RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 OVOL1O14753 267 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 SH2D1AO60880 128 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 LEPROTL1O95214 131 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 IGHG2P01859 326 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 FAM236CP0DP71 79 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 HLA-DMBP28068 263 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 CSN1S1P47710 185 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 PLGLB1Q02325 96 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 DEFB109BQ30KR1 87 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 SPANXN5Q5MJ07 72 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 LYRM7Q5U5X0 104 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 HRCT1Q6UXD1 115 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 ANKRD29Q8N6D5 301 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 ZFAND2AQ8N6M9 145 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 CCL4L1Q8NHW4 92 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 MYOZ3Q8TDC0 251 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 TMEM147Q9BVK8 224 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 RNASE7Q9H1E1 156 aaKnown RBP2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 OSTCQ9NRP0 149 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 KLK12Q9UKR0 248 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 U3KQK5 164 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 MED13LQ71F56 2210 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 MYO7BQ6PIF6 2116 aa2.39□□□□□ -2.03
SFSWAP-211ENST00000542813 DCHS2Q6V1P9 2916 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 IGLV3-12A0A075B6K2 115 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 A0A0B4J2C4 111 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 FAM236AA0A1B0GUQ0 79 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 FAM236BA0A1B0GV22 79 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 SMIM27A0A1W2PRY6 76 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 A8MU10 97 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 A8MWV9 139 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 COX7A2LO14548 114 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 SLC25A20O43772 301 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 DPM2O94777 84 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 LGALS1P09382 135 aaKnown RBP2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 ARL14EPLP0DKL9 152 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 HLA-DRB4P13762 266 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 DSCR4P56555 118 aaPredicted RBP2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 EBI3Q14213 229 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 FXYD3Q14802 87 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 CST6Q15828 149 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 DEFB133Q30KQ1 61 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 LGALS9BQ3B8N2 356 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 LCE3CQ5T5A8 94 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 LGALS9CQ6DKI2 356 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 SCXQ7RTU7 201 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 PATE1Q8WXA2 126 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 NPCDR1Q9BY65 106 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 HLA-DRB4X5D2U9 266 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 AGRNO00468 2067 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 EXPH5Q8NEV8 1989 aa2.38□□□□□ -2.03
SFSWAP-211ENST00000542813 PKD1L1Q8TDX9 2849 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 NCOA6Q14686 2063 aaPredicted RBP2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 NBEAL2Q6ZNJ1 2754 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 IGHV3OR16-8A0A075B7F1 116 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 TRAV26-2A0A0B4J265 109 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 A0A1W2PQD3 144 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 TCRBV4S1A1TA0A5B7 111 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 OOSP1A8MZH6 123 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 C10orf142B7Z368 130 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 H3BQ85 93 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 LY6LH3BQJ8 138 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 K7EM74 188 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 LECT2O14960 151 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 NDUFC2O95298 119 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 TRACP01848 142 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 IGKV3-11P04433 115 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 COX7CP15954 63 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 CRYGSP22914 178 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 CD24P25063 80 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 PSMB8P28062 276 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 GCHFRP30047 84 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 FOXA3P55318 350 aaPredicted RBP2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 RPL30P62888 115 aaKnown RBP2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 ESPL1Q14674 2120 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 C12orf74Q32Q52 190 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 MRPL51Q4U2R6 128 aaKnown RBP2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 RPS19BP1Q86WX3 136 aaKnown RBP2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 EXOC3-AS1Q8N2X6 119 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 IGF2BP2-AS1Q96M15 143 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 MGAM2Q2M2H8 2515 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 POLEQ07864 2286 aa2.37□□□□□ -2.03
SFSWAP-211ENST00000542813 IGKV2D-24A0A075B6R9 120 aa2.36□□□□□ -2.03
SFSWAP-211ENST00000542813 IGKV3D-11A0A0A0MRZ8 115 aa2.36□□□□□ -2.03
SFSWAP-211ENST00000542813 TRAV2A0A0B4J234 112 aa2.36□□□□□ -2.03
SFSWAP-211ENST00000542813 A8MUN3 132 aa2.36□□□□□ -2.03
SFSWAP-211ENST00000542813 J3QQQ9 107 aa2.36□□□□□ -2.03
SFSWAP-211ENST00000542813 LST1O00453 97 aa2.36□□□□□ -2.03
SFSWAP-211ENST00000542813 DNAH10OSP0CZ25 163 aa2.36□□□□□ -2.03
SFSWAP-211ENST00000542813 INAFM2P0DMQ5 153 aa2.36□□□□□ -2.03
SFSWAP-211ENST00000542813 IGHV3-30-3P0DP02 117 aa2.36□□□□□ -2.03
SFSWAP-211ENST00000542813 FXYD2P54710 66 aa2.36□□□□□ -2.03
SFSWAP-211ENST00000542813 EDDM3BP56851 147 aa2.36□□□□□ -2.03
SFSWAP-211ENST00000542813 TSPEAR-AS2P59090 65 aa2.36□□□□□ -2.03
SFSWAP-211ENST00000542813 EIF4EBP1Q13541 118 aaPredicted RBP2.36□□□□□ -2.03
SFSWAP-211ENST00000542813 RTL8BQ17RB0 113 aa2.36□□□□□ -2.03
SFSWAP-211ENST00000542813 SPINK9Q5DT21 86 aa2.36□□□□□ -2.03
SFSWAP-211ENST00000542813 MIC13Q5XKP0 118 aa2.36□□□□□ -2.03
SFSWAP-211ENST00000542813 Q6ZQT7 251 aa2.36□□□□□ -2.03
SFSWAP-211ENST00000542813 GPHB5Q86YW7 130 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms