENST00000579795 LINC00482Q8N8I6 264 aa11.81□□□□□ -0.52
FOXN1-203ENST00000579795 OVOL2Q9BRP0 275 aa11.81□□□□□ -0.52
FOXN1-203ENST00000579795 CIDEAO60543 219 aa11.8□□□□□ -0.52
FOXN1-203ENST00000579795 VSIG2Q96IQ7 327 aa11.8□□□□□ -0.52
FOXN1-203ENST00000579795 GCN1Q92616 2671 aaKnown RBP11.8□□□□□ -0.52
FOXN1-203ENST00000579795 A0A0J9YXY3 114 aa11.79□□□□□ -0.52
FOXN1-203ENST00000579795 H3BMG7 143 aa11.79□□□□□ -0.52
FOXN1-203ENST00000579795 SPINK8P0C7L1 97 aa11.79□□□□□ -0.52
FOXN1-203ENST00000579795 CFC1BP0CG36 223 aa11.79□□□□□ -0.52
FOXN1-203ENST00000579795 CFC1P0CG37 223 aa11.79□□□□□ -0.52
FOXN1-203ENST00000579795 HECTD1Q9ULT8 2610 aa11.79□□□□□ -0.52
FOXN1-203ENST00000579795 TSPAN13O95857 204 aa11.78□□□□□ -0.52
FOXN1-203ENST00000579795 TIRAPP58753 221 aa11.78□□□□□ -0.52
FOXN1-203ENST00000579795 RPL24P83731 157 aaKnown RBP11.78□□□□□ -0.52
FOXN1-203ENST00000579795 SMAGPQ0VAQ4 97 aa11.78□□□□□ -0.52
FOXN1-203ENST00000579795 NDUFA12Q9UI09 145 aa11.78□□□□□ -0.52
FOXN1-203ENST00000579795 CSDC2Q9Y534 153 aaKnown RBP11.78□□□□□ -0.52
FOXN1-203ENST00000579795 F8W1H4 67 aa11.78□□□□□ -0.52
FOXN1-203ENST00000579795 LINC00694P0DN24 101 aa11.78□□□□□ -0.52
FOXN1-203ENST00000579795 NTM-AS1Q6ZSK4 140 aa11.78□□□□□ -0.52
FOXN1-203ENST00000579795 TRBV6-4A0A1B0GX49 114 aa11.77□□□□□ -0.52
FOXN1-203ENST00000579795 INAFM1C9JVW0 142 aa11.77□□□□□ -0.52
FOXN1-203ENST00000579795 IGLV5-45A0A087WSX0 123 aa11.77□□□□□ -0.53
FOXN1-203ENST00000579795 TRGV4A0A0C4DH28 118 aa11.77□□□□□ -0.53
FOXN1-203ENST00000579795 CDKN2A-AS1Q9UH64 79 aa11.77□□□□□ -0.53
FOXN1-203ENST00000579795 A4D1N5 150 aa11.76□□□□□ -0.53
FOXN1-203ENST00000579795 LYRM7Q5U5X0 104 aa11.76□□□□□ -0.53
FOXN1-203ENST00000579795 GTSF1LQ9H1H1 148 aa11.76□□□□□ -0.53
FOXN1-203ENST00000579795 NOTCH2Q04721 2471 aa11.76□□□□□ -0.53
FOXN1-203ENST00000579795 LOC107984156A0A0G2JMH3 177 aa11.75□□□□□ -0.53
FOXN1-203ENST00000579795 HERVK_113P63121 156 aa11.75□□□□□ -0.53
FOXN1-203ENST00000579795 MUSTN1Q8IVN3 82 aa11.75□□□□□ -0.53
FOXN1-203ENST00000579795 ARL17AQ8IVW1 177 aa11.75□□□□□ -0.53
FOXN1-203ENST00000579795 VPS25Q9BRG1 176 aa11.75□□□□□ -0.53
FOXN1-203ENST00000579795 PRO1854Q9UHT4 67 aa11.75□□□□□ -0.53
FOXN1-203ENST00000579795 UBE2L6O14933 153 aa11.75□□□□□ -0.53
FOXN1-203ENST00000579795 SBSPONQ8IVN8 264 aa11.75□□□□□ -0.53
FOXN1-203ENST00000579795 INSL3P51460 131 aa11.74□□□□□ -0.53
FOXN1-203ENST00000579795 ZFAND6Q6FIF0 208 aa11.74□□□□□ -0.53
FOXN1-203ENST00000579795 TMEM243Q9BU79 118 aa11.74□□□□□ -0.53
FOXN1-203ENST00000579795 A8MZ25 164 aa11.74□□□□□ -0.53
FOXN1-203ENST00000579795 LINC00242Q5T6M2 205 aa11.74□□□□□ -0.53
FOXN1-203ENST00000579795 SFTA2Q6UW10 78 aa11.74□□□□□ -0.53
FOXN1-203ENST00000579795 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.73□□□□□ -0.53
FOXN1-203ENST00000579795 COX6A2Q02221 97 aa11.73□□□□□ -0.53
FOXN1-203ENST00000579795 TRAV13-1A0A0B4J241 112 aa11.72□□□□□ -0.53
FOXN1-203ENST00000579795 LOC100131303A0A0U1RQF7 123 aa11.72□□□□□ -0.53
FOXN1-203ENST00000579795 WFDC2Q14508 124 aa11.72□□□□□ -0.53
FOXN1-203ENST00000579795 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.72□□□□□ -0.53
FOXN1-203ENST00000579795 TMEM101Q96IK0 257 aa11.72□□□□□ -0.53
FOXN1-203ENST00000579795 LITAFQ99732 161 aa11.72□□□□□ -0.53
FOXN1-203ENST00000579795 CDC42SE2Q9NRR3 84 aa11.72□□□□□ -0.53
FOXN1-203ENST00000579795 A0A0B4J2C4 111 aa11.72□□□□□ -0.53
FOXN1-203ENST00000579795 G3V4G9 280 aa11.72□□□□□ -0.53
FOXN1-203ENST00000579795 CRLF1O75462 422 aa11.72□□□□□ -0.53
FOXN1-203ENST00000579795 PRSS2P07478 247 aa11.72□□□□□ -0.53
FOXN1-203ENST00000579795 FAM19A3Q7Z5A8 133 aa11.72□□□□□ -0.53
FOXN1-203ENST00000579795 OTOGQ6ZRI0 2925 aa11.72□□□□□ -0.53
FOXN1-203ENST00000579795 FHL2Q14192 279 aa11.71□□□□□ -0.53
FOXN1-203ENST00000579795 C9orf66Q5T8R8 295 aa11.71□□□□□ -0.53
FOXN1-203ENST00000579795 PSMB2P49721 201 aa11.71□□□□□ -0.54
FOXN1-203ENST00000579795 SPANXDQ9BXN6 97 aa11.71□□□□□ -0.54
FOXN1-203ENST00000579795 SPANXCQ9NY87 97 aa11.71□□□□□ -0.54
FOXN1-203ENST00000579795 H7C423 109 aa11.7□□□□□ -0.54
FOXN1-203ENST00000579795 TEX48A0A1B0GUV7 120 aa11.69□□□□□ -0.54
FOXN1-203ENST00000579795 NDUFA1O15239 70 aa11.69□□□□□ -0.54
FOXN1-203ENST00000579795 DEFB130BP0DP73 79 aa11.69□□□□□ -0.54
FOXN1-203ENST00000579795 DEFB130AP0DP74 79 aa11.69□□□□□ -0.54
FOXN1-203ENST00000579795 ADAMTSL4-AS1Q5T5F5 129 aa11.69□□□□□ -0.54
FOXN1-203ENST00000579795 MTURNQ8N3F0 131 aa11.69□□□□□ -0.54
FOXN1-203ENST00000579795 KIR2DL5BQ8NHK3 375 aa11.69□□□□□ -0.54
FOXN1-203ENST00000579795 PRO0461Q9UI25 63 aa11.69□□□□□ -0.54
FOXN1-203ENST00000579795 MIAQ16674 131 aa11.69□□□□□ -0.54
FOXN1-203ENST00000579795 TRBV20-1A0A075B6N2 111 aa11.68□□□□□ -0.54
FOXN1-203ENST00000579795 IGLV5-39A0A0G2JS06 123 aa11.68□□□□□ -0.54
FOXN1-203ENST00000579795 TIMM17BO60830 172 aa11.68□□□□□ -0.54
FOXN1-203ENST00000579795 SCGB1C2P0DMR2 95 aa11.68□□□□□ -0.54
FOXN1-203ENST00000579795 ERG28Q9UKR5 140 aa11.68□□□□□ -0.54
FOXN1-203ENST00000579795 C2CD3Q4AC94 2353 aa11.68□□□□□ -0.54
FOXN1-203ENST00000579795 EIF4EBP3O60516 100 aaPredicted RBP11.68□□□□□ -0.54
FOXN1-203ENST00000579795 IGHV3-33P01772 117 aa11.68□□□□□ -0.54
FOXN1-203ENST00000579795 FN1P02751 2386 aaKnown RBP11.67□□□□□ -0.54
FOXN1-203ENST00000579795 ETDBQ3ZM63 59 aa11.67□□□□□ -0.54
FOXN1-203ENST00000579795 SMIM9A6NGZ8 99 aa11.66□□□□□ -0.54
FOXN1-203ENST00000579795 SMIM1B2RUZ4 78 aa11.66□□□□□ -0.54
FOXN1-203ENST00000579795 CIRBPQ14011 172 aaKnown RBP11.66□□□□□ -0.54
FOXN1-203ENST00000579795 SPATA3Q8NHX4 192 aa11.66□□□□□ -0.54
FOXN1-203ENST00000579795 TRBV6-8A0A0A6YYG3 113 aa11.66□□□□□ -0.54
FOXN1-203ENST00000579795 H7C2G1 150 aa11.66□□□□□ -0.54
FOXN1-203ENST00000579795 LINC00612Q8N6U2 182 aa11.66□□□□□ -0.54
FOXN1-203ENST00000579795 GAGE6Q13070 117 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 233.6 ms