RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 ADAMTSL4-AS1Q5T5F5 129 aa11.32□□□□□ -0.6
ARHGEF40-203ENST00000554514 DAND5Q8N907 189 aa11.32□□□□□ -0.6
ARHGEF40-203ENST00000554514 IGHV1-58A0A0C4DH39 117 aa11.32□□□□□ -0.6
ARHGEF40-203ENST00000554514 IGHV3-33P01772 117 aa11.32□□□□□ -0.6
ARHGEF40-203ENST00000554514 C1orf158Q8N1D5 194 aa11.32□□□□□ -0.6
ARHGEF40-203ENST00000554514 LRRC75A-AS1Q8N1F1 130 aa11.32□□□□□ -0.6
ARHGEF40-203ENST00000554514 CITED2Q99967 270 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF40-203ENST00000554514 WFDC10AQ9H1F0 79 aa11.31□□□□□ -0.6
ARHGEF40-203ENST00000554514 SPANXA1Q9NS26 97 aa11.31□□□□□ -0.6
ARHGEF40-203ENST00000554514 RS1O15537 224 aa11.31□□□□□ -0.6
ARHGEF40-203ENST00000554514 NDUFA7O95182 113 aa11.31□□□□□ -0.6
ARHGEF40-203ENST00000554514 CDKN2A-AS1Q9UH64 79 aa11.31□□□□□ -0.6
ARHGEF40-203ENST00000554514 SETXQ7Z333 2677 aaKnown RBP11.31□□□□□ -0.6
ARHGEF40-203ENST00000554514 Q6ZTI0 123 aa11.3□□□□□ -0.6
ARHGEF40-203ENST00000554514 A0A0U1RRA0 63 aa11.3□□□□□ -0.6
ARHGEF40-203ENST00000554514 VSIG2Q96IQ7 327 aa11.3□□□□□ -0.6
ARHGEF40-203ENST00000554514 TINCRA0A1B0GVN0 87 aa11.29□□□□□ -0.6
ARHGEF40-203ENST00000554514 C9JAW5 83 aa11.29□□□□□ -0.6
ARHGEF40-203ENST00000554514 TRBV20-1A0A075B6N2 111 aa11.29□□□□□ -0.6
ARHGEF40-203ENST00000554514 BEAN1Q3B7T3 259 aa11.29□□□□□ -0.6
ARHGEF40-203ENST00000554514 LINC00694P0DN24 101 aa11.29□□□□□ -0.6
ARHGEF40-203ENST00000554514 ZNF625Q96I27 306 aaPredicted RBP11.29□□□□□ -0.6
ARHGEF40-203ENST00000554514 LITAFQ99732 161 aa11.29□□□□□ -0.6
ARHGEF40-203ENST00000554514 RPL35AP18077 110 aaKnown RBP11.28□□□□□ -0.6
ARHGEF40-203ENST00000554514 COX6A2Q02221 97 aa11.28□□□□□ -0.6
ARHGEF40-203ENST00000554514 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.28□□□□□ -0.6
ARHGEF40-203ENST00000554514 NOP10Q9NPE3 64 aaKnown RBP11.28□□□□□ -0.6
ARHGEF40-203ENST00000554514 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.27□□□□□ -0.6
ARHGEF40-203ENST00000554514 TRAV13-1A0A0B4J241 112 aa11.27□□□□□ -0.6
ARHGEF40-203ENST00000554514 GAGE12JA6NER3 117 aa11.27□□□□□ -0.6
ARHGEF40-203ENST00000554514 GAGE4Q13068 117 aa11.27□□□□□ -0.6
ARHGEF40-203ENST00000554514 GAGE5Q13069 117 aa11.27□□□□□ -0.6
ARHGEF40-203ENST00000554514 ANKRD29Q8N6D5 301 aa11.27□□□□□ -0.6
ARHGEF40-203ENST00000554514 DNAJC30Q96LL9 226 aa11.27□□□□□ -0.6
ARHGEF40-203ENST00000554514 CARD19Q96LW7 228 aa11.27□□□□□ -0.6
ARHGEF40-203ENST00000554514 A0A0B4J2C4 111 aa11.27□□□□□ -0.61
ARHGEF40-203ENST00000554514 SPATA25Q9BR10 227 aa11.27□□□□□ -0.61
ARHGEF40-203ENST00000554514 PIK3CD-AS1Q5SR53 167 aa11.26□□□□□ -0.61
ARHGEF40-203ENST00000554514 TENM4Q6N022 2769 aa11.26□□□□□ -0.61
ARHGEF40-203ENST00000554514 TEN1Q86WV5 123 aa11.26□□□□□ -0.61
ARHGEF40-203ENST00000554514 SLC25A20O43772 301 aa11.25□□□□□ -0.61
ARHGEF40-203ENST00000554514 SMIM20Q8N5G0 67 aa11.25□□□□□ -0.61
ARHGEF40-203ENST00000554514 PLA2G2AP14555 144 aa11.25□□□□□ -0.61
ARHGEF40-203ENST00000554514 FHL3Q13643 280 aa11.25□□□□□ -0.61
ARHGEF40-203ENST00000554514 YAE1D1Q9NRH1 226 aa11.25□□□□□ -0.61
ARHGEF40-203ENST00000554514 TRIAP1O43715 76 aa11.24□□□□□ -0.61
ARHGEF40-203ENST00000554514 TMEM86BQ8N661 226 aa11.24□□□□□ -0.61
ARHGEF40-203ENST00000554514 ATP6V0E2Q8NHE4 81 aa11.24□□□□□ -0.61
ARHGEF40-203ENST00000554514 PPDPFLQ8WWR9 84 aa11.24□□□□□ -0.61
ARHGEF40-203ENST00000554514 TMEM101Q96IK0 257 aa11.24□□□□□ -0.61
ARHGEF40-203ENST00000554514 RPL36AP83881 106 aaKnown RBP11.24□□□□□ -0.61
ARHGEF40-203ENST00000554514 RPL36ALQ969Q0 106 aaKnown RBP11.24□□□□□ -0.61
ARHGEF40-203ENST00000554514 K7EQD1 137 aa11.23□□□□□ -0.61
ARHGEF40-203ENST00000554514 GAGE7O76087 117 aa11.23□□□□□ -0.61
ARHGEF40-203ENST00000554514 GAGE12FP0CL80 117 aa11.23□□□□□ -0.61
ARHGEF40-203ENST00000554514 GAGE12GP0CL81 117 aa11.23□□□□□ -0.61
ARHGEF40-203ENST00000554514 GAGE12IP0CL82 117 aa11.23□□□□□ -0.61
ARHGEF40-203ENST00000554514 MIAQ16674 131 aa11.23□□□□□ -0.61
ARHGEF40-203ENST00000554514 FAM110AQ9BQ89 295 aa11.23□□□□□ -0.61
ARHGEF40-203ENST00000554514 TRAV25A0A0B4J276 109 aa11.22□□□□□ -0.61
ARHGEF40-203ENST00000554514 LOC100131303A0A0U1RQF7 123 aa11.22□□□□□ -0.61
ARHGEF40-203ENST00000554514 ZFAND6Q6FIF0 208 aa11.22□□□□□ -0.61
ARHGEF40-203ENST00000554514 NTM-AS1Q6ZSK4 140 aa11.22□□□□□ -0.61
ARHGEF40-203ENST00000554514 TRGV2A0A075B6R0 118 aa11.22□□□□□ -0.61
ARHGEF40-203ENST00000554514 LINC01006Q8NI28 216 aa11.22□□□□□ -0.61
ARHGEF40-203ENST00000554514 CDIP1Q9H305 208 aa11.22□□□□□ -0.61
ARHGEF40-203ENST00000554514 Q9H8V8 135 aa11.22□□□□□ -0.61
ARHGEF40-203ENST00000554514 ITPR2Q14571 2701 aa11.22□□□□□ -0.61
ARHGEF40-203ENST00000554514 IGKV3OR2-268A0A0C4DH90 116 aa11.21□□□□□ -0.61
ARHGEF40-203ENST00000554514 LINC00242Q5T6M2 205 aa11.21□□□□□ -0.61
ARHGEF40-203ENST00000554514 SPANXDQ9BXN6 97 aa11.21□□□□□ -0.62
ARHGEF40-203ENST00000554514 SPANXCQ9NY87 97 aa11.21□□□□□ -0.62
ARHGEF40-203ENST00000554514 ATXN8Q156A1 80 aa11.2□□□□□ -0.62
ARHGEF40-203ENST00000554514 CLEC2BQ92478 149 aa11.2□□□□□ -0.62
ARHGEF40-203ENST00000554514 ICOSQ9Y6W8 199 aa11.2□□□□□ -0.62
ARHGEF40-203ENST00000554514 FN1P02751 2386 aaKnown RBP11.19□□□□□ -0.62
ARHGEF40-203ENST00000554514 IL17DQ8TAD2 202 aa11.19□□□□□ -0.62
ARHGEF40-203ENST00000554514 MT-ATP8P03928 68 aa11.19□□□□□ -0.62
ARHGEF40-203ENST00000554514 RPL13AP40429 203 aaKnown RBP11.19□□□□□ -0.62
ARHGEF40-203ENST00000554514 LINC01620Q4KN68 170 aa11.19□□□□□ -0.62
ARHGEF40-203ENST00000554514 SBSPONQ8IVN8 264 aa11.19□□□□□ -0.62
ARHGEF40-203ENST00000554514 GIG44P09565 113 aaPredicted RBP11.19□□□□□ -0.62
ARHGEF40-203ENST00000554514 NTN5Q8WTR8 489 aaPredicted RBP11.19□□□□□ -0.62
ARHGEF40-203ENST00000554514 UBE2L6O14933 153 aa11.18□□□□□ -0.62
ARHGEF40-203ENST00000554514 TIRAPP58753 221 aa11.18□□□□□ -0.62
ARHGEF40-203ENST00000554514 HERVK_113P63121 156 aa11.18□□□□□ -0.62
ARHGEF40-203ENST00000554514 TRAV4A0A0B4J268 109 aa11.18□□□□□ -0.62
ARHGEF40-203ENST00000554514 NDUFA1O15239 70 aa11.17□□□□□ -0.62
ARHGEF40-203ENST00000554514 XGP55808 180 aa11.17□□□□□ -0.62
ARHGEF40-203ENST00000554514 MEIG1Q5JSS6 88 aa11.17□□□□□ -0.62
ARHGEF40-203ENST00000554514 TRBV30A0A0K0K1B3 111 aa11.16□□□□□ -0.62
ARHGEF40-203ENST00000554514 B5MCH6 92 aa11.16□□□□□ -0.62
ARHGEF40-203ENST00000554514 DAZ2Q13117 558 aaKnown RBP11.16□□□□□ -0.62
ARHGEF40-203ENST00000554514 DAZ4Q86SG3 579 aaKnown RBP11.16□□□□□ -0.62
ARHGEF40-203ENST00000554514 DAZ3Q9NR90 486 aaKnown RBP11.16□□□□□ -0.62
ARHGEF40-203ENST00000554514 CIRBPQ14011 172 aaKnown RBP11.16□□□□□ -0.62
ARHGEF40-203ENST00000554514 RNF183Q96D59 192 aa11.16□□□□□ -0.62
ARHGEF40-203ENST00000554514 IGLV5-45A0A087WSX0 123 aa11.15□□□□□ -0.62
ARHGEF40-203ENST00000554514 SMIM1B2RUZ4 78 aa11.15□□□□□ -0.62
ARHGEF40-203ENST00000554514 PRIMA1Q86XR5 153 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 337.7 ms