RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 MRPS12O15235 138 aaKnown RBP3.23□□□□□ -1.89
LPCAT2-208ENST00000566915 TSHBP01222 138 aa3.23□□□□□ -1.89
LPCAT2-208ENST00000566915 RNASE3P12724 160 aaKnown RBP3.23□□□□□ -1.89
LPCAT2-208ENST00000566915 UBE2D3P61077 147 aa3.23□□□□□ -1.89
LPCAT2-208ENST00000566915 UBE2D2P62837 147 aa3.23□□□□□ -1.89
LPCAT2-208ENST00000566915 DEFB136Q30KP8 78 aa3.23□□□□□ -1.89
LPCAT2-208ENST00000566915 C11orf71Q6IPW1 123 aa3.23□□□□□ -1.89
LPCAT2-208ENST00000566915 TRBV6-8A0A0A6YYG3 113 aa3.23□□□□□ -1.89
LPCAT2-208ENST00000566915 IGIPA6NJ69 53 aa3.23□□□□□ -1.89
LPCAT2-208ENST00000566915 NOTCH3Q9UM47 2321 aa3.23□□□□□ -1.89
LPCAT2-208ENST00000566915 ANKHD1Q8IWZ3 2542 aaKnown RBP3.23□□□□□ -1.89
LPCAT2-208ENST00000566915 NCOR2Q9Y618 2525 aa3.23□□□□□ -1.89
LPCAT2-208ENST00000566915 PTPRQQ9UMZ3 2332 aa3.23□□□□□ -1.89
LPCAT2-208ENST00000566915 MAPK1IP1LQ8NDC0 245 aa3.23□□□□□ -1.89
LPCAT2-208ENST00000566915 REG3AQ06141 175 aa3.23□□□□□ -1.89
LPCAT2-208ENST00000566915 KIR2DL5BQ8NHK3 375 aa3.23□□□□□ -1.89
LPCAT2-208ENST00000566915 NRGNQ92686 78 aa3.23□□□□□ -1.89
LPCAT2-208ENST00000566915 C20orf173Q96LM9 149 aa3.23□□□□□ -1.89
LPCAT2-208ENST00000566915 CSDC2Q9Y534 153 aaKnown RBP3.23□□□□□ -1.89
LPCAT2-208ENST00000566915 A0A096LPF7 62 aa3.22□□□□□ -1.89
LPCAT2-208ENST00000566915 USP17L23D6RBM5 183 aa3.22□□□□□ -1.89
LPCAT2-208ENST00000566915 NCR3O14931 201 aa3.22□□□□□ -1.89
LPCAT2-208ENST00000566915 C20orf197Q8N268 126 aa3.22□□□□□ -1.89
LPCAT2-208ENST00000566915 SVIPQ8NHG7 77 aa3.22□□□□□ -1.89
LPCAT2-208ENST00000566915 Q9HAA7 133 aa3.22□□□□□ -1.89
LPCAT2-208ENST00000566915 PTPRBP23467 1997 aa3.22□□□□□ -1.89
LPCAT2-208ENST00000566915 HCFC1P51610 2035 aa3.22□□□□□ -1.89
LPCAT2-208ENST00000566915 MIFP14174 115 aa3.22□□□□□ -1.89
LPCAT2-208ENST00000566915 CD164L2Q6UWJ8 174 aa3.22□□□□□ -1.89
LPCAT2-208ENST00000566915 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.22□□□□□ -1.89
LPCAT2-208ENST00000566915 DEFB105AQ8NG35 78 aa3.22□□□□□ -1.89
LPCAT2-208ENST00000566915 URB1-AS1Q96HZ7 61 aa3.22□□□□□ -1.89
LPCAT2-208ENST00000566915 UBE2D4Q9Y2X8 147 aa3.22□□□□□ -1.89
LPCAT2-208ENST00000566915 PCNX3Q9H6A9 2034 aa3.22□□□□□ -1.89
LPCAT2-208ENST00000566915 CHKB-CPT1BH3BT56 60 aa3.22□□□□□ -1.89
LPCAT2-208ENST00000566915 IGLV1-40P01703 118 aa3.22□□□□□ -1.89
LPCAT2-208ENST00000566915 CRYGDP07320 174 aa3.22□□□□□ -1.89
LPCAT2-208ENST00000566915 ARHGAP21Q5T5U3 1957 aa3.22□□□□□ -1.89
LPCAT2-208ENST00000566915 Q8IZM0 81 aa3.22□□□□□ -1.89
LPCAT2-208ENST00000566915 CHCHD7Q9BUK0 85 aa3.22□□□□□ -1.89
LPCAT2-208ENST00000566915 DHRS4-AS1Q9P1J3 65 aa3.22□□□□□ -1.89
LPCAT2-208ENST00000566915 TANC2Q9HCD6 1990 aa3.22□□□□□ -1.89
LPCAT2-208ENST00000566915 TRAV23DV6A0A075B6W5 121 aa3.21□□□□□ -1.89
LPCAT2-208ENST00000566915 LINC01546A6NGU7 62 aa3.21□□□□□ -1.89
LPCAT2-208ENST00000566915 F8WDY8 70 aa3.21□□□□□ -1.89
LPCAT2-208ENST00000566915 RPL28P46779 137 aaKnown RBP3.21□□□□□ -1.89
LPCAT2-208ENST00000566915 XGP55808 180 aa3.21□□□□□ -1.89
LPCAT2-208ENST00000566915 MRPL55Q7Z7F7 128 aaKnown RBP3.21□□□□□ -1.89
LPCAT2-208ENST00000566915 LINC01561Q8N1V8 128 aa3.21□□□□□ -1.89
LPCAT2-208ENST00000566915 CHCHD10Q8WYQ3 142 aaPredicted RBP3.21□□□□□ -1.89
LPCAT2-208ENST00000566915 B9D2Q9BPU9 175 aa3.21□□□□□ -1.89
LPCAT2-208ENST00000566915 KLK12Q9UKR0 248 aa3.21□□□□□ -1.89
LPCAT2-208ENST00000566915 IGLV10-54A0A075B6I4 117 aa3.21□□□□□ -1.9
LPCAT2-208ENST00000566915 NDUFS5O43920 106 aa3.21□□□□□ -1.9
LPCAT2-208ENST00000566915 Q6ZTI0 123 aa3.21□□□□□ -1.9
LPCAT2-208ENST00000566915 LINC00526Q96FQ7 95 aa3.21□□□□□ -1.9
LPCAT2-208ENST00000566915 BDP1A6H8Y1 2624 aa3.21□□□□□ -1.9
LPCAT2-208ENST00000566915 NBASA2RRP1 2371 aa3.21□□□□□ -1.9
LPCAT2-208ENST00000566915 HILS1P60008 231 aa3.21□□□□□ -1.9
LPCAT2-208ENST00000566915 SDIM1Q6ZPB5 146 aa3.21□□□□□ -1.9
LPCAT2-208ENST00000566915 KRTAP3-3Q9BYR6 98 aa3.21□□□□□ -1.9
LPCAT2-208ENST00000566915 KRTAP3-2Q9BYR7 98 aa3.21□□□□□ -1.9
LPCAT2-208ENST00000566915 SMIM26A0A096LP01 95 aa3.21□□□□□ -1.9
LPCAT2-208ENST00000566915 UBE2AP49459 152 aa3.21□□□□□ -1.9
LPCAT2-208ENST00000566915 CEMP1Q6PRD7 247 aaPredicted RBP3.21□□□□□ -1.9
LPCAT2-208ENST00000566915 FAM19A3Q7Z5A8 133 aa3.21□□□□□ -1.9
LPCAT2-208ENST00000566915 SPATA3Q8NHX4 192 aa3.21□□□□□ -1.9
LPCAT2-208ENST00000566915 FAM110AQ9BQ89 295 aa3.21□□□□□ -1.9
LPCAT2-208ENST00000566915 M0R378 163 aa3.2□□□□□ -1.9
LPCAT2-208ENST00000566915 BCE1O60756 84 aa3.2□□□□□ -1.9
LPCAT2-208ENST00000566915 DCANP1Q8TF63 244 aa3.2□□□□□ -1.9
LPCAT2-208ENST00000566915 C11orf21Q9P2W6 132 aa3.2□□□□□ -1.9
LPCAT2-208ENST00000566915 TRAV7A0A075B6U4 112 aa3.2□□□□□ -1.9
LPCAT2-208ENST00000566915 KIAA1549Q9HCM3 1950 aa3.2□□□□□ -1.9
LPCAT2-208ENST00000566915 TRBV10-3A0A0K0K1G6 114 aa3.2□□□□□ -1.9
LPCAT2-208ENST00000566915 LINC01548A6NM66 108 aa3.2□□□□□ -1.9
LPCAT2-208ENST00000566915 CCKP06307 115 aa3.2□□□□□ -1.9
LPCAT2-208ENST00000566915 ENHOQ6UWT2 76 aa3.2□□□□□ -1.9
LPCAT2-208ENST00000566915 LINC00269Q8N2A0 174 aa3.2□□□□□ -1.9
LPCAT2-208ENST00000566915 AMELXQ99217 191 aa3.2□□□□□ -1.9
LPCAT2-208ENST00000566915 MED13LQ71F56 2210 aa3.2□□□□□ -1.9
LPCAT2-208ENST00000566915 DNAJC9-AS1A6NH13 148 aa3.19□□□□□ -1.9
LPCAT2-208ENST00000566915 DEFB1P60022 68 aa3.19□□□□□ -1.9
LPCAT2-208ENST00000566915 C6orf99Q4VX62 202 aa3.19□□□□□ -1.9
LPCAT2-208ENST00000566915 BRK1Q8WUW1 75 aa3.19□□□□□ -1.9
LPCAT2-208ENST00000566915 CDC42SE2Q9NRR3 84 aa3.19□□□□□ -1.9
LPCAT2-208ENST00000566915 BRCA2P51587 3418 aa3.19□□□□□ -1.9
LPCAT2-208ENST00000566915 IGLV2-18A0A075B6J9 118 aa3.19□□□□□ -1.9
LPCAT2-208ENST00000566915 KLK5Q9Y337 293 aaPredicted RBP3.19□□□□□ -1.9
LPCAT2-208ENST00000566915 SERP1Q9Y6X1 66 aa3.19□□□□□ -1.9
LPCAT2-208ENST00000566915 SEC61GP60059 68 aa3.19□□□□□ -1.9
LPCAT2-208ENST00000566915 LELP1Q5T871 98 aa3.19□□□□□ -1.9
LPCAT2-208ENST00000566915 IGLV4-69A0A075B6H9 119 aa3.19□□□□□ -1.9
LPCAT2-208ENST00000566915 LINC00959A0A1B0GUT2 108 aa3.18□□□□□ -1.9
LPCAT2-208ENST00000566915 F8W735 103 aaPredicted RBP3.18□□□□□ -1.9
LPCAT2-208ENST00000566915 DEFB135Q30KP9 77 aa3.18□□□□□ -1.9
LPCAT2-208ENST00000566915 PRR15LQ9BU68 103 aa3.18□□□□□ -1.9
LPCAT2-208ENST00000566915 A0A096LNJ9 63 aa3.18□□□□□ -1.9
LPCAT2-208ENST00000566915 IGHV4-28A0A0C4DH34 117 aa3.18□□□□□ -1.9
LPCAT2-208ENST00000566915 TRBV7-7A0A0K0K1E9 115 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms