RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 MYO7AQ13402 2215 aa2.08□□□□□ -2.08
TDP1-207ENST00000553617 TRAV12-1A0A0B4J245 112 aa2.08□□□□□ -2.08
TDP1-207ENST00000553617 FAM223BA6NKX1 122 aa2.08□□□□□ -2.08
TDP1-207ENST00000553617 KRTAP25-1Q3LHN0 102 aa2.08□□□□□ -2.08
TDP1-207ENST00000553617 PRR9Q5T870 116 aa2.08□□□□□ -2.08
TDP1-207ENST00000553617 NDUFA11Q86Y39 141 aa2.08□□□□□ -2.08
TDP1-207ENST00000553617 R4GN34 69 aa2.08□□□□□ -2.08
TDP1-207ENST00000553617 WIZO95785 1651 aa2.08□□□□□ -2.08
TDP1-207ENST00000553617 MYOM1P52179 1685 aa2.08□□□□□ -2.08
TDP1-207ENST00000553617 PREX1Q8TCU6 1659 aa2.08□□□□□ -2.08
TDP1-207ENST00000553617 IFT172Q9UG01 1749 aa2.08□□□□□ -2.08
TDP1-207ENST00000553617 CRYBG1Q9Y4K1 1723 aa2.08□□□□□ -2.08
TDP1-207ENST00000553617 RP1P56715 2156 aa2.08□□□□□ -2.08
TDP1-207ENST00000553617 KDM6BO15054 1643 aa2.07□□□□□ -2.08
TDP1-207ENST00000553617 SHPRHQ149N8 1683 aa2.07□□□□□ -2.08
TDP1-207ENST00000553617 CEBPZOSA8MTT3 80 aa2.07□□□□□ -2.08
TDP1-207ENST00000553617 ERHP84090 104 aaKnown RBP2.07□□□□□ -2.08
TDP1-207ENST00000553617 ESPL1Q14674 2120 aa2.07□□□□□ -2.08
TDP1-207ENST00000553617 PLGLAQ15195 96 aa2.07□□□□□ -2.08
TDP1-207ENST00000553617 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
TDP1-207ENST00000553617 FAM103A1Q9BTL3 118 aaKnown RBP2.07□□□□□ -2.08
TDP1-207ENST00000553617 PSENENQ9NZ42 101 aa2.07□□□□□ -2.08
TDP1-207ENST00000553617 GNG13Q9P2W3 67 aa2.07□□□□□ -2.08
TDP1-207ENST00000553617 LAMA4Q16363 1823 aa2.07□□□□□ -2.08
TDP1-207ENST00000553617 ADCY10Q96PN6 1610 aa2.06□□□□□ -2.08
TDP1-207ENST00000553617 COL11A1P12107 1806 aaPredicted RBP2.06□□□□□ -2.08
TDP1-207ENST00000553617 IGLV3-32A0A0A0MS00 114 aa2.06□□□□□ -2.08
TDP1-207ENST00000553617 TRBV10-1A0A0K0K1A3 114 aa2.06□□□□□ -2.08
TDP1-207ENST00000553617 H3BVH4 76 aa2.06□□□□□ -2.08
TDP1-207ENST00000553617 SPINT3P49223 89 aa2.06□□□□□ -2.08
TDP1-207ENST00000553617 UBE2D1P51668 147 aa2.06□□□□□ -2.08
TDP1-207ENST00000553617 KRTAP13-3Q3SY46 172 aa2.06□□□□□ -2.08
TDP1-207ENST00000553617 CSAG1Q6PB30 78 aa2.06□□□□□ -2.08
TDP1-207ENST00000553617 KRTAP26-1Q6PEX3 210 aa2.06□□□□□ -2.08
TDP1-207ENST00000553617 ZNF833PQ6ZTB9 187 aa2.06□□□□□ -2.08
TDP1-207ENST00000553617 CDC42SE2Q9NRR3 84 aa2.06□□□□□ -2.08
TDP1-207ENST00000553617 TMEM14BQ9NUH8 114 aa2.06□□□□□ -2.08
TDP1-207ENST00000553617 LHFPL6Q9Y693 200 aa2.06□□□□□ -2.08
TDP1-207ENST00000553617 PI4KAP42356 2102 aa2.06□□□□□ -2.08
TDP1-207ENST00000553617 NESP48681 1621 aa2.06□□□□□ -2.08
TDP1-207ENST00000553617 MROH2AA6NES4 1674 aa2.06□□□□□ -2.08
TDP1-207ENST00000553617 IQGAP1P46940 1657 aa2.06□□□□□ -2.08
TDP1-207ENST00000553617 ARHGAP32A7KAX9 2087 aa2.05□□□□□ -2.08
TDP1-207ENST00000553617 TMSB15BA0A087X1C1 80 aa2.05□□□□□ -2.08
TDP1-207ENST00000553617 A0A1W2PNM2 257 aa2.05□□□□□ -2.08
TDP1-207ENST00000553617 C2orf70A6NJV1 201 aa2.05□□□□□ -2.08
TDP1-207ENST00000553617 RTL8CO15255 209 aa2.05□□□□□ -2.08
TDP1-207ENST00000553617 HRES1P13985 223 aa2.05□□□□□ -2.08
TDP1-207ENST00000553617 Q6JHZ5 121 aa2.05□□□□□ -2.08
TDP1-207ENST00000553617 C9orf163Q8N9P6 203 aa2.05□□□□□ -2.08
TDP1-207ENST00000553617 PROK2Q9HC23 129 aa2.05□□□□□ -2.08
TDP1-207ENST00000553617 LAMB2P55268 1798 aa2.05□□□□□ -2.08
TDP1-207ENST00000553617 GBF1Q92538 1859 aa2.05□□□□□ -2.08
TDP1-207ENST00000553617 TRBV6-8A0A0A6YYG3 113 aa2.04□□□□□ -2.08
TDP1-207ENST00000553617 LOC101927531A0A1B0GV80 90 aa2.04□□□□□ -2.08
TDP1-207ENST00000553617 C10orf142B7Z368 130 aa2.04□□□□□ -2.08
TDP1-207ENST00000553617 HMGN4O00479 90 aa2.04□□□□□ -2.08
TDP1-207ENST00000553617 NFAT5O94916 1531 aa2.04□□□□□ -2.08
TDP1-207ENST00000553617 IGHV3-33P01772 117 aa2.04□□□□□ -2.08
TDP1-207ENST00000553617 IFI27P40305 119 aaPredicted RBP2.04□□□□□ -2.08
TDP1-207ENST00000553617 ELOF1P60002 83 aaKnown RBP2.04□□□□□ -2.08
TDP1-207ENST00000553617 LYPD1Q8N2G4 141 aa2.04□□□□□ -2.08
TDP1-207ENST00000553617 HIGD2AQ9BW72 106 aa2.04□□□□□ -2.08
TDP1-207ENST00000553617 NDUFA4L2Q9NRX3 87 aa2.04□□□□□ -2.08
TDP1-207ENST00000553617 ARFGEF1Q9Y6D6 1849 aa2.04□□□□□ -2.08
TDP1-207ENST00000553617 KIAA0556O60303 1618 aa2.03□□□□□ -2.08
TDP1-207ENST00000553617 TRBV6-7A0A0A0MS04 114 aa2.03□□□□□ -2.08
TDP1-207ENST00000553617 HIGD1CA8MV81 97 aa2.03□□□□□ -2.08
TDP1-207ENST00000553617 PSCAO43653 123 aa2.03□□□□□ -2.08
TDP1-207ENST00000553617 LEPROTL1O95214 131 aa2.03□□□□□ -2.08
TDP1-207ENST00000553617 IGLV3-19P01714 112 aa2.03□□□□□ -2.08
TDP1-207ENST00000553617 SAA2P0DJI9 122 aaPredicted RBP2.03□□□□□ -2.08
TDP1-207ENST00000553617 ATP5EP2Q5VTU8 51 aa2.03□□□□□ -2.08
TDP1-207ENST00000553617 DMAC1Q96GE9 116 aa2.03□□□□□ -2.08
TDP1-207ENST00000553617 MRPL36Q9P0J6 103 aaKnown RBP2.03□□□□□ -2.08
TDP1-207ENST00000553617 UBE2D4Q9Y2X8 147 aa2.03□□□□□ -2.08
TDP1-207ENST00000553617 SIP14410 1827 aa2.03□□□□□ -2.09
TDP1-207ENST00000553617 TSC2P49815 1807 aa2.03□□□□□ -2.09
TDP1-207ENST00000553617 ZNF142P52746 1687 aaPredicted RBP2.02□□□□□ -2.09
TDP1-207ENST00000553617 ALS2Q96Q42 1657 aa2.02□□□□□ -2.09
TDP1-207ENST00000553617 PRRC2BQ5JSZ5 2229 aaKnown RBP2.02□□□□□ -2.09
TDP1-207ENST00000553617 MYO7BQ6PIF6 2116 aa2.02□□□□□ -2.09
TDP1-207ENST00000553617 NUPR2A6NF83 97 aa2.02□□□□□ -2.09
TDP1-207ENST00000553617 ARMS2P0C7Q2 107 aa2.02□□□□□ -2.09
TDP1-207ENST00000553617 CNBPP62633 177 aaKnown RBP2.02□□□□□ -2.09
TDP1-207ENST00000553617 PDE6HQ13956 83 aa2.02□□□□□ -2.09
TDP1-207ENST00000553617 C1orf137Q5JT78 98 aa2.02□□□□□ -2.09
TDP1-207ENST00000553617 LENEPQ9Y5L5 61 aa2.02□□□□□ -2.09
TDP1-207ENST00000553617 COL4A4P53420 1690 aaPredicted RBP2.02□□□□□ -2.09
TDP1-207ENST00000553617 PLCH1Q4KWH8 1693 aa2.02□□□□□ -2.09
TDP1-207ENST00000553617 ADAMTS7Q9UKP4 1686 aa2.02□□□□□ -2.09
TDP1-207ENST00000553617 SPAG17Q6Q759 2223 aa2.02□□□□□ -2.09
TDP1-207ENST00000553617 NWD1Q149M9 1564 aa2.02□□□□□ -2.09
TDP1-207ENST00000553617 VWDEQ8N2E2 1590 aa2.02□□□□□ -2.09
TDP1-207ENST00000553617 ZFHX2Q9C0A1 2572 aaPredicted RBP2.01□□□□□ -2.09
TDP1-207ENST00000553617 CLPSL1A2RUU4 121 aa2.01□□□□□ -2.09
TDP1-207ENST00000553617 D6R8Y8 96 aa2.01□□□□□ -2.09
TDP1-207ENST00000553617 PPP1R17O96001 155 aa2.01□□□□□ -2.09
TDP1-207ENST00000553617 SPAG11BQ08648 103 aa2.01□□□□□ -2.09
TDP1-207ENST00000553617 ATXN8Q156A1 80 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms