RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 FAM231CP0DMU5 169 aa12.85□□□□□ -0.35
PHRF1-206ENST00000534320 HIST2H2BDQ6DRA6 164 aa12.85□□□□□ -0.35
PHRF1-206ENST00000534320 IGKV2D-26A0A0A0MRZ7 120 aa12.85□□□□□ -0.35
PHRF1-206ENST00000534320 ZMAT4Q9H898 229 aa12.85□□□□□ -0.35
PHRF1-206ENST00000534320 DIRC1Q969H9 104 aa12.84□□□□□ -0.35
PHRF1-206ENST00000534320 M0QXV9 152 aa12.84□□□□□ -0.35
PHRF1-206ENST00000534320 DEFB4AO15263 64 aa12.84□□□□□ -0.35
PHRF1-206ENST00000534320 CAMK2N2Q96S95 79 aa12.84□□□□□ -0.35
PHRF1-206ENST00000534320 IGLV10-54A0A075B6I4 117 aa12.84□□□□□ -0.35
PHRF1-206ENST00000534320 IGHV3-30-3P0DP02 117 aa12.83□□□□□ -0.35
PHRF1-206ENST00000534320 Q6ZTI0 123 aa12.83□□□□□ -0.35
PHRF1-206ENST00000534320 MIR7-3HGQ8N6C7 128 aa12.83□□□□□ -0.35
PHRF1-206ENST00000534320 CEMP1Q6PRD7 247 aaPredicted RBP12.83□□□□□ -0.36
PHRF1-206ENST00000534320 CCDC179H3BU77 68 aa12.83□□□□□ -0.36
PHRF1-206ENST00000534320 COX7CP15954 63 aa12.83□□□□□ -0.36
PHRF1-206ENST00000534320 C11orf21Q9P2W6 132 aa12.83□□□□□ -0.36
PHRF1-206ENST00000534320 IGKV2D-24A0A075B6R9 120 aa12.82□□□□□ -0.36
PHRF1-206ENST00000534320 MRPS12O15235 138 aaKnown RBP12.82□□□□□ -0.36
PHRF1-206ENST00000534320 LYRM9A8MSI8 78 aa12.82□□□□□ -0.36
PHRF1-206ENST00000534320 PRR9Q5T870 116 aa12.82□□□□□ -0.36
PHRF1-206ENST00000534320 TIMM17BO60830 172 aa12.81□□□□□ -0.36
PHRF1-206ENST00000534320 RPL18AQ02543 176 aaKnown RBP12.8□□□□□ -0.36
PHRF1-206ENST00000534320 ABCA2Q9BZC7 2435 aa12.8□□□□□ -0.36
PHRF1-206ENST00000534320 ENHOQ6UWT2 76 aa12.8□□□□□ -0.36
PHRF1-206ENST00000534320 PRO0255Q9UI72 69 aa12.8□□□□□ -0.36
PHRF1-206ENST00000534320 SPTBN4Q9H254 2564 aa12.8□□□□□ -0.36
PHRF1-206ENST00000534320 SMIM9A6NGZ8 99 aa12.79□□□□□ -0.36
PHRF1-206ENST00000534320 NEXN-AS1Q8NBZ9 246 aa12.79□□□□□ -0.36
PHRF1-206ENST00000534320 A0A0J9YXY3 114 aa12.79□□□□□ -0.36
PHRF1-206ENST00000534320 NCR3O14931 201 aa12.79□□□□□ -0.36
PHRF1-206ENST00000534320 SMIM26A0A096LP01 95 aa12.79□□□□□ -0.36
PHRF1-206ENST00000534320 NFE4Q86UQ8 179 aa12.79□□□□□ -0.36
PHRF1-206ENST00000534320 PRRC2AP48634 2157 aaKnown RBP12.79□□□□□ -0.36
PHRF1-206ENST00000534320 PCNTO95613 3336 aa12.79□□□□□ -0.36
PHRF1-206ENST00000534320 INAFM1C9JVW0 142 aa12.78□□□□□ -0.36
PHRF1-206ENST00000534320 RAI1Q7Z5J4 1906 aaPredicted RBP12.78□□□□□ -0.36
PHRF1-206ENST00000534320 USP17L23D6RBM5 183 aa12.78□□□□□ -0.36
PHRF1-206ENST00000534320 M0QY20 66 aa12.78□□□□□ -0.36
PHRF1-206ENST00000534320 IGHV3-30P01768 117 aa12.78□□□□□ -0.36
PHRF1-206ENST00000534320 IGHV3-33P01772 117 aa12.78□□□□□ -0.36
PHRF1-206ENST00000534320 IGHV3-30-5P0DP03 117 aa12.78□□□□□ -0.36
PHRF1-206ENST00000534320 RNASE3P12724 160 aaKnown RBP12.78□□□□□ -0.36
PHRF1-206ENST00000534320 SORL1Q92673 2214 aa12.78□□□□□ -0.36
PHRF1-206ENST00000534320 KLLNB2CW77 178 aa12.78□□□□□ -0.36
PHRF1-206ENST00000534320 C18orf65Q6ZTR6 163 aa12.78□□□□□ -0.36
PHRF1-206ENST00000534320 TNRC6BQ9UPQ9 1833 aaKnown RBP12.78□□□□□ -0.36
PHRF1-206ENST00000534320 TRBV30A0A0K0K1B3 111 aa12.77□□□□□ -0.36
PHRF1-206ENST00000534320 K7ERS5 55 aa12.77□□□□□ -0.36
PHRF1-206ENST00000534320 DCANP1Q8TF63 244 aa12.77□□□□□ -0.36
PHRF1-206ENST00000534320 CHD8Q9HCK8 2581 aa12.77□□□□□ -0.36
PHRF1-206ENST00000534320 F8W735 103 aaPredicted RBP12.76□□□□□ -0.37
PHRF1-206ENST00000534320 NDUFA1O15239 70 aa12.76□□□□□ -0.37
PHRF1-206ENST00000534320 CRIP2P52943 208 aaPredicted RBP12.76□□□□□ -0.37
PHRF1-206ENST00000534320 KRTAP10-9P60411 292 aa12.76□□□□□ -0.37
PHRF1-206ENST00000534320 LINC01006Q8NI28 216 aa12.76□□□□□ -0.37
PHRF1-206ENST00000534320 XGP55808 180 aa12.75□□□□□ -0.37
PHRF1-206ENST00000534320 CFAP126Q5VTH2 177 aa12.75□□□□□ -0.37
PHRF1-206ENST00000534320 Q6Q795 121 aa12.75□□□□□ -0.37
PHRF1-206ENST00000534320 LINC00694P0DN24 101 aa12.75□□□□□ -0.37
PHRF1-206ENST00000534320 NRACQ8N912 160 aa12.75□□□□□ -0.37
PHRF1-206ENST00000534320 A6NED7 52 aa12.75□□□□□ -0.37
PHRF1-206ENST00000534320 COX7BP24311 80 aa12.75□□□□□ -0.37
PHRF1-206ENST00000534320 TP73-AS1Q9UF72 201 aa12.75□□□□□ -0.37
PHRF1-206ENST00000534320 HRCT1Q6UXD1 115 aa12.74□□□□□ -0.37
PHRF1-206ENST00000534320 TIRAPP58753 221 aa12.74□□□□□ -0.37
PHRF1-206ENST00000534320 MRPS36P82909 103 aaKnown RBP12.74□□□□□ -0.37
PHRF1-206ENST00000534320 LINC00467Q9BRT7 94 aa12.74□□□□□ -0.37
PHRF1-206ENST00000534320 C2CD3Q4AC94 2353 aa12.74□□□□□ -0.37
PHRF1-206ENST00000534320 MRGPRG-AS1Q2M3A8 158 aa12.73□□□□□ -0.37
PHRF1-206ENST00000534320 PRR15LQ9BU68 103 aa12.73□□□□□ -0.37
PHRF1-206ENST00000534320 CNFNQ9BYD5 112 aa12.73□□□□□ -0.37
PHRF1-206ENST00000534320 H0Y9J4 135 aa12.73□□□□□ -0.37
PHRF1-206ENST00000534320 IGKV4-1P06312 121 aa12.73□□□□□ -0.37
PHRF1-206ENST00000534320 IGLV4-3A0A075B6K6 122 aa12.72□□□□□ -0.37
PHRF1-206ENST00000534320 TRBV27A0A0K0K1C4 114 aa12.72□□□□□ -0.37
PHRF1-206ENST00000534320 TRIAP1O43715 76 aa12.72□□□□□ -0.37
PHRF1-206ENST00000534320 UBE2AP49459 152 aa12.72□□□□□ -0.37
PHRF1-206ENST00000534320 TRBV6-5A0A0K0K1A5 114 aa12.72□□□□□ -0.37
PHRF1-206ENST00000534320 LY6G6DO95868 133 aa12.72□□□□□ -0.37
PHRF1-206ENST00000534320 PROK1P58294 105 aa12.72□□□□□ -0.37
PHRF1-206ENST00000534320 DSCAML1Q8TD84 2053 aa12.71□□□□□ -0.37
PHRF1-206ENST00000534320 CCL18P55774 89 aa12.71□□□□□ -0.37
PHRF1-206ENST00000534320 GAS8-AS1O95177 125 aa12.71□□□□□ -0.38
PHRF1-206ENST00000534320 LINC00310P59036 64 aa12.71□□□□□ -0.38
PHRF1-206ENST00000534320 FAM222AQ5U5X8 452 aa12.71□□□□□ -0.38
PHRF1-206ENST00000534320 PIK3CD-AS1Q5SR53 167 aa12.7□□□□□ -0.38
PHRF1-206ENST00000534320 KLK12Q9UKR0 248 aa12.7□□□□□ -0.38
PHRF1-206ENST00000534320 USP9XQ93008 2570 aaPredicted RBP12.7□□□□□ -0.38
PHRF1-206ENST00000534320 FAM19A3Q7Z5A8 133 aa12.7□□□□□ -0.38
PHRF1-206ENST00000534320 EDN2P20800 178 aa12.69□□□□□ -0.38
PHRF1-206ENST00000534320 C9orf85Q96MD7 179 aa12.69□□□□□ -0.38
PHRF1-206ENST00000534320 HILS1P60008 231 aa12.69□□□□□ -0.38
PHRF1-206ENST00000534320 ZNF22P17026 224 aaPredicted RBP12.69□□□□□ -0.38
PHRF1-206ENST00000534320 SPAG11BQ08648 103 aa12.69□□□□□ -0.38
PHRF1-206ENST00000534320 PLA2G2AP14555 144 aa12.68□□□□□ -0.38
PHRF1-206ENST00000534320 SNURFQ9Y675 71 aa12.68□□□□□ -0.38
PHRF1-206ENST00000534320 TLN2Q9Y4G6 2542 aa12.68□□□□□ -0.38
PHRF1-206ENST00000534320 CHD7Q9P2D1 2997 aa12.68□□□□□ -0.38
PHRF1-206ENST00000534320 CDKN2A-AS1Q9UH64 79 aa12.67□□□□□ -0.38
PHRF1-206ENST00000534320 BRI3O95415 125 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 231.7 ms