RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 INSL3P51460 131 aa10.25□□□□□ -0.77
SYNPO-205ENST00000522122 PSMB8P28062 276 aa10.25□□□□□ -0.77
SYNPO-205ENST00000522122 POLR2KP53803 58 aaKnown RBP10.25□□□□□ -0.77
SYNPO-205ENST00000522122 CFAP126Q5VTH2 177 aa10.25□□□□□ -0.77
SYNPO-205ENST00000522122 CEP295Q9C0D2 2601 aa10.25□□□□□ -0.77
SYNPO-205ENST00000522122 PYGO1Q9Y3Y4 419 aa10.25□□□□□ -0.77
SYNPO-205ENST00000522122 IGLV2-18A0A075B6J9 118 aa10.25□□□□□ -0.77
SYNPO-205ENST00000522122 KLLNB2CW77 178 aa10.25□□□□□ -0.77
SYNPO-205ENST00000522122 MRAPQ8TCY5 172 aa10.25□□□□□ -0.77
SYNPO-205ENST00000522122 IGHV4-31P0DP07 118 aa10.24□□□□□ -0.77
SYNPO-205ENST00000522122 CCL18P55774 89 aa10.24□□□□□ -0.77
SYNPO-205ENST00000522122 DIRC1Q969H9 104 aa10.24□□□□□ -0.77
SYNPO-205ENST00000522122 TIRAPP58753 221 aa10.24□□□□□ -0.77
SYNPO-205ENST00000522122 NREPQ16612 68 aa10.24□□□□□ -0.77
SYNPO-205ENST00000522122 PROK1P58294 105 aa10.24□□□□□ -0.77
SYNPO-205ENST00000522122 LINC00308Q8TCZ7 52 aa10.24□□□□□ -0.77
SYNPO-205ENST00000522122 USP9YO00507 2555 aaPredicted RBP10.24□□□□□ -0.77
SYNPO-205ENST00000522122 C14orf132Q9NPU4 83 aa10.24□□□□□ -0.77
SYNPO-205ENST00000522122 HTTP42858 3142 aa10.23□□□□□ -0.77
SYNPO-205ENST00000522122 TRBV30A0A0K0K1B3 111 aa10.23□□□□□ -0.77
SYNPO-205ENST00000522122 TRIAP1O43715 76 aa10.23□□□□□ -0.77
SYNPO-205ENST00000522122 LRRC75A-AS1Q8N1F1 130 aa10.23□□□□□ -0.77
SYNPO-205ENST00000522122 DOPEY1Q5JWR5 2465 aa10.22□□□□□ -0.77
SYNPO-205ENST00000522122 SETD2Q9BYW2 2564 aaPredicted RBP10.22□□□□□ -0.77
SYNPO-205ENST00000522122 TSHBP01222 138 aa10.22□□□□□ -0.77
SYNPO-205ENST00000522122 TMEM258P61165 79 aa10.22□□□□□ -0.77
SYNPO-205ENST00000522122 IGHV4-28A0A0C4DH34 117 aa10.21□□□□□ -0.77
SYNPO-205ENST00000522122 RNF183Q96D59 192 aa10.21□□□□□ -0.77
SYNPO-205ENST00000522122 CRYGDP07320 174 aa10.21□□□□□ -0.78
SYNPO-205ENST00000522122 H7C423 109 aa10.21□□□□□ -0.78
SYNPO-205ENST00000522122 PDE6GP18545 87 aa10.2□□□□□ -0.78
SYNPO-205ENST00000522122 LINC00269Q8N2A0 174 aa10.2□□□□□ -0.78
SYNPO-205ENST00000522122 NDUFV3P56181 108 aaKnown RBP10.2□□□□□ -0.78
SYNPO-205ENST00000522122 PIK3CD-AS1Q5SR53 167 aa10.2□□□□□ -0.78
SYNPO-205ENST00000522122 Q6ZSV7 163 aa10.2□□□□□ -0.78
SYNPO-205ENST00000522122 IBA57-AS1B1ANH7 110 aa10.19□□□□□ -0.78
SYNPO-205ENST00000522122 FAM222AQ5U5X8 452 aa10.19□□□□□ -0.78
SYNPO-205ENST00000522122 ABCA12Q86UK0 2595 aa10.19□□□□□ -0.78
SYNPO-205ENST00000522122 IGLV1-40P01703 118 aa10.19□□□□□ -0.78
SYNPO-205ENST00000522122 C9orf85Q96MD7 179 aa10.19□□□□□ -0.78
SYNPO-205ENST00000522122 ANKRD11Q6UB99 2663 aaPredicted RBP10.19□□□□□ -0.78
SYNPO-205ENST00000522122 REG3AQ06141 175 aa10.19□□□□□ -0.78
SYNPO-205ENST00000522122 Q6ZS46 218 aa10.19□□□□□ -0.78
SYNPO-205ENST00000522122 DCANP1Q8TF63 244 aa10.19□□□□□ -0.78
SYNPO-205ENST00000522122 SMIM9A6NGZ8 99 aa10.18□□□□□ -0.78
SYNPO-205ENST00000522122 A8MZ25 164 aa10.18□□□□□ -0.78
SYNPO-205ENST00000522122 TRBV6-4A0A1B0GX49 114 aa10.18□□□□□ -0.78
SYNPO-205ENST00000522122 CDSNQ15517 529 aa10.18□□□□□ -0.78
SYNPO-205ENST00000522122 TRBV6-8A0A0A6YYG3 113 aa10.17□□□□□ -0.78
SYNPO-205ENST00000522122 PRRC2AP48634 2157 aaKnown RBP10.17□□□□□ -0.78
SYNPO-205ENST00000522122 HIGD2BQ4VC39 106 aa10.17□□□□□ -0.78
SYNPO-205ENST00000522122 TIMM17BO60830 172 aa10.17□□□□□ -0.78
SYNPO-205ENST00000522122 WFDC11Q8NEX6 87 aa10.17□□□□□ -0.78
SYNPO-205ENST00000522122 IGIPA6NJ69 53 aa10.17□□□□□ -0.78
SYNPO-205ENST00000522122 J3KT08 172 aa10.16□□□□□ -0.78
SYNPO-205ENST00000522122 COX7BP24311 80 aa10.16□□□□□ -0.78
SYNPO-205ENST00000522122 CHCHD10Q8WYQ3 142 aaPredicted RBP10.16□□□□□ -0.78
SYNPO-205ENST00000522122 IGLV4-69A0A075B6H9 119 aa10.16□□□□□ -0.78
SYNPO-205ENST00000522122 LYRM9A8MSI8 78 aa10.16□□□□□ -0.78
SYNPO-205ENST00000522122 CRIP2P52943 208 aaPredicted RBP10.16□□□□□ -0.78
SYNPO-205ENST00000522122 JMJD1CQ15652 2540 aa10.16□□□□□ -0.78
SYNPO-205ENST00000522122 ZNF702PQ9H963 129 aa10.16□□□□□ -0.78
SYNPO-205ENST00000522122 ZFYVE26Q68DK2 2539 aa10.15□□□□□ -0.78
SYNPO-205ENST00000522122 UBE2D1P51668 147 aa10.15□□□□□ -0.78
SYNPO-205ENST00000522122 PKIGQ9Y2B9 76 aa10.14□□□□□ -0.79
SYNPO-205ENST00000522122 UBE2D4Q9Y2X8 147 aa10.14□□□□□ -0.79
SYNPO-205ENST00000522122 FN1P02751 2386 aaKnown RBP10.13□□□□□ -0.79
SYNPO-205ENST00000522122 UBE2D3P61077 147 aa10.13□□□□□ -0.79
SYNPO-205ENST00000522122 UBE2D2P62837 147 aa10.13□□□□□ -0.79
SYNPO-205ENST00000522122 PRM2P04554 102 aa10.12□□□□□ -0.79
SYNPO-205ENST00000522122 SLPIP03973 132 aa10.12□□□□□ -0.79
SYNPO-205ENST00000522122 MRPS36P82909 103 aaKnown RBP10.12□□□□□ -0.79
SYNPO-205ENST00000522122 TRAV23DV6A0A075B6W5 121 aa10.12□□□□□ -0.79
SYNPO-205ENST00000522122 LST1O00453 97 aa10.12□□□□□ -0.79
SYNPO-205ENST00000522122 SDIM1Q6ZPB5 146 aa10.12□□□□□ -0.79
SYNPO-205ENST00000522122 NDUFS5O43920 106 aa10.11□□□□□ -0.79
SYNPO-205ENST00000522122 UQCRQO14949 82 aa10.11□□□□□ -0.79
SYNPO-205ENST00000522122 XGP55808 180 aa10.11□□□□□ -0.79
SYNPO-205ENST00000522122 MP68P56378 58 aa10.11□□□□□ -0.79
SYNPO-205ENST00000522122 BRI3O95415 125 aa10.1□□□□□ -0.79
SYNPO-205ENST00000522122 NDUFB1O75438 58 aa10.1□□□□□ -0.79
SYNPO-205ENST00000522122 C18orf65Q6ZTR6 163 aa10.1□□□□□ -0.79
SYNPO-205ENST00000522122 AVPP01185 164 aa10.09□□□□□ -0.79
SYNPO-205ENST00000522122 UPK3BQ9BT76 320 aa10.09□□□□□ -0.79
SYNPO-205ENST00000522122 TSPEAR-AS2P59090 65 aa10.09□□□□□ -0.79
SYNPO-205ENST00000522122 POM121L12Q8N7R1 296 aa10.09□□□□□ -0.79
SYNPO-205ENST00000522122 CHD7Q9P2D1 2997 aa10.09□□□□□ -0.79
SYNPO-205ENST00000522122 C6orf99Q4VX62 202 aa10.08□□□□□ -0.8
SYNPO-205ENST00000522122 PTPRBP23467 1997 aa10.08□□□□□ -0.8
SYNPO-205ENST00000522122 PKD1L2Q7Z442 2459 aa10.08□□□□□ -0.8
SYNPO-205ENST00000522122 LINC00482Q8N8I6 264 aa10.07□□□□□ -0.8
SYNPO-205ENST00000522122 LINC01006Q8NI28 216 aa10.07□□□□□ -0.8
SYNPO-205ENST00000522122 BBC3Q96PG8 261 aaPredicted RBP10.07□□□□□ -0.8
SYNPO-205ENST00000522122 XAGE1AQ9HD64 81 aa10.07□□□□□ -0.8
SYNPO-205ENST00000522122 BPY2O14599 106 aa10.06□□□□□ -0.8
SYNPO-205ENST00000522122 UBE2AP49459 152 aa10.06□□□□□ -0.8
SYNPO-205ENST00000522122 ATP5EP2Q5VTU8 51 aa10.06□□□□□ -0.8
SYNPO-205ENST00000522122 C20orf197Q8N268 126 aa10.06□□□□□ -0.8
SYNPO-205ENST00000522122 C11orf45Q8TAV5 145 aa10.06□□□□□ -0.8
SYNPO-205ENST00000522122 EDN2P20800 178 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms