RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 CHIC1Q5VXU3 224 aa30.2■■■□□ 2.43
CALCOCO2-226ENST00000575461 AEBP2Q6ZN18 517 aaPredicted RBP29.69■■■□□ 2.34
CALCOCO2-226ENST00000575461 PHF23Q9BUL5 403 aaPredicted RBP26.62■■□□□ 1.85
CALCOCO2-226ENST00000575461 SENP3Q9H4L4 574 aaPredicted RBP25.11■■□□□ 1.61
CALCOCO2-226ENST00000575461 PLPPR3Q6T4P5 718 aa25.07■■□□□ 1.6
CALCOCO2-226ENST00000575461 ADRA2BP18089 450 aa23.32■■□□□ 1.32
CALCOCO2-226ENST00000575461 FOXD1Q16676 465 aa23.1■■□□□ 1.29
CALCOCO2-226ENST00000575461 PPP6R1Q9UPN7 881 aa23.09■■□□□ 1.29
CALCOCO2-226ENST00000575461 KCNA4P22459 653 aa22.95■■□□□ 1.26
CALCOCO2-226ENST00000575461 EHMT2Q96KQ7 1210 aa22.74■■□□□ 1.23
CALCOCO2-226ENST00000575461 PPP4R3CPQ6ZMV5 832 aa22.2■■□□□ 1.14
CALCOCO2-226ENST00000575461 SLC4A1APQ9BWU0 796 aaKnown RBP22.11■■□□□ 1.13
CALCOCO2-226ENST00000575461 PIAS4Q8N2W9 510 aaPredicted RBP22.09■■□□□ 1.13
CALCOCO2-226ENST00000575461 NCBP3Q53F19 620 aaKnown RBP22.02■■□□□ 1.12
CALCOCO2-226ENST00000575461 CSRNP3Q8WYN3 585 aa21.97■■□□□ 1.11
CALCOCO2-226ENST00000575461 NPM3O75607 178 aaKnown RBP21.61■■□□□ 1.05
CALCOCO2-226ENST00000575461 CNKSR2Q8WXI2 1034 aa21.36■■□□□ 1.01
CALCOCO2-226ENST00000575461 SCAF1Q9H7N4 1312 aaKnown RBP21.3■■□□□ 1
CALCOCO2-226ENST00000575461 ZBTB22O15209 634 aa21.1■□□□□ 0.97
CALCOCO2-226ENST00000575461 MSH5O43196 834 aa20.94■□□□□ 0.94
CALCOCO2-226ENST00000575461 DNAJC5BQ9UF47 199 aa20.92■□□□□ 0.94
CALCOCO2-226ENST00000575461 FOXD4L1Q9NU39 408 aa20.86■□□□□ 0.93
CALCOCO2-226ENST00000575461 RNF216Q9NWF9 866 aaPredicted RBP20.66■□□□□ 0.9
CALCOCO2-226ENST00000575461 MAPK8IP2Q13387 824 aaPredicted RBP20.64■□□□□ 0.89
CALCOCO2-226ENST00000575461 HOXD11P31277 338 aaPredicted RBP20.25■□□□□ 0.83
CALCOCO2-226ENST00000575461 DMRT2Q9Y5R5 561 aa20.22■□□□□ 0.83
CALCOCO2-226ENST00000575461 AMER1Q5JTC6 1135 aaPredicted RBP20.15■□□□□ 0.82
CALCOCO2-226ENST00000575461 SLC4A2P04920 1241 aa20.11■□□□□ 0.81
CALCOCO2-226ENST00000575461 ATXN8OSP0DMR3 200 aa20.08■□□□□ 0.81
CALCOCO2-226ENST00000575461 RTN4Q9NQC3 1192 aaKnown RBP20.04■□□□□ 0.8
CALCOCO2-226ENST00000575461 SLC24A1O60721 1099 aa20.03■□□□□ 0.8
CALCOCO2-226ENST00000575461 MYCNP04198 464 aaPredicted RBP20■□□□□ 0.79
CALCOCO2-226ENST00000575461 FKBP8Q14318 412 aa19.8■□□□□ 0.76
CALCOCO2-226ENST00000575461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.35■□□□□ 0.69
CALCOCO2-226ENST00000575461 HNRNPUL2Q1KMD3 747 aaKnown RBP19.35■□□□□ 0.69
CALCOCO2-226ENST00000575461 SAMD1Q6SPF0 538 aaPredicted RBP19.31■□□□□ 0.68
CALCOCO2-226ENST00000575461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.3■□□□□ 0.683e-10■■■□□ 18
CALCOCO2-226ENST00000575461 ATF5Q9Y2D1 282 aaPredicted RBP19.27■□□□□ 0.68
CALCOCO2-226ENST00000575461 DCAF8L1A6NGE4 600 aa19.23■□□□□ 0.67
CALCOCO2-226ENST00000575461 U3KPZ7 1027 aaPredicted RBP19.08■□□□□ 0.64
CALCOCO2-226ENST00000575461 ZNF219Q9P2Y4 722 aaPredicted RBP18.91■□□□□ 0.62
CALCOCO2-226ENST00000575461 APLP2Q06481 763 aa18.9■□□□□ 0.62
CALCOCO2-226ENST00000575461 FBXO3Q9UK99 471 aa18.88■□□□□ 0.61
CALCOCO2-226ENST00000575461 SPDYE4A6NLX3 237 aa18.72■□□□□ 0.59
CALCOCO2-226ENST00000575461 PROM2Q8N271 834 aa18.58■□□□□ 0.56
CALCOCO2-226ENST00000575461 VASPP50552 380 aaPredicted RBP18.52■□□□□ 0.56
CALCOCO2-226ENST00000575461 PLCB2Q00722 1185 aa18.52■□□□□ 0.56
CALCOCO2-226ENST00000575461 MKRN4PQ13434 485 aaPredicted RBP18.52■□□□□ 0.56
CALCOCO2-226ENST00000575461 FBLN2P98095 1184 aa18.51■□□□□ 0.55
CALCOCO2-226ENST00000575461 IFNLR1Q8IU57 520 aaPredicted RBP18.33■□□□□ 0.52
CALCOCO2-226ENST00000575461 TRHP20396 242 aaPredicted RBP18.27■□□□□ 0.52
CALCOCO2-226ENST00000575461 DCAF8L2P0C7V8 631 aa18.25■□□□□ 0.51
CALCOCO2-226ENST00000575461 HAP1P54257 671 aaPredicted RBP18.24■□□□□ 0.51
CALCOCO2-226ENST00000575461 POLA2Q14181 598 aa18.24■□□□□ 0.51
CALCOCO2-226ENST00000575461 SPINK5Q9NQ38 1064 aaPredicted RBP18.17■□□□□ 0.5
CALCOCO2-226ENST00000575461 PKD2Q13563 968 aa18.16■□□□□ 0.5
CALCOCO2-226ENST00000575461 ZBTB12Q9Y330 459 aaPredicted RBP18.14■□□□□ 0.49
CALCOCO2-226ENST00000575461 CAPN15O75808 1086 aa18.09■□□□□ 0.49
CALCOCO2-226ENST00000575461 VSIG10Q8N0Z9 540 aa18.05■□□□□ 0.48
CALCOCO2-226ENST00000575461 BCANQ96GW7 911 aa18.05■□□□□ 0.48
CALCOCO2-226ENST00000575461 RNF39Q9H2S5 420 aa18■□□□□ 0.47
CALCOCO2-226ENST00000575461 SPOCK2Q92563 424 aa17.98■□□□□ 0.47
CALCOCO2-226ENST00000575461 KLHL34Q8N239 644 aa17.95■□□□□ 0.46
CALCOCO2-226ENST00000575461 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.93■□□□□ 0.46
CALCOCO2-226ENST00000575461 BBXQ8WY36 941 aaPredicted RBP17.92■□□□□ 0.46
CALCOCO2-226ENST00000575461 C1QBPQ07021 282 aaKnown RBP17.9■□□□□ 0.46
CALCOCO2-226ENST00000575461 STAG3Q9UJ98 1225 aa17.9■□□□□ 0.46
CALCOCO2-226ENST00000575461 ECM2O94769 699 aaPredicted RBP17.87■□□□□ 0.45
CALCOCO2-226ENST00000575461 ABCB7O75027 752 aa17.8■□□□□ 0.44
CALCOCO2-226ENST00000575461 ZNF692Q9BU19 519 aaPredicted RBP17.78■□□□□ 0.44
CALCOCO2-226ENST00000575461 TAOK2Q9UL54 1235 aa17.75■□□□□ 0.43
CALCOCO2-226ENST00000575461 PLCD3Q8N3E9 789 aa17.73■□□□□ 0.43
CALCOCO2-226ENST00000575461 PAXIP1Q6ZW49 1069 aaPredicted RBP17.72■□□□□ 0.43
CALCOCO2-226ENST00000575461 SPDYE2BA6NHP3 402 aa17.7■□□□□ 0.42
CALCOCO2-226ENST00000575461 NPM1P06748 294 aaKnown RBP eCLIP17.7■□□□□ 0.42
CALCOCO2-226ENST00000575461 SPDYE6P0CI01 402 aa17.7■□□□□ 0.42
CALCOCO2-226ENST00000575461 SPDYE2Q495Y8 402 aa17.7■□□□□ 0.42
CALCOCO2-226ENST00000575461 CFAP44Q96MT7 982 aa17.67■□□□□ 0.42
CALCOCO2-226ENST00000575461 KDM2AQ9Y2K7 1162 aa17.66■□□□□ 0.42
CALCOCO2-226ENST00000575461 SSUH2Q9Y2M2 353 aa17.66■□□□□ 0.42
CALCOCO2-226ENST00000575461 PRKCSHP14314 528 aaPredicted RBP17.65■□□□□ 0.42
CALCOCO2-226ENST00000575461 RGL2O15211 777 aa17.62■□□□□ 0.41
CALCOCO2-226ENST00000575461 MIER1Q8N108 512 aa17.62■□□□□ 0.41
CALCOCO2-226ENST00000575461 SPRYD3Q8NCJ5 442 aa17.6■□□□□ 0.41
CALCOCO2-226ENST00000575461 PABPN1Q86U42 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
CALCOCO2-226ENST00000575461 OSCARQ8IYS5 282 aa17.56■□□□□ 0.4
CALCOCO2-226ENST00000575461 ZBTB47Q9UFB7 747 aaPredicted RBP17.54■□□□□ 0.4
CALCOCO2-226ENST00000575461 PLEKHG5O94827 1062 aa17.53■□□□□ 0.4
CALCOCO2-226ENST00000575461 DSG3P32926 999 aa17.52■□□□□ 0.4
CALCOCO2-226ENST00000575461 CIZ1Q9ULV3 898 aaPredicted RBP17.47■□□□□ 0.39
CALCOCO2-226ENST00000575461 TPRNQ4KMQ1 711 aa17.46■□□□□ 0.39
CALCOCO2-226ENST00000575461 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
CALCOCO2-226ENST00000575461 CHGAP10645 457 aaKnown RBP17.43■□□□□ 0.38
CALCOCO2-226ENST00000575461 TSHZ2Q9NRE2 1034 aa17.43■□□□□ 0.38
CALCOCO2-226ENST00000575461 HS6ST3Q8IZP7 471 aa17.29■□□□□ 0.36
CALCOCO2-226ENST00000575461 DNAJC5Q9H3Z4 198 aa17.26■□□□□ 0.35
CALCOCO2-226ENST00000575461 GSE1Q14687 1217 aa17.23■□□□□ 0.35
CALCOCO2-226ENST00000575461 NBR1Q14596 966 aa17.2■□□□□ 0.34
CALCOCO2-226ENST00000575461 RNF25Q96BH1 459 aaPredicted RBP17.08■□□□□ 0.32
CALCOCO2-226ENST00000575461 RIOK3O14730 519 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms