RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 SMIM6P0DI80 62 aa4.68□□□□□ -1.66
TRIM53CP-201ENST00000531490 ESDP10768 282 aa4.68□□□□□ -1.66
TRIM53CP-201ENST00000531490 CAMPP49913 170 aa4.68□□□□□ -1.66
TRIM53CP-201ENST00000531490 SPANXN1Q5VSR9 72 aa4.68□□□□□ -1.66
TRIM53CP-201ENST00000531490 LYZL1Q6UWQ5 148 aa4.68□□□□□ -1.66
TRIM53CP-201ENST00000531490 SMIM15Q7Z3B0 74 aa4.68□□□□□ -1.66
TRIM53CP-201ENST00000531490 SH2D6Q7Z4S9 175 aa4.68□□□□□ -1.66
TRIM53CP-201ENST00000531490 BAGE3Q86Y29 109 aa4.68□□□□□ -1.66
TRIM53CP-201ENST00000531490 HIST3H2BBQ8N257 126 aa4.68□□□□□ -1.66
TRIM53CP-201ENST00000531490 FER1L6-AS1Q8NA97 138 aa4.68□□□□□ -1.66
TRIM53CP-201ENST00000531490 GATD1Q8NB37 220 aa4.68□□□□□ -1.66
TRIM53CP-201ENST00000531490 GTSF1Q8WW33 167 aa4.68□□□□□ -1.66
TRIM53CP-201ENST00000531490 PACRGQ96M98 296 aaPredicted RBP4.68□□□□□ -1.66
TRIM53CP-201ENST00000531490 GTSF1LQ9H1H1 148 aa4.68□□□□□ -1.66
TRIM53CP-201ENST00000531490 IGHV3-30P01768 117 aa4.67□□□□□ -1.66
TRIM53CP-201ENST00000531490 IGHV3-33P01772 117 aa4.67□□□□□ -1.66
TRIM53CP-201ENST00000531490 LINC00694P0DN24 101 aa4.67□□□□□ -1.66
TRIM53CP-201ENST00000531490 IGHV3-30-3P0DP02 117 aa4.67□□□□□ -1.66
TRIM53CP-201ENST00000531490 IGHV3-30-5P0DP03 117 aa4.67□□□□□ -1.66
TRIM53CP-201ENST00000531490 NTF3P20783 257 aa4.67□□□□□ -1.66
TRIM53CP-201ENST00000531490 CACNG7P62955 275 aa4.67□□□□□ -1.66
TRIM53CP-201ENST00000531490 TTC32Q5I0X7 151 aa4.67□□□□□ -1.66
TRIM53CP-201ENST00000531490 LELP1Q5T871 98 aa4.67□□□□□ -1.66
TRIM53CP-201ENST00000531490 LINC00518Q8N0U6 118 aa4.67□□□□□ -1.66
TRIM53CP-201ENST00000531490 FAT3Q8TDW7 4589 aa4.67□□□□□ -1.66
TRIM53CP-201ENST00000531490 RHODO00212 210 aa4.66□□□□□ -1.66
TRIM53CP-201ENST00000531490 FABP4P15090 132 aa4.66□□□□□ -1.66
TRIM53CP-201ENST00000531490 RAB4AP20338 218 aa4.66□□□□□ -1.66
TRIM53CP-201ENST00000531490 EVI2AP22794 236 aa4.66□□□□□ -1.66
TRIM53CP-201ENST00000531490 CTRLP40313 264 aa4.66□□□□□ -1.66
TRIM53CP-201ENST00000531490 NEXN-AS1Q8NBZ9 246 aa4.66□□□□□ -1.66
TRIM53CP-201ENST00000531490 CNFNQ9BYD5 112 aa4.66□□□□□ -1.66
TRIM53CP-201ENST00000531490 TRBV7-3A0A075B6L6 115 aa4.65□□□□□ -1.66
TRIM53CP-201ENST00000531490 TRAV9-2A0A087WT02 112 aa4.65□□□□□ -1.66
TRIM53CP-201ENST00000531490 TRAV8-6A0A0B4J262 113 aa4.65□□□□□ -1.66
TRIM53CP-201ENST00000531490 PPBPP02775 128 aa4.65□□□□□ -1.66
TRIM53CP-201ENST00000531490 PMCHP20382 165 aa4.65□□□□□ -1.66
TRIM53CP-201ENST00000531490 UBE2D3P61077 147 aa4.65□□□□□ -1.66
TRIM53CP-201ENST00000531490 UBE2D2P62837 147 aa4.65□□□□□ -1.66
TRIM53CP-201ENST00000531490 ZNF56Q15929 161 aa4.65□□□□□ -1.66
TRIM53CP-201ENST00000531490 KIAA1644Q3SXP7 199 aa4.65□□□□□ -1.66
TRIM53CP-201ENST00000531490 LINC01556Q5JQF7 62 aa4.65□□□□□ -1.66
TRIM53CP-201ENST00000531490 DAZ4Q86SG3 579 aaKnown RBP4.65□□□□□ -1.66
TRIM53CP-201ENST00000531490 OR10D4PQ8NGN7 298 aa4.65□□□□□ -1.66
TRIM53CP-201ENST00000531490 DEFB104AQ8WTQ1 72 aa4.65□□□□□ -1.66
TRIM53CP-201ENST00000531490 CHCHD1Q96BP2 118 aaKnown RBP4.65□□□□□ -1.66
TRIM53CP-201ENST00000531490 DNAJC30Q96LL9 226 aa4.65□□□□□ -1.66
TRIM53CP-201ENST00000531490 C12orf57Q99622 126 aa4.65□□□□□ -1.66
TRIM53CP-201ENST00000531490 HIST1H2BLQ99880 126 aa4.65□□□□□ -1.66
TRIM53CP-201ENST00000531490 ALKBH7Q9BT30 221 aaPredicted RBP4.65□□□□□ -1.66
TRIM53CP-201ENST00000531490 TMEM191AQ9H0A3 160 aa4.65□□□□□ -1.66
TRIM53CP-201ENST00000531490 DAZ3Q9NR90 486 aaKnown RBP4.65□□□□□ -1.66
TRIM53CP-201ENST00000531490 LAMTOR2Q9Y2Q5 125 aa4.65□□□□□ -1.66
TRIM53CP-201ENST00000531490 IGLV5-39A0A0G2JS06 123 aa4.65□□□□□ -1.67
TRIM53CP-201ENST00000531490 TRBV10-1A0A0K0K1A3 114 aa4.65□□□□□ -1.67
TRIM53CP-201ENST00000531490 IBA57-AS1B1ANH7 110 aa4.65□□□□□ -1.67
TRIM53CP-201ENST00000531490 M0QY20 66 aa4.65□□□□□ -1.67
TRIM53CP-201ENST00000531490 RPL36AP83881 106 aaKnown RBP4.65□□□□□ -1.67
TRIM53CP-201ENST00000531490 PDZD11Q5EBL8 140 aa4.65□□□□□ -1.67
TRIM53CP-201ENST00000531490 FAM104BQ5XKR9 115 aa4.65□□□□□ -1.67
TRIM53CP-201ENST00000531490 CFAP161Q6P656 301 aa4.65□□□□□ -1.67
TRIM53CP-201ENST00000531490 NTM-AS1Q6ZSK4 140 aa4.65□□□□□ -1.67
TRIM53CP-201ENST00000531490 C18orf32Q8TCD1 76 aa4.65□□□□□ -1.67
TRIM53CP-201ENST00000531490 Q9HAA7 133 aa4.65□□□□□ -1.67
TRIM53CP-201ENST00000531490 HSBP1O75506 76 aa4.64□□□□□ -1.67
TRIM53CP-201ENST00000531490 SERF1AO75920 110 aa4.64□□□□□ -1.67
TRIM53CP-201ENST00000531490 MGPP08493 103 aa4.64□□□□□ -1.67
TRIM53CP-201ENST00000531490 SMIM17P0DL12 118 aa4.64□□□□□ -1.67
TRIM53CP-201ENST00000531490 S100A12P80511 92 aa4.64□□□□□ -1.67
TRIM53CP-201ENST00000531490 JOSD1Q15040 202 aaPredicted RBP4.64□□□□□ -1.67
TRIM53CP-201ENST00000531490 ORMDL3Q8N138 153 aa4.64□□□□□ -1.67
TRIM53CP-201ENST00000531490 AP1S3Q96PC3 154 aa4.64□□□□□ -1.67
TRIM53CP-201ENST00000531490 RNF213Q63HN8 5207 aa4.63□□□□□ -1.67
TRIM53CP-201ENST00000531490 LRP2P98164 4655 aa4.63□□□□□ -1.67
TRIM53CP-201ENST00000531490 A0A087WTM6 91 aa4.63□□□□□ -1.67
TRIM53CP-201ENST00000531490 TRBV6-8A0A0A6YYG3 113 aa4.63□□□□□ -1.67
TRIM53CP-201ENST00000531490 TRAV26-2A0A0B4J265 109 aa4.63□□□□□ -1.67
TRIM53CP-201ENST00000531490 IFITM10A6NMD0 228 aa4.63□□□□□ -1.67
TRIM53CP-201ENST00000531490 K7EP13 123 aa4.63□□□□□ -1.67
TRIM53CP-201ENST00000531490 PPP1R17O96001 155 aa4.63□□□□□ -1.67
TRIM53CP-201ENST00000531490 LINC00614P0C842 121 aa4.63□□□□□ -1.67
TRIM53CP-201ENST00000531490 CKS2P33552 79 aa4.63□□□□□ -1.67
TRIM53CP-201ENST00000531490 AMTP48728 403 aa4.63□□□□□ -1.67
TRIM53CP-201ENST00000531490 IQCJQ1A5X6 159 aa4.63□□□□□ -1.67
TRIM53CP-201ENST00000531490 NIT1Q86X76 327 aa4.63□□□□□ -1.67
TRIM53CP-201ENST00000531490 LRCOL1A6NCL2 159 aa4.62□□□□□ -1.67
TRIM53CP-201ENST00000531490 TMEM262E9PQX1 116 aa4.62□□□□□ -1.67
TRIM53CP-201ENST00000531490 GAS8-AS1O95177 125 aa4.62□□□□□ -1.67
TRIM53CP-201ENST00000531490 WFDC2Q14508 124 aa4.62□□□□□ -1.67
TRIM53CP-201ENST00000531490 NFE4Q86UQ8 179 aa4.62□□□□□ -1.67
TRIM53CP-201ENST00000531490 C10orf126Q8N4M7 172 aa4.62□□□□□ -1.67
TRIM53CP-201ENST00000531490 MRAP2Q96G30 205 aa4.62□□□□□ -1.67
TRIM53CP-201ENST00000531490 PRELID3AQ96N28 172 aa4.62□□□□□ -1.67
TRIM53CP-201ENST00000531490 DPH3P1Q9H4G8 78 aa4.62□□□□□ -1.67
TRIM53CP-201ENST00000531490 NIT2Q9NQR4 276 aa4.62□□□□□ -1.67
TRIM53CP-201ENST00000531490 KLK12Q9UKR0 248 aa4.62□□□□□ -1.67
TRIM53CP-201ENST00000531490 D6R8Y8 96 aa4.61□□□□□ -1.67
TRIM53CP-201ENST00000531490 MRPL51Q4U2R6 128 aaKnown RBP4.61□□□□□ -1.67
TRIM53CP-201ENST00000531490 PYY3Q5JQD4 70 aa4.61□□□□□ -1.67
TRIM53CP-201ENST00000531490 RNASEKQ6P5S7 137 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms