RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 GEMIN7Q9H840 131 aaKnown RBP15.21■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 CSDC2Q9Y534 153 aaKnown RBP15.21■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 TRGV4A0A0C4DH28 118 aa15.2■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 UBE2D1P51668 147 aa15.2■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 GTSF1LQ9H1H1 148 aa15.2■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 IGHV1-58A0A0C4DH39 117 aa15.19■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 TIRAPP58753 221 aa15.19■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 IGHV3-64A0A075B6Q5 118 aa15.19■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 IGHV3-30-3P0DP02 117 aa15.19■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 SMIM9A6NGZ8 99 aa15.18■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 SETD2Q9BYW2 2564 aaPredicted RBP15.17■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 IGHV3-30P01768 117 aa15.17■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 IGHV3-30-5P0DP03 117 aa15.17■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 SBSPONQ8IVN8 264 aa15.17■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 KIR2DL5BQ8NHK3 375 aa15.17■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 NOTCH2Q04721 2471 aa15.16■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 NTM-AS1Q6ZSK4 140 aa15.16■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 CITED1Q99966 193 aa15.16■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 SETXQ7Z333 2677 aaKnown RBP15.16■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 TMEM238C9JI98 176 aa15.16■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 TMEM243Q9BU79 118 aa15.16■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 IGLV5-45A0A087WSX0 123 aa15.15■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 H7C423 109 aa15.15■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.15■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 VSIG2Q96IQ7 327 aa15.15■□□□□ 0.02
VPS9D1-AS1-202ENST00000562866 UBE2L6O14933 153 aa15.14■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 FHL2Q14192 279 aa15.14■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 HERVK_113P63121 156 aa15.13■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 FAM19A3Q7Z5A8 133 aa15.13■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 LINC00612Q8N6U2 182 aa15.13■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 LINC00694P0DN24 101 aa15.13■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 TMEM101Q96IK0 257 aa15.13■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 TRAV8-3A0A0A6YYJ7 113 aa15.12■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 A0A0J9YXY3 114 aa15.12■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 OTOGQ6ZRI0 2925 aa15.12■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 C10orf126Q8N4M7 172 aa15.11■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 SPINK8P0C7L1 97 aa15.11■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 PGPEP1Q9NXJ5 209 aa15.11■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 NDUFA12Q9UI09 145 aa15.11■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 APOC4P55056 127 aa15.1■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 RPL24P83731 157 aaKnown RBP15.1■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 CDC42SE2Q9NRR3 84 aa15.1■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 CDKN2A-AS1Q9UH64 79 aa15.1■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 X6R8D5 127 aa15.1■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 LOC100131303A0A0U1RQF7 123 aa15.09■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 SPATA3Q8NHX4 192 aa15.09■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 APOMO95445 188 aa15.08■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 LINC00242Q5T6M2 205 aa15.08■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 ZFAND6Q6FIF0 208 aa15.08■□□□□ 0.01
VPS9D1-AS1-202ENST00000562866 DEFB130BP0DP73 79 aa15.08■□□□□ 0
VPS9D1-AS1-202ENST00000562866 DEFB130AP0DP74 79 aa15.08■□□□□ 0
VPS9D1-AS1-202ENST00000562866 LYRM7Q5U5X0 104 aa15.06■□□□□ 0
VPS9D1-AS1-202ENST00000562866 CFC1BP0CG36 223 aa15.06■□□□□ 0
VPS9D1-AS1-202ENST00000562866 CFC1P0CG37 223 aa15.06■□□□□ 0
VPS9D1-AS1-202ENST00000562866 OCIAD2Q56VL3 154 aa15.06■□□□□ 0
VPS9D1-AS1-202ENST00000562866 LYRM9A8MSI8 78 aa15.05■□□□□ -0
VPS9D1-AS1-202ENST00000562866 COX6A2Q02221 97 aa15.05■□□□□ -0
VPS9D1-AS1-202ENST00000562866 WFDC9Q8NEX5 89 aa15.05■□□□□ -0
VPS9D1-AS1-202ENST00000562866 JMJD1CQ15652 2540 aa15.05■□□□□ -0
VPS9D1-AS1-202ENST00000562866 TRBV6-8A0A0A6YYG3 113 aa15.04■□□□□ -0
VPS9D1-AS1-202ENST00000562866 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.04■□□□□ -0
VPS9D1-AS1-202ENST00000562866 TRAV13-1A0A0B4J241 112 aa15.04■□□□□ -0
VPS9D1-AS1-202ENST00000562866 TIMM17BO60830 172 aa15.04■□□□□ -0
VPS9D1-AS1-202ENST00000562866 TSPAN13O95857 204 aa15.04■□□□□ -0
VPS9D1-AS1-202ENST00000562866 MUSTN1Q8IVN3 82 aa15.04■□□□□ -0
VPS9D1-AS1-202ENST00000562866 SPANXDQ9BXN6 97 aa15.04■□□□□ -0
VPS9D1-AS1-202ENST00000562866 SPANXCQ9NY87 97 aa15.04■□□□□ -0
VPS9D1-AS1-202ENST00000562866 PRO1854Q9UHT4 67 aa15.04■□□□□ -0
VPS9D1-AS1-202ENST00000562866 IGLV5-39A0A0G2JS06 123 aa15.03■□□□□ -0
VPS9D1-AS1-202ENST00000562866 A4D1N5 150 aa15.03■□□□□ -0
VPS9D1-AS1-202ENST00000562866 CYSRT1A8MQ03 144 aa15.03■□□□□ -0
VPS9D1-AS1-202ENST00000562866 NDUFA1O15239 70 aa15.03■□□□□ -0
VPS9D1-AS1-202ENST00000562866 LITAFQ99732 161 aa15.03■□□□□ -0
VPS9D1-AS1-202ENST00000562866 NSD1Q96L73 2696 aaPredicted RBP15.03■□□□□ -0
VPS9D1-AS1-202ENST00000562866 C2CD3Q4AC94 2353 aa15.02■□□□□ -0
VPS9D1-AS1-202ENST00000562866 A0A0B4J2C4 111 aa15.02□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 FN1P02751 2386 aaKnown RBP15.02□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 K7ERU9 68 aa15.01□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 WIPF1O43516 503 aa15.01□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 NIPBLQ6KC79 2804 aaeCLIP15.01□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 A8MZ25 164 aa15.01□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 F8W1H4 67 aa15.01□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 GAGE6Q13070 117 aa15.01□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 PRO0255Q9UI72 69 aa15.01□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 CHCHD5Q9BSY4 110 aa15□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 GYPEP15421 78 aa14.99□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 MIAQ16674 131 aa14.99□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 DEFB135Q30KP9 77 aa14.99□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 FAM222AQ5U5X8 452 aa14.99□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 ATP6V0E2Q8NHE4 81 aa14.99□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 SMIM1B2RUZ4 78 aa14.98□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 CIRBPQ14011 172 aaKnown RBP14.98□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 LOC107984156A0A0G2JMH3 177 aa14.98□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 H3BMG7 143 aa14.98□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 PRSS2P07478 247 aa14.98□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 ARL17AQ8IVW1 177 aa14.98□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 IFITM1P13164 125 aa14.97□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 RNF183Q96D59 192 aa14.96□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 CBY1Q9Y3M2 126 aa14.96□□□□□ -0.01
VPS9D1-AS1-202ENST00000562866 F5H768 121 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms