RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 COL6A5A8TX70 2615 aa1.91□□□□□ -2.1
CALCOCO2-226ENST00000575461 ZMYM4Q5VZL5 1548 aa1.91□□□□□ -2.1
CALCOCO2-226ENST00000575461 CELSR3Q9NYQ7 3312 aa1.91□□□□□ -2.1
CALCOCO2-226ENST00000575461 MED14O60244 1454 aa1.9□□□□□ -2.11
CALCOCO2-226ENST00000575461 SPINK7P58062 85 aa1.9□□□□□ -2.11
CALCOCO2-226ENST00000575461 IFT172Q9UG01 1749 aa1.9□□□□□ -2.11
CALCOCO2-226ENST00000575461 SCAPERQ9BY12 1400 aa1.9□□□□□ -2.11
CALCOCO2-226ENST00000575461 WDFY4Q6ZS81 3184 aa1.9□□□□□ -2.11
CALCOCO2-226ENST00000575461 CFAP46Q8IYW2 2715 aa1.89□□□□□ -2.11
CALCOCO2-226ENST00000575461 LAMC3Q9Y6N6 1575 aa1.89□□□□□ -2.11
CALCOCO2-226ENST00000575461 GOLGA3Q08378 1498 aa1.89□□□□□ -2.11
CALCOCO2-226ENST00000575461 SPHKAPQ2M3C7 1700 aa1.89□□□□□ -2.11
CALCOCO2-226ENST00000575461 STAB1Q9NY15 2570 aa1.89□□□□□ -2.11
CALCOCO2-226ENST00000575461 SPATA8Q6RVD6 105 aa1.89□□□□□ -2.11
CALCOCO2-226ENST00000575461 RANBP2P49792 3224 aaKnown RBP1.89□□□□□ -2.11
CALCOCO2-226ENST00000575461 VWFP04275 2813 aa1.89□□□□□ -2.11
CALCOCO2-226ENST00000575461 GOLGB1Q14789 3259 aaKnown RBP1.88□□□□□ -2.11
CALCOCO2-226ENST00000575461 NBEAL2Q6ZNJ1 2754 aa1.88□□□□□ -2.11
CALCOCO2-226ENST00000575461 ANKHD1Q8IWZ3 2542 aaKnown RBP1.88□□□□□ -2.11
CALCOCO2-226ENST00000575461 SPG11Q96JI7 2443 aa1.88□□□□□ -2.11
CALCOCO2-226ENST00000575461 NOTCH1P46531 2555 aa1.88□□□□□ -2.11
CALCOCO2-226ENST00000575461 ARHGAP5Q13017 1502 aa1.88□□□□□ -2.11
CALCOCO2-226ENST00000575461 TMEM262E9PQX1 116 aa1.88□□□□□ -2.11
CALCOCO2-226ENST00000575461 M0R135 149 aa1.88□□□□□ -2.11
CALCOCO2-226ENST00000575461 GNG11P61952 73 aa1.88□□□□□ -2.11
CALCOCO2-226ENST00000575461 MKI67P46013 3256 aaKnown RBP1.87□□□□□ -2.11
CALCOCO2-226ENST00000575461 LOC285095A0A1B0GVY8 99 aa1.87□□□□□ -2.11
CALCOCO2-226ENST00000575461 PROK2Q9HC23 129 aa1.87□□□□□ -2.11
CALCOCO2-226ENST00000575461 PI4KAP42356 2102 aa1.87□□□□□ -2.11
CALCOCO2-226ENST00000575461 POLQO75417 2590 aa1.86□□□□□ -2.11
CALCOCO2-226ENST00000575461 TRAV30A0A087WSZ9 112 aa1.86□□□□□ -2.11
CALCOCO2-226ENST00000575461 RYR1P21817 5038 aa1.86□□□□□ -2.11
CALCOCO2-226ENST00000575461 BPTFQ12830 3046 aa1.86□□□□□ -2.11
CALCOCO2-226ENST00000575461 TPRP12270 2363 aaKnown RBP1.86□□□□□ -2.11
CALCOCO2-226ENST00000575461 CCDC168Q8NDH2 2452 aa1.85□□□□□ -2.11
CALCOCO2-226ENST00000575461 SMIM4Q8WVI0 70 aa1.85□□□□□ -2.11
CALCOCO2-226ENST00000575461 RYR3Q15413 4870 aa1.84□□□□□ -2.11
CALCOCO2-226ENST00000575461 FAM208BQ5VWN6 2430 aa1.84□□□□□ -2.11
CALCOCO2-226ENST00000575461 CEP250Q9BV73 2442 aa1.84□□□□□ -2.11
CALCOCO2-226ENST00000575461 CTXND1A0A1B0GTU2 59 aa1.84□□□□□ -2.11
CALCOCO2-226ENST00000575461 CFAP126Q5VTH2 177 aa1.84□□□□□ -2.11
CALCOCO2-226ENST00000575461 LRRK2Q5S007 2527 aa1.83□□□□□ -2.12
CALCOCO2-226ENST00000575461 MRC2Q9UBG0 1479 aa1.83□□□□□ -2.12
CALCOCO2-226ENST00000575461 SHANK2Q9UPX8 1470 aa1.83□□□□□ -2.12
CALCOCO2-226ENST00000575461 REV3LO60673 3130 aa1.83□□□□□ -2.12
CALCOCO2-226ENST00000575461 DOCK11Q5JSL3 2073 aa1.83□□□□□ -2.12
CALCOCO2-226ENST00000575461 NAP1L6A6NFF2 107 aa1.83□□□□□ -2.12
CALCOCO2-226ENST00000575461 ACBD7Q8N6N7 88 aa1.83□□□□□ -2.12
CALCOCO2-226ENST00000575461 AMELXQ99217 191 aa1.83□□□□□ -2.12
CALCOCO2-226ENST00000575461 UQCR10Q9UDW1 63 aa1.83□□□□□ -2.12
CALCOCO2-226ENST00000575461 SMARCA2P51531 1590 aa1.83□□□□□ -2.12
CALCOCO2-226ENST00000575461 MUC2Q02817 5179 aa1.83□□□□□ -2.12
CALCOCO2-226ENST00000575461 DNAH12Q6ZR08 3092 aa1.82□□□□□ -2.12
CALCOCO2-226ENST00000575461 BIRC6Q9NR09 4857 aa1.82□□□□□ -2.12
CALCOCO2-226ENST00000575461 HMGN4O00479 90 aa1.82□□□□□ -2.12
CALCOCO2-226ENST00000575461 PIN1P1O15428 100 aa1.82□□□□□ -2.12
CALCOCO2-226ENST00000575461 MAP1BP46821 2468 aaKnown RBP1.82□□□□□ -2.12
CALCOCO2-226ENST00000575461 LRRC7Q96NW7 1537 aa1.81□□□□□ -2.12
CALCOCO2-226ENST00000575461 G3V318 75 aa1.81□□□□□ -2.12
CALCOCO2-226ENST00000575461 FAM167A-AS1Q96KT0 104 aa1.81□□□□□ -2.12
CALCOCO2-226ENST00000575461 CNTLNQ9NXG0 1405 aa1.81□□□□□ -2.12
CALCOCO2-226ENST00000575461 MUC3AQ02505 3323 aa1.81□□□□□ -2.12
CALCOCO2-226ENST00000575461 ALKQ9UM73 1620 aa1.8□□□□□ -2.12
CALCOCO2-226ENST00000575461 PSME4Q14997 1843 aa1.8□□□□□ -2.12
CALCOCO2-226ENST00000575461 F8VRH5 84 aa1.8□□□□□ -2.12
CALCOCO2-226ENST00000575461 CHKB-CPT1BH3BT56 60 aa1.8□□□□□ -2.12
CALCOCO2-226ENST00000575461 NMBP08949 121 aa1.8□□□□□ -2.12
CALCOCO2-226ENST00000575461 SNCAP37840 140 aa1.8□□□□□ -2.12
CALCOCO2-226ENST00000575461 ZFYVE26Q68DK2 2539 aa1.8□□□□□ -2.12
CALCOCO2-226ENST00000575461 IGSF10Q6WRI0 2623 aa1.8□□□□□ -2.12
CALCOCO2-226ENST00000575461 TCHHQ07283 1943 aa1.79□□□□□ -2.12
CALCOCO2-226ENST00000575461 RELNP78509 3460 aa1.79□□□□□ -2.12
CALCOCO2-226ENST00000575461 EP400Q96L91 3159 aa1.79□□□□□ -2.12
CALCOCO2-226ENST00000575461 CICQ96RK0 1608 aaPredicted RBP1.79□□□□□ -2.12
CALCOCO2-226ENST00000575461 SPTAN1Q13813 2472 aaKnown RBP1.79□□□□□ -2.12
CALCOCO2-226ENST00000575461 FBN2P35556 2912 aa1.79□□□□□ -2.12
CALCOCO2-226ENST00000575461 BRCA2P51587 3418 aa1.78□□□□□ -2.12
CALCOCO2-226ENST00000575461 SPEGQ15772 3267 aa1.78□□□□□ -2.12
CALCOCO2-226ENST00000575461 UQCR11O14957 56 aa1.78□□□□□ -2.12
CALCOCO2-226ENST00000575461 KRTDAPP60985 99 aa1.78□□□□□ -2.12
CALCOCO2-226ENST00000575461 COX17Q14061 63 aa1.78□□□□□ -2.12
CALCOCO2-226ENST00000575461 BAGE2Q86Y30 109 aa1.78□□□□□ -2.12
CALCOCO2-226ENST00000575461 HYDINQ4G0P3 5121 aa1.78□□□□□ -2.12
CALCOCO2-226ENST00000575461 FLNAP21333 2647 aaKnown RBP1.78□□□□□ -2.12
CALCOCO2-226ENST00000575461 ACACBO00763 2458 aa1.78□□□□□ -2.12
CALCOCO2-226ENST00000575461 TET3O43151 1660 aa1.77□□□□□ -2.13
CALCOCO2-226ENST00000575461 TEX15Q9BXT5 2789 aa1.77□□□□□ -2.13
CALCOCO2-226ENST00000575461 IGLC7A0M8Q6 106 aa1.77□□□□□ -2.13
CALCOCO2-226ENST00000575461 TMEM170BQ5T4T1 132 aa1.77□□□□□ -2.13
CALCOCO2-226ENST00000575461 FAM213BQ8TBF2 198 aa1.77□□□□□ -2.13
CALCOCO2-226ENST00000575461 UBR5O95071 2799 aaPredicted RBP1.77□□□□□ -2.13
CALCOCO2-226ENST00000575461 NCOR2Q9Y618 2525 aa1.77□□□□□ -2.13
CALCOCO2-226ENST00000575461 MYOM1P52179 1685 aa1.77□□□□□ -2.13
CALCOCO2-226ENST00000575461 GPR98Q8WXG9 6306 aa1.77□□□□□ -2.13
CALCOCO2-226ENST00000575461 CLASP1Q7Z460 1538 aa1.76□□□□□ -2.13
CALCOCO2-226ENST00000575461 ZNF609O15014 1411 aa1.76□□□□□ -2.13
CALCOCO2-226ENST00000575461 APOC3P02656 99 aa1.76□□□□□ -2.13
CALCOCO2-226ENST00000575461 CDC42SE2Q9NRR3 84 aa1.76□□□□□ -2.13
CALCOCO2-226ENST00000575461 PLAC8Q9NZF1 115 aa1.76□□□□□ -2.13
CALCOCO2-226ENST00000575461 NBEAL1Q6ZS30 2694 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms