RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 FOXA3P55318 350 aaPredicted RBP6.47□□□□□ -1.37
SPG11-214ENST00000558989 FAM231DQ6ZW35 169 aa6.47□□□□□ -1.37
SPG11-214ENST00000558989 GTSF1Q8WW33 167 aa6.47□□□□□ -1.37
SPG11-214ENST00000558989 KLK12Q9UKR0 248 aa6.47□□□□□ -1.37
SPG11-214ENST00000558989 DNAH5Q8TE73 4624 aa6.47□□□□□ -1.37
SPG11-214ENST00000558989 A0A087WWC5 75 aa6.46□□□□□ -1.37
SPG11-214ENST00000558989 TRAV26-2A0A0B4J265 109 aa6.46□□□□□ -1.37
SPG11-214ENST00000558989 LINC01551Q86U37 167 aa6.46□□□□□ -1.37
SPG11-214ENST00000558989 DPH3P1Q9H4G8 78 aa6.46□□□□□ -1.37
SPG11-214ENST00000558989 HERC2O95714 4834 aa6.46□□□□□ -1.38
SPG11-214ENST00000558989 A0A087WTM6 91 aa6.46□□□□□ -1.38
SPG11-214ENST00000558989 A0A087WX48 190 aa6.46□□□□□ -1.38
SPG11-214ENST00000558989 LECT2O14960 151 aa6.46□□□□□ -1.38
SPG11-214ENST00000558989 CTRLP40313 264 aa6.46□□□□□ -1.38
SPG11-214ENST00000558989 GAGE6Q13070 117 aa6.46□□□□□ -1.38
SPG11-214ENST00000558989 ADIRFQ15847 76 aa6.46□□□□□ -1.38
SPG11-214ENST00000558989 OR10G8Q8NGN5 311 aa6.46□□□□□ -1.38
SPG11-214ENST00000558989 FAM218AQ96MZ4 157 aa6.46□□□□□ -1.38
SPG11-214ENST00000558989 SIGMAR1Q99720 223 aa6.46□□□□□ -1.38
SPG11-214ENST00000558989 CHCHD5Q9BSY4 110 aa6.46□□□□□ -1.38
SPG11-214ENST00000558989 A8MWL6 223 aa6.45□□□□□ -1.38
SPG11-214ENST00000558989 M0QY20 66 aa6.45□□□□□ -1.38
SPG11-214ENST00000558989 UBE2WQ96B02 151 aa6.45□□□□□ -1.38
SPG11-214ENST00000558989 LRP1BQ9NZR2 4599 aa6.44□□□□□ -1.38
SPG11-214ENST00000558989 TRBV6-8A0A0A6YYG3 113 aa6.44□□□□□ -1.38
SPG11-214ENST00000558989 K7EP13 123 aa6.44□□□□□ -1.38
SPG11-214ENST00000558989 PEA15Q15121 130 aa6.44□□□□□ -1.38
SPG11-214ENST00000558989 TMEM241Q24JQ0 296 aa6.44□□□□□ -1.38
SPG11-214ENST00000558989 RASL11AQ6T310 242 aa6.44□□□□□ -1.38
SPG11-214ENST00000558989 NTM-AS1Q6ZSK4 140 aa6.44□□□□□ -1.38
SPG11-214ENST00000558989 SMIM20Q8N5G0 67 aa6.44□□□□□ -1.38
SPG11-214ENST00000558989 RYR1P21817 5038 aa6.43□□□□□ -1.38
SPG11-214ENST00000558989 IGKV2D-24A0A075B6R9 120 aa6.43□□□□□ -1.38
SPG11-214ENST00000558989 H7C1H1 209 aa6.43□□□□□ -1.38
SPG11-214ENST00000558989 RPL23P62829 140 aaKnown RBP6.43□□□□□ -1.38
SPG11-214ENST00000558989 IFITM2Q01629 132 aa6.43□□□□□ -1.38
SPG11-214ENST00000558989 MPV17L2Q567V2 206 aa6.43□□□□□ -1.38
SPG11-214ENST00000558989 LCE2CQ5TA81 110 aa6.43□□□□□ -1.38
SPG11-214ENST00000558989 CLPSL2Q6UWE3 100 aa6.43□□□□□ -1.38
SPG11-214ENST00000558989 Q8N976 141 aa6.43□□□□□ -1.38
SPG11-214ENST00000558989 BORCS7Q96B45 105 aa6.43□□□□□ -1.38
SPG11-214ENST00000558989 SPANXA1Q9NS26 97 aa6.43□□□□□ -1.38
SPG11-214ENST00000558989 HIGD1CA8MV81 97 aa6.43□□□□□ -1.38
SPG11-214ENST00000558989 ANGP03950 147 aaKnown RBP6.43□□□□□ -1.38
SPG11-214ENST00000558989 COMMD7Q86VX2 200 aa6.43□□□□□ -1.38
SPG11-214ENST00000558989 RPL39LQ96EH5 51 aaKnown RBP6.43□□□□□ -1.38
SPG11-214ENST00000558989 IGLV5-45A0A087WSX0 123 aa6.42□□□□□ -1.38
SPG11-214ENST00000558989 WFDC2Q14508 124 aa6.42□□□□□ -1.38
SPG11-214ENST00000558989 C1orf195Q5TG92 126 aa6.42□□□□□ -1.38
SPG11-214ENST00000558989 TSKUQ8WUA8 353 aa6.42□□□□□ -1.38
SPG11-214ENST00000558989 OSTCQ9NRP0 149 aa6.42□□□□□ -1.38
SPG11-214ENST00000558989 NAT8Q9UHE5 227 aa6.42□□□□□ -1.38
SPG11-214ENST00000558989 TRBV25-1A0A075B6N4 114 aa6.41□□□□□ -1.38
SPG11-214ENST00000558989 TRAV8-3A0A0A6YYJ7 113 aa6.41□□□□□ -1.38
SPG11-214ENST00000558989 CNFNQ9BYD5 112 aa6.41□□□□□ -1.38
SPG11-214ENST00000558989 NIT2Q9NQR4 276 aa6.41□□□□□ -1.38
SPG11-214ENST00000558989 V9GYV3 84 aa6.41□□□□□ -1.38
SPG11-214ENST00000558989 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.41□□□□□ -1.38
SPG11-214ENST00000558989 LRCOL1A6NCL2 159 aa6.41□□□□□ -1.38
SPG11-214ENST00000558989 GAS8-AS1O95177 125 aa6.41□□□□□ -1.38
SPG11-214ENST00000558989 CRPP02741 224 aa6.41□□□□□ -1.38
SPG11-214ENST00000558989 Q6ZVH6 145 aa6.41□□□□□ -1.38
SPG11-214ENST00000558989 C2orf88Q9BSF0 95 aa6.41□□□□□ -1.38
SPG11-214ENST00000558989 IGHV1-24A0A0C4DH33 117 aa6.4□□□□□ -1.38
SPG11-214ENST00000558989 A0A1B0GUT8 65 aa6.4□□□□□ -1.38
SPG11-214ENST00000558989 PFN2P35080 140 aa6.4□□□□□ -1.38
SPG11-214ENST00000558989 RAB5BP61020 215 aa6.4□□□□□ -1.38
SPG11-214ENST00000558989 HAMPP81172 84 aa6.4□□□□□ -1.38
SPG11-214ENST00000558989 FOXI1Q12951 378 aa6.4□□□□□ -1.38
SPG11-214ENST00000558989 CLLU1Q5K131 121 aa6.4□□□□□ -1.38
SPG11-214ENST00000558989 NUP35Q8NFH5 326 aa6.4□□□□□ -1.38
SPG11-214ENST00000558989 IGLV5-52A0A0A0MRZ9 124 aa6.39□□□□□ -1.39
SPG11-214ENST00000558989 ELOBQ15370 118 aa6.39□□□□□ -1.39
SPG11-214ENST00000558989 ENHOQ6UWT2 76 aa6.39□□□□□ -1.39
SPG11-214ENST00000558989 AMN1Q8IY45 258 aa6.39□□□□□ -1.39
SPG11-214ENST00000558989 Q8N814 137 aa6.39□□□□□ -1.39
SPG11-214ENST00000558989 IGKV3OR2-268A0A0C4DH90 116 aa6.39□□□□□ -1.39
SPG11-214ENST00000558989 UBE2L6O14933 153 aa6.39□□□□□ -1.39
SPG11-214ENST00000558989 NCR2O95944 276 aa6.39□□□□□ -1.39
SPG11-214ENST00000558989 HLA-DQA1P01909 254 aa6.39□□□□□ -1.39
SPG11-214ENST00000558989 KRTAP10-1P60331 282 aa6.39□□□□□ -1.39
SPG11-214ENST00000558989 SMAGPQ0VAQ4 97 aa6.39□□□□□ -1.39
SPG11-214ENST00000558989 LINC00269Q8N2A0 174 aa6.39□□□□□ -1.39
SPG11-214ENST00000558989 RMI2Q96E14 147 aa6.39□□□□□ -1.39
SPG11-214ENST00000558989 TMEM243Q9BU79 118 aa6.39□□□□□ -1.39
SPG11-214ENST00000558989 APOBP04114 4563 aaKnown RBP6.38□□□□□ -1.39
SPG11-214ENST00000558989 IGLV10-54A0A075B6I4 117 aa6.38□□□□□ -1.39
SPG11-214ENST00000558989 A0A1B0GV90 55 aa6.38□□□□□ -1.39
SPG11-214ENST00000558989 S100PP25815 95 aa6.38□□□□□ -1.39
SPG11-214ENST00000558989 IQCJQ1A5X6 159 aa6.38□□□□□ -1.39
SPG11-214ENST00000558989 CHCHD7Q9BUK0 85 aa6.38□□□□□ -1.39
SPG11-214ENST00000558989 KRTAP17-1Q9BYP8 105 aa6.38□□□□□ -1.39
SPG11-214ENST00000558989 GFRA4Q9GZZ7 299 aa6.38□□□□□ -1.39
SPG11-214ENST00000558989 NAT8BQ9UHF3 227 aa6.38□□□□□ -1.39
SPG11-214ENST00000558989 IGLV4-60A0A075B6I1 120 aa6.37□□□□□ -1.39
SPG11-214ENST00000558989 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.37□□□□□ -1.39
SPG11-214ENST00000558989 IGKV2-29A2NJV5 120 aaPredicted RBP6.37□□□□□ -1.39
SPG11-214ENST00000558989 SDHAF1A6NFY7 115 aa6.37□□□□□ -1.39
SPG11-214ENST00000558989 MRPL54Q6P161 138 aaKnown RBP6.37□□□□□ -1.39
SPG11-214ENST00000558989 CARHSP1Q9Y2V2 147 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms