RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 IGHV4-31P0DP07 118 aa12.46□□□□□ -0.41
VAC14-210ENST00000568548 DGAT2L7PQ6IED9 249 aa12.46□□□□□ -0.42
VAC14-210ENST00000568548 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.46□□□□□ -0.42
VAC14-210ENST00000568548 GAGE2BQ13066 116 aa12.45□□□□□ -0.42
VAC14-210ENST00000568548 GAGE2EQ4V326 116 aa12.45□□□□□ -0.42
VAC14-210ENST00000568548 GAGE2DQ9UEU5 116 aa12.45□□□□□ -0.42
VAC14-210ENST00000568548 BRI3O95415 125 aa12.45□□□□□ -0.42
VAC14-210ENST00000568548 C3orf56Q8N813 242 aa12.45□□□□□ -0.42
VAC14-210ENST00000568548 CDKN2A-AS1Q9UH64 79 aa12.45□□□□□ -0.42
VAC14-210ENST00000568548 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.44□□□□□ -0.42
VAC14-210ENST00000568548 TRAV8-4A0A0B4J246 113 aa12.44□□□□□ -0.42
VAC14-210ENST00000568548 ICOSQ9Y6W8 199 aa12.44□□□□□ -0.42
VAC14-210ENST00000568548 RPL13AP40429 203 aaKnown RBP12.44□□□□□ -0.42
VAC14-210ENST00000568548 Q96MF0 132 aa12.44□□□□□ -0.42
VAC14-210ENST00000568548 TRGV11A0A075B6L2 103 aa12.43□□□□□ -0.42
VAC14-210ENST00000568548 SBSPONQ8IVN8 264 aa12.43□□□□□ -0.42
VAC14-210ENST00000568548 C15orf53Q8NAA6 179 aa12.43□□□□□ -0.42
VAC14-210ENST00000568548 LITAFQ99732 161 aa12.43□□□□□ -0.42
VAC14-210ENST00000568548 A0A0B4J2C4 111 aa12.43□□□□□ -0.42
VAC14-210ENST00000568548 COX6A2Q02221 97 aa12.43□□□□□ -0.42
VAC14-210ENST00000568548 TRAV13-1A0A0B4J241 112 aa12.42□□□□□ -0.42
VAC14-210ENST00000568548 IGKV3OR2-268A0A0C4DH90 116 aa12.42□□□□□ -0.42
VAC14-210ENST00000568548 TMEM262E9PQX1 116 aa12.42□□□□□ -0.42
VAC14-210ENST00000568548 H3BMM0 161 aa12.42□□□□□ -0.42
VAC14-210ENST00000568548 IGHV1-58A0A0C4DH39 117 aa12.41□□□□□ -0.42
VAC14-210ENST00000568548 LRRC75A-AS1Q8N1F1 130 aa12.41□□□□□ -0.42
VAC14-210ENST00000568548 UBE2WQ96B02 151 aa12.41□□□□□ -0.42
VAC14-210ENST00000568548 CHCHD7Q9BUK0 85 aa12.41□□□□□ -0.42
VAC14-210ENST00000568548 H7C423 109 aa12.4□□□□□ -0.42
VAC14-210ENST00000568548 HIST2H2BCQ6DN03 193 aa12.4□□□□□ -0.42
VAC14-210ENST00000568548 ZNF702PQ9H963 129 aa12.4□□□□□ -0.42
VAC14-210ENST00000568548 FSHBP01225 129 aa12.39□□□□□ -0.43
VAC14-210ENST00000568548 LINC00694P0DN24 101 aa12.39□□□□□ -0.43
VAC14-210ENST00000568548 VSIG2Q96IQ7 327 aa12.39□□□□□ -0.43
VAC14-210ENST00000568548 VPREB3Q9UKI3 123 aa12.39□□□□□ -0.43
VAC14-210ENST00000568548 UBE2D4Q9Y2X8 147 aa12.39□□□□□ -0.43
VAC14-210ENST00000568548 MRPS36P82909 103 aaKnown RBP12.39□□□□□ -0.43
VAC14-210ENST00000568548 CCDC179H3BU77 68 aa12.38□□□□□ -0.43
VAC14-210ENST00000568548 COX6CP09669 75 aa12.38□□□□□ -0.43
VAC14-210ENST00000568548 PLA2G2AP14555 144 aa12.38□□□□□ -0.43
VAC14-210ENST00000568548 Q6YL49 198 aa12.38□□□□□ -0.43
VAC14-210ENST00000568548 TRBV10-2A0A0K0K1G8 114 aa12.38□□□□□ -0.43
VAC14-210ENST00000568548 TRGV1A0A0A0MS02 117 aa12.38□□□□□ -0.43
VAC14-210ENST00000568548 DYNLRB2Q8TF09 96 aa12.38□□□□□ -0.43
VAC14-210ENST00000568548 Q9H8V8 135 aa12.38□□□□□ -0.43
VAC14-210ENST00000568548 KRTAP1-3Q8IUG1 177 aa12.37□□□□□ -0.43
VAC14-210ENST00000568548 ODF3Q96PU9 254 aa12.37□□□□□ -0.43
VAC14-210ENST00000568548 ITPR2Q14571 2701 aa12.36□□□□□ -0.43
VAC14-210ENST00000568548 MIAQ16674 131 aa12.36□□□□□ -0.43
VAC14-210ENST00000568548 NHLRC4P0CG21 123 aaPredicted RBP12.36□□□□□ -0.43
VAC14-210ENST00000568548 MEIG1Q5JSS6 88 aa12.36□□□□□ -0.43
VAC14-210ENST00000568548 TRBV30A0A0K0K1B3 111 aa12.35□□□□□ -0.43
VAC14-210ENST00000568548 NDUFV3P56181 108 aaKnown RBP12.35□□□□□ -0.43
VAC14-210ENST00000568548 TMEM101Q96IK0 257 aa12.35□□□□□ -0.43
VAC14-210ENST00000568548 MAP6D1Q9H9H5 199 aa12.35□□□□□ -0.43
VAC14-210ENST00000568548 CITED1Q99966 193 aa12.34□□□□□ -0.43
VAC14-210ENST00000568548 ZNF415Q09FC8 603 aa12.33□□□□□ -0.44
VAC14-210ENST00000568548 WFDC11Q8NEX6 87 aa12.33□□□□□ -0.44
VAC14-210ENST00000568548 Q8N2B8 174 aa12.33□□□□□ -0.44
VAC14-210ENST00000568548 WFDC10AQ9H1F0 79 aa12.33□□□□□ -0.44
VAC14-210ENST00000568548 KMT2BQ9UMN6 2715 aaPredicted RBP12.32□□□□□ -0.44
VAC14-210ENST00000568548 HELZ2Q9BYK8 2649 aaKnown RBP12.32□□□□□ -0.44
VAC14-210ENST00000568548 GAGE12JA6NER3 117 aa12.32□□□□□ -0.44
VAC14-210ENST00000568548 GAGE4Q13068 117 aa12.32□□□□□ -0.44
VAC14-210ENST00000568548 GAGE5Q13069 117 aa12.32□□□□□ -0.44
VAC14-210ENST00000568548 GAGE6Q13070 117 aa12.32□□□□□ -0.44
VAC14-210ENST00000568548 Q6ZTI0 123 aa12.32□□□□□ -0.44
VAC14-210ENST00000568548 PYGO1Q9Y3Y4 419 aa12.32□□□□□ -0.44
VAC14-210ENST00000568548 TINCRA0A1B0GVN0 87 aa12.31□□□□□ -0.44
VAC14-210ENST00000568548 IFITM1P13164 125 aa12.31□□□□□ -0.44
VAC14-210ENST00000568548 TOMM7Q9P0U1 55 aa12.31□□□□□ -0.44
VAC14-210ENST00000568548 VWFP04275 2813 aa12.31□□□□□ -0.44
VAC14-210ENST00000568548 TMEM89A2RUT3 159 aa12.31□□□□□ -0.44
VAC14-210ENST00000568548 PIK3CD-AS1Q5SR53 167 aa12.31□□□□□ -0.44
VAC14-210ENST00000568548 C11orf72Q8NBR9 251 aa12.31□□□□□ -0.44
VAC14-210ENST00000568548 PRIMA1Q86XR5 153 aa12.31□□□□□ -0.44
VAC14-210ENST00000568548 CHCHD5Q9BSY4 110 aa12.31□□□□□ -0.44
VAC14-210ENST00000568548 CITED2Q99967 270 aaPredicted RBP12.3□□□□□ -0.44
VAC14-210ENST00000568548 LOC100131303A0A0U1RQF7 123 aa12.29□□□□□ -0.44
VAC14-210ENST00000568548 RS1O15537 224 aa12.29□□□□□ -0.44
VAC14-210ENST00000568548 J3QKU1 62 aa12.28□□□□□ -0.44
VAC14-210ENST00000568548 SOSTDC1Q6X4U4 206 aa12.28□□□□□ -0.44
VAC14-210ENST00000568548 SPANXA1Q9NS26 97 aa12.28□□□□□ -0.44
VAC14-210ENST00000568548 CIRBPQ14011 172 aaKnown RBP12.28□□□□□ -0.44
VAC14-210ENST00000568548 LINC00242Q5T6M2 205 aa12.28□□□□□ -0.44
VAC14-210ENST00000568548 SPANXDQ9BXN6 97 aa12.27□□□□□ -0.44
VAC14-210ENST00000568548 SPANXCQ9NY87 97 aa12.27□□□□□ -0.44
VAC14-210ENST00000568548 DEFB114Q30KQ6 69 aa12.27□□□□□ -0.45
VAC14-210ENST00000568548 LINC00308Q8TCZ7 52 aa12.27□□□□□ -0.45
VAC14-210ENST00000568548 Q9HAA7 133 aa12.27□□□□□ -0.45
VAC14-210ENST00000568548 NOP10Q9NPE3 64 aaKnown RBP12.27□□□□□ -0.45
VAC14-210ENST00000568548 PDZD2O15018 2839 aa12.27□□□□□ -0.45
VAC14-210ENST00000568548 LST1O00453 97 aa12.27□□□□□ -0.45
VAC14-210ENST00000568548 NTM-AS1Q6ZSK4 140 aa12.27□□□□□ -0.45
VAC14-210ENST00000568548 ODF3L2Q3SX64 289 aa12.26□□□□□ -0.45
VAC14-210ENST00000568548 C11orf68Q9H3H3 251 aaKnown RBP12.26□□□□□ -0.45
VAC14-210ENST00000568548 GAGE7O76087 117 aa12.26□□□□□ -0.45
VAC14-210ENST00000568548 INSP01308 110 aa12.26□□□□□ -0.45
VAC14-210ENST00000568548 GAGE12FP0CL80 117 aa12.26□□□□□ -0.45
VAC14-210ENST00000568548 GAGE12GP0CL81 117 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms