RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 HIST2H2BDQ6DRA6 164 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 COX7B2Q8TF08 81 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 C9JAW5 83 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 LINC00158P58513 81 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 SH2D6Q7Z4S9 175 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 DCHS2Q6V1P9 2916 aa1.9□□□□□ -2.1
C9orf72-205ENST00000488117 TRAV13-2A0A0B4J235 113 aa1.9□□□□□ -2.1
C9orf72-205ENST00000488117 TRAV8-4A0A0B4J246 113 aa1.9□□□□□ -2.1
C9orf72-205ENST00000488117 SLC25A20O43772 301 aa1.9□□□□□ -2.1
C9orf72-205ENST00000488117 SCGB1A1P11684 91 aa1.9□□□□□ -2.1
C9orf72-205ENST00000488117 GYPEP15421 78 aa1.9□□□□□ -2.1
C9orf72-205ENST00000488117 MALP21145 153 aa1.9□□□□□ -2.1
C9orf72-205ENST00000488117 ETDBQ3ZM63 59 aa1.9□□□□□ -2.1
C9orf72-205ENST00000488117 CDKN2A-AS1Q9UH64 79 aa1.9□□□□□ -2.1
C9orf72-205ENST00000488117 PTPRZ1P23471 2315 aaPredicted RBP1.9□□□□□ -2.11
C9orf72-205ENST00000488117 TRBV30A0A0K0K1B3 111 aa1.9□□□□□ -2.11
C9orf72-205ENST00000488117 TCL1BO95988 128 aa1.9□□□□□ -2.11
C9orf72-205ENST00000488117 WFDC2Q14508 124 aa1.9□□□□□ -2.11
C9orf72-205ENST00000488117 C2orf82Q6UX34 121 aa1.9□□□□□ -2.11
C9orf72-205ENST00000488117 MTURNQ8N3F0 131 aa1.9□□□□□ -2.11
C9orf72-205ENST00000488117 LINC00482Q8N8I6 264 aa1.9□□□□□ -2.11
C9orf72-205ENST00000488117 KIR2DL5BQ8NHK3 375 aa1.9□□□□□ -2.11
C9orf72-205ENST00000488117 RNF183Q96D59 192 aa1.9□□□□□ -2.11
C9orf72-205ENST00000488117 CEP250Q9BV73 2442 aa1.9□□□□□ -2.11
C9orf72-205ENST00000488117 TTC28Q96AY4 2481 aa1.9□□□□□ -2.11
C9orf72-205ENST00000488117 IGLV5-45A0A087WSX0 123 aa1.9□□□□□ -2.11
C9orf72-205ENST00000488117 TRBV6-8A0A0A6YYG3 113 aa1.9□□□□□ -2.11
C9orf72-205ENST00000488117 GAGE12HA6NDE8 117 aa1.9□□□□□ -2.11
C9orf72-205ENST00000488117 IGHV3-33P01772 117 aa1.9□□□□□ -2.11
C9orf72-205ENST00000488117 CKS1BP61024 79 aa1.9□□□□□ -2.11
C9orf72-205ENST00000488117 C6orf226Q5I0X4 101 aa1.9□□□□□ -2.11
C9orf72-205ENST00000488117 FAM19A3Q7Z5A8 133 aa1.9□□□□□ -2.11
C9orf72-205ENST00000488117 TEN1Q86WV5 123 aa1.9□□□□□ -2.11
C9orf72-205ENST00000488117 UBE2WQ96B02 151 aa1.9□□□□□ -2.11
C9orf72-205ENST00000488117 CDC42SE2Q9NRR3 84 aa1.9□□□□□ -2.11
C9orf72-205ENST00000488117 PRO0255Q9UI72 69 aa1.9□□□□□ -2.11
C9orf72-205ENST00000488117 A0A0U1RRA0 63 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 DNAL4O96015 105 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 ATP5G1P05496 136 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 FOXI1Q12951 378 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 LINC01620Q4KN68 170 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 ZNF625Q96I27 306 aaPredicted RBP1.89□□□□□ -2.11
C9orf72-205ENST00000488117 WFDC10AQ9H1F0 79 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 TRRAPQ9Y4A5 3859 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 INAFM1C9JVW0 142 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 M0QXV9 152 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 SPART-AS1P0CW21 52 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 HTN3P15516 51 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 KRTAP1-1Q07627 177 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 FHL2Q14192 279 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 LINC00242Q5T6M2 205 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 ANKRD29Q8N6D5 301 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 TRBV10-2A0A0K0K1G8 114 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 F5H768 121 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 MIFP14174 115 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 CXCL5P42830 114 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 OR13C6PQ8NH95 151 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 LINC00308Q8TCZ7 52 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 RIF1Q5UIP0 2472 aaKnown RBP1.89□□□□□ -2.11
C9orf72-205ENST00000488117 RP1L1Q8IWN7 2480 aaPredicted RBP1.89□□□□□ -2.11
C9orf72-205ENST00000488117 SMIM1B2RUZ4 78 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 H3BT86 120 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 MRPL23Q16540 153 aaKnown RBP1.89□□□□□ -2.11
C9orf72-205ENST00000488117 CARD19Q96LW7 228 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 PCNX1Q96RV3 2341 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 KRTAP4-8Q9BYQ9 185 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 DNAH7Q8WXX0 4024 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 ROS1P08922 2347 aa1.89□□□□□ -2.11
C9orf72-205ENST00000488117 IGLV5-39A0A0G2JS06 123 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 LOC100131303A0A0U1RQF7 123 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 A0A1B0GV72 72 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 LINC00694P0DN24 101 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 COX6A2Q02221 97 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 SBSPONQ8IVN8 264 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 TRIAP1O43715 76 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 DEFB135Q30KP9 77 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 FAM222AQ5U5X8 452 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 DAND5Q8N907 189 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 SMR3AQ99954 134 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 C11orf68Q9H3H3 251 aaKnown RBP1.88□□□□□ -2.11
C9orf72-205ENST00000488117 ANKRD11Q6UB99 2663 aaPredicted RBP1.88□□□□□ -2.11
C9orf72-205ENST00000488117 A8MZ25 164 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 IBA57-AS1B1ANH7 110 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 COX7A2LO14548 114 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 XCL1P47992 114 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 LINC01561Q8N1V8 128 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 CSNK1G2-AS1Q8NCQ2 148 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 SPATA25Q9BR10 227 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 SND1-IT1Q9HBX3 110 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 TRAV26-1A0A087WT03 109 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 A0A096LPF7 62 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 IGHV4-28A0A0C4DH34 117 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 LINC00959A0A1B0GUT2 108 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 ANGP03950 147 aaKnown RBP1.88□□□□□ -2.11
C9orf72-205ENST00000488117 PFN2P35080 140 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 ADAMTSL4-AS1Q5T5F5 129 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 NTM-AS1Q6ZSK4 140 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 C5orf38Q86SI9 138 aa1.88□□□□□ -2.11
C9orf72-205ENST00000488117 NTN5Q8WTR8 489 aaPredicted RBP1.88□□□□□ -2.11
C9orf72-205ENST00000488117 PPDPFQ9H3Y8 114 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms