RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 MUSTN1Q8IVN3 82 aa6.39□□□□□ -1.39
TMEM116-209ENST00000550020 FAM104AQ969W3 186 aa6.39□□□□□ -1.39
TMEM116-209ENST00000550020 LRRK2Q5S007 2527 aa6.38□□□□□ -1.39
TMEM116-209ENST00000550020 PLAC8L1A1L4L8 177 aa6.38□□□□□ -1.39
TMEM116-209ENST00000550020 PRSS2P07478 247 aa6.38□□□□□ -1.39
TMEM116-209ENST00000550020 COX6CP09669 75 aa6.38□□□□□ -1.39
TMEM116-209ENST00000550020 SPINK8P0C7L1 97 aa6.38□□□□□ -1.39
TMEM116-209ENST00000550020 APOC4P55056 127 aa6.38□□□□□ -1.39
TMEM116-209ENST00000550020 SFTA2Q6UW10 78 aa6.38□□□□□ -1.39
TMEM116-209ENST00000550020 SBSPONQ8IVN8 264 aa6.38□□□□□ -1.39
TMEM116-209ENST00000550020 ATP6V0E2Q8NHE4 81 aa6.38□□□□□ -1.39
TMEM116-209ENST00000550020 PPDPFQ9H3Y8 114 aa6.38□□□□□ -1.39
TMEM116-209ENST00000550020 CDC42SE2Q9NRR3 84 aa6.38□□□□□ -1.39
TMEM116-209ENST00000550020 USP9YO00507 2555 aaPredicted RBP6.37□□□□□ -1.39
TMEM116-209ENST00000550020 TRAV8-3A0A0A6YYJ7 113 aa6.37□□□□□ -1.39
TMEM116-209ENST00000550020 IGLV5-39A0A0G2JS06 123 aa6.37□□□□□ -1.39
TMEM116-209ENST00000550020 Q1RN00 199 aa6.37□□□□□ -1.39
TMEM116-209ENST00000550020 RNASE13Q5GAN3 156 aaKnown RBP6.37□□□□□ -1.39
TMEM116-209ENST00000550020 LINC00242Q5T6M2 205 aa6.37□□□□□ -1.39
TMEM116-209ENST00000550020 Q9UF83 564 aa6.37□□□□□ -1.39
TMEM116-209ENST00000550020 CDKN2A-AS1Q9UH64 79 aa6.37□□□□□ -1.39
TMEM116-209ENST00000550020 PTPN13Q12923 2485 aa6.37□□□□□ -1.39
TMEM116-209ENST00000550020 TRBV6-8A0A0A6YYG3 113 aa6.36□□□□□ -1.39
TMEM116-209ENST00000550020 LYRM9A8MSI8 78 aa6.36□□□□□ -1.39
TMEM116-209ENST00000550020 M0QXV9 152 aa6.36□□□□□ -1.39
TMEM116-209ENST00000550020 IGHV3-33P01772 117 aa6.36□□□□□ -1.39
TMEM116-209ENST00000550020 FHL2Q14192 279 aa6.36□□□□□ -1.39
TMEM116-209ENST00000550020 NTM-AS1Q6ZSK4 140 aa6.36□□□□□ -1.39
TMEM116-209ENST00000550020 LINC00612Q8N6U2 182 aa6.36□□□□□ -1.39
TMEM116-209ENST00000550020 WFDC10AQ9H1F0 79 aa6.36□□□□□ -1.39
TMEM116-209ENST00000550020 ASH1LQ9NR48 2969 aaKnown RBP6.36□□□□□ -1.39
TMEM116-209ENST00000550020 DOPEY2Q9Y3R5 2298 aa6.36□□□□□ -1.39
TMEM116-209ENST00000550020 TRAV13-1A0A0B4J241 112 aa6.35□□□□□ -1.39
TMEM116-209ENST00000550020 TRBV30A0A0K0K1B3 111 aa6.35□□□□□ -1.39
TMEM116-209ENST00000550020 CRLF1O75462 422 aa6.35□□□□□ -1.39
TMEM116-209ENST00000550020 WFDC2Q14508 124 aa6.35□□□□□ -1.39
TMEM116-209ENST00000550020 ATXN8Q156A1 80 aa6.35□□□□□ -1.39
TMEM116-209ENST00000550020 LITAFQ99732 161 aa6.35□□□□□ -1.39
TMEM116-209ENST00000550020 AGRNO00468 2067 aa6.34□□□□□ -1.39
TMEM116-209ENST00000550020 LINC00694P0DN24 101 aa6.34□□□□□ -1.39
TMEM116-209ENST00000550020 SMR3AQ99954 134 aa6.34□□□□□ -1.39
TMEM116-209ENST00000550020 CHCHD5Q9BSY4 110 aa6.34□□□□□ -1.39
TMEM116-209ENST00000550020 PRO0461Q9UI25 63 aa6.34□□□□□ -1.39
TMEM116-209ENST00000550020 PRO0255Q9UI72 69 aa6.34□□□□□ -1.39
TMEM116-209ENST00000550020 UTP20O75691 2785 aaKnown RBP6.34□□□□□ -1.4
TMEM116-209ENST00000550020 POLQO75417 2590 aa6.33□□□□□ -1.4
TMEM116-209ENST00000550020 ZFYVE26Q68DK2 2539 aa6.33□□□□□ -1.4
TMEM116-209ENST00000550020 TEX48A0A1B0GUV7 120 aa6.33□□□□□ -1.4
TMEM116-209ENST00000550020 SMIM1B2RUZ4 78 aa6.33□□□□□ -1.4
TMEM116-209ENST00000550020 INAFM1C9JVW0 142 aa6.33□□□□□ -1.4
TMEM116-209ENST00000550020 PCP4P48539 62 aa6.33□□□□□ -1.4
TMEM116-209ENST00000550020 KRTAP10-3P60369 221 aa6.33□□□□□ -1.4
TMEM116-209ENST00000550020 PRIMA1Q86XR5 153 aa6.33□□□□□ -1.4
TMEM116-209ENST00000550020 Q9H8V8 135 aa6.33□□□□□ -1.4
TMEM116-209ENST00000550020 TCL1BO95988 128 aa6.32□□□□□ -1.4
TMEM116-209ENST00000550020 DEFB130BP0DP73 79 aa6.32□□□□□ -1.4
TMEM116-209ENST00000550020 DEFB130AP0DP74 79 aa6.32□□□□□ -1.4
TMEM116-209ENST00000550020 ETDBQ3ZM63 59 aa6.32□□□□□ -1.4
TMEM116-209ENST00000550020 MEIG1Q5JSS6 88 aa6.32□□□□□ -1.4
TMEM116-209ENST00000550020 SH2D6Q7Z4S9 175 aa6.32□□□□□ -1.4
TMEM116-209ENST00000550020 PPDPFLQ8WWR9 84 aa6.32□□□□□ -1.4
TMEM116-209ENST00000550020 MIFP14174 115 aa6.31□□□□□ -1.4
TMEM116-209ENST00000550020 COX6A2Q02221 97 aa6.31□□□□□ -1.4
TMEM116-209ENST00000550020 GAGE6Q13070 117 aa6.31□□□□□ -1.4
TMEM116-209ENST00000550020 SS18Q15532 418 aa6.31□□□□□ -1.4
TMEM116-209ENST00000550020 TEN1Q86WV5 123 aa6.31□□□□□ -1.4
TMEM116-209ENST00000550020 LINC01561Q8N1V8 128 aa6.31□□□□□ -1.4
TMEM116-209ENST00000550020 CITED1Q99966 193 aa6.31□□□□□ -1.4
TMEM116-209ENST00000550020 X6R8D5 127 aa6.31□□□□□ -1.4
TMEM116-209ENST00000550020 TRAV26-1A0A087WT03 109 aa6.3□□□□□ -1.4
TMEM116-209ENST00000550020 LOC100131303A0A0U1RQF7 123 aa6.3□□□□□ -1.4
TMEM116-209ENST00000550020 A0A1B0GUV1 79 aa6.3□□□□□ -1.4
TMEM116-209ENST00000550020 F5H768 121 aa6.3□□□□□ -1.4
TMEM116-209ENST00000550020 H7C2G1 150 aa6.3□□□□□ -1.4
TMEM116-209ENST00000550020 PAX4O43316 350 aa6.3□□□□□ -1.4
TMEM116-209ENST00000550020 GYPEP15421 78 aa6.3□□□□□ -1.4
TMEM116-209ENST00000550020 ADAMTSL4-AS1Q5T5F5 129 aa6.3□□□□□ -1.4
TMEM116-209ENST00000550020 LINC00308Q8TCZ7 52 aa6.3□□□□□ -1.4
TMEM116-209ENST00000550020 COX7B2Q8TF08 81 aa6.3□□□□□ -1.4
TMEM116-209ENST00000550020 ZNF625Q96I27 306 aaPredicted RBP6.3□□□□□ -1.4
TMEM116-209ENST00000550020 ICOSQ9Y6W8 199 aa6.3□□□□□ -1.4
TMEM116-209ENST00000550020 CELSR1Q9NYQ6 3014 aa6.3□□□□□ -1.4
TMEM116-209ENST00000550020 A8MZ25 164 aa6.29□□□□□ -1.4
TMEM116-209ENST00000550020 WIPF1O43516 503 aa6.29□□□□□ -1.4
TMEM116-209ENST00000550020 SLC25A20O43772 301 aa6.29□□□□□ -1.4
TMEM116-209ENST00000550020 FOXI1Q12951 378 aa6.29□□□□□ -1.4
TMEM116-209ENST00000550020 WFDC9Q8NEX5 89 aa6.29□□□□□ -1.4
TMEM116-209ENST00000550020 LINC01600Q96MT4 127 aa6.29□□□□□ -1.4
TMEM116-209ENST00000550020 ABCA12Q86UK0 2595 aa6.29□□□□□ -1.4
TMEM116-209ENST00000550020 ITPR3Q14573 2671 aa6.29□□□□□ -1.4
TMEM116-209ENST00000550020 APCP25054 2843 aa6.28□□□□□ -1.4
TMEM116-209ENST00000550020 A0A087WZ39 114 aa6.28□□□□□ -1.4
TMEM116-209ENST00000550020 TRAV13-2A0A0B4J235 113 aa6.28□□□□□ -1.4
TMEM116-209ENST00000550020 GAGE12HA6NDE8 117 aa6.28□□□□□ -1.4
TMEM116-209ENST00000550020 C9JAW5 83 aa6.28□□□□□ -1.4
TMEM116-209ENST00000550020 TMEM262E9PQX1 116 aa6.28□□□□□ -1.4
TMEM116-209ENST00000550020 ATP5G1P05496 136 aa6.28□□□□□ -1.4
TMEM116-209ENST00000550020 SPART-AS1P0CW21 52 aa6.28□□□□□ -1.4
TMEM116-209ENST00000550020 SCGB1A1P11684 91 aa6.28□□□□□ -1.4
TMEM116-209ENST00000550020 RPL13AP40429 203 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms