RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 JMJD7-PLA2G4BH0Y9G9 81 aa10.66□□□□□ -0.7
COL20A1-206ENST00000479501 MIAQ16674 131 aa10.66□□□□□ -0.7
COL20A1-206ENST00000479501 Q9HAA7 133 aa10.66□□□□□ -0.7
COL20A1-206ENST00000479501 Q6ZQT7 251 aa10.66□□□□□ -0.7
COL20A1-206ENST00000479501 DCANP1Q8TF63 244 aa10.66□□□□□ -0.7
COL20A1-206ENST00000479501 IGHV4-4A0A075B6R2 117 aa10.66□□□□□ -0.7
COL20A1-206ENST00000479501 M0QY20 66 aa10.65□□□□□ -0.7
COL20A1-206ENST00000479501 CRIP2P52943 208 aaPredicted RBP10.65□□□□□ -0.7
COL20A1-206ENST00000479501 MIR7-3HGQ8N6C7 128 aa10.65□□□□□ -0.7
COL20A1-206ENST00000479501 FASNP49327 2511 aaKnown RBP10.65□□□□□ -0.7
COL20A1-206ENST00000479501 Q6ZTI0 123 aa10.65□□□□□ -0.71
COL20A1-206ENST00000479501 UQCRQO14949 82 aa10.64□□□□□ -0.71
COL20A1-206ENST00000479501 HHLA3Q9XRX5 114 aa10.64□□□□□ -0.71
COL20A1-206ENST00000479501 NFE4Q86UQ8 179 aa10.64□□□□□ -0.71
COL20A1-206ENST00000479501 INSL3P51460 131 aa10.63□□□□□ -0.71
COL20A1-206ENST00000479501 C14orf132Q9NPU4 83 aa10.63□□□□□ -0.71
COL20A1-206ENST00000479501 TRBV27A0A0K0K1C4 114 aa10.63□□□□□ -0.71
COL20A1-206ENST00000479501 IGHV3-33P01772 117 aa10.63□□□□□ -0.71
COL20A1-206ENST00000479501 COX8CQ7Z4L0 72 aa10.63□□□□□ -0.71
COL20A1-206ENST00000479501 SPATA25Q9BR10 227 aa10.63□□□□□ -0.71
COL20A1-206ENST00000479501 ESM1Q9NQ30 184 aa10.63□□□□□ -0.71
COL20A1-206ENST00000479501 SPART-AS1P0CW21 52 aa10.62□□□□□ -0.71
COL20A1-206ENST00000479501 COX7A2LO14548 114 aa10.62□□□□□ -0.71
COL20A1-206ENST00000479501 CFAP126Q5VTH2 177 aa10.62□□□□□ -0.71
COL20A1-206ENST00000479501 IGLV10-54A0A075B6I4 117 aa10.62□□□□□ -0.71
COL20A1-206ENST00000479501 PSCAO43653 123 aa10.62□□□□□ -0.71
COL20A1-206ENST00000479501 HIST2H2BDQ6DRA6 164 aa10.62□□□□□ -0.71
COL20A1-206ENST00000479501 DEFB135Q30KP9 77 aa10.61□□□□□ -0.71
COL20A1-206ENST00000479501 TRBV6-5A0A0K0K1A5 114 aa10.61□□□□□ -0.71
COL20A1-206ENST00000479501 C18orf65Q6ZTR6 163 aa10.61□□□□□ -0.71
COL20A1-206ENST00000479501 XGP55808 180 aa10.61□□□□□ -0.71
COL20A1-206ENST00000479501 DEFB105AQ8NG35 78 aa10.61□□□□□ -0.71
COL20A1-206ENST00000479501 TRIAP1O43715 76 aa10.61□□□□□ -0.71
COL20A1-206ENST00000479501 UBE2DNLQ8IWF7 75 aa10.61□□□□□ -0.71
COL20A1-206ENST00000479501 ZNF22P17026 224 aaPredicted RBP10.6□□□□□ -0.71
COL20A1-206ENST00000479501 KRTAP10-9P60411 292 aa10.6□□□□□ -0.71
COL20A1-206ENST00000479501 CLUHP3Q96NS8 147 aa10.6□□□□□ -0.71
COL20A1-206ENST00000479501 ACANP16112 2415 aa10.6□□□□□ -0.71
COL20A1-206ENST00000479501 IGLV4-3A0A075B6K6 122 aa10.6□□□□□ -0.71
COL20A1-206ENST00000479501 EDN2P20800 178 aa10.59□□□□□ -0.71
COL20A1-206ENST00000479501 FUSP35637 526 aaKnown RBP eCLIP10.59□□□□□ -0.71
COL20A1-206ENST00000479501 POLR2KP53803 58 aaKnown RBP10.59□□□□□ -0.71
COL20A1-206ENST00000479501 PROK1P58294 105 aa10.59□□□□□ -0.71
COL20A1-206ENST00000479501 DEFB4AO15263 64 aa10.59□□□□□ -0.71
COL20A1-206ENST00000479501 UFSP1Q6NVU6 142 aa10.59□□□□□ -0.71
COL20A1-206ENST00000479501 CDKN2A-AS1Q9UH64 79 aa10.59□□□□□ -0.71
COL20A1-206ENST00000479501 TRAV23DV6A0A075B6W5 121 aa10.59□□□□□ -0.71
COL20A1-206ENST00000479501 NREPQ16612 68 aa10.59□□□□□ -0.71
COL20A1-206ENST00000479501 NDUFC2O95298 119 aa10.58□□□□□ -0.72
COL20A1-206ENST00000479501 BRI3O95415 125 aa10.58□□□□□ -0.72
COL20A1-206ENST00000479501 CRYGDP07320 174 aa10.58□□□□□ -0.72
COL20A1-206ENST00000479501 PTPRBP23467 1997 aa10.58□□□□□ -0.72
COL20A1-206ENST00000479501 ANKRD17O75179 2603 aaKnown RBP10.58□□□□□ -0.72
COL20A1-206ENST00000479501 TRBV30A0A0K0K1B3 111 aa10.58□□□□□ -0.72
COL20A1-206ENST00000479501 SDIM1Q6ZPB5 146 aa10.58□□□□□ -0.72
COL20A1-206ENST00000479501 C20orf197Q8N268 126 aa10.58□□□□□ -0.72
COL20A1-206ENST00000479501 C9orf85Q96MD7 179 aa10.58□□□□□ -0.72
COL20A1-206ENST00000479501 LINC00467Q9BRT7 94 aa10.58□□□□□ -0.72
COL20A1-206ENST00000479501 TMEM256-PLSCR3K7ERE1 68 aa10.58□□□□□ -0.72
COL20A1-206ENST00000479501 PRO0255Q9UI72 69 aa10.58□□□□□ -0.72
COL20A1-206ENST00000479501 TRIOO75962 3097 aa10.58□□□□□ -0.72
COL20A1-206ENST00000479501 LINC01006Q8NI28 216 aa10.57□□□□□ -0.72
COL20A1-206ENST00000479501 TMEM223A0PJW6 202 aa10.57□□□□□ -0.72
COL20A1-206ENST00000479501 IGHV4-28A0A0C4DH34 117 aa10.57□□□□□ -0.72
COL20A1-206ENST00000479501 C3orf22Q8N5N4 141 aa10.56□□□□□ -0.72
COL20A1-206ENST00000479501 IGHV3-30P01768 117 aa10.55□□□□□ -0.72
COL20A1-206ENST00000479501 PRM2P04554 102 aa10.55□□□□□ -0.72
COL20A1-206ENST00000479501 IGHV3-30-5P0DP03 117 aa10.55□□□□□ -0.72
COL20A1-206ENST00000479501 PRB2P02812 416 aaPredicted RBP10.55□□□□□ -0.72
COL20A1-206ENST00000479501 C5orf47Q569G3 176 aa10.55□□□□□ -0.72
COL20A1-206ENST00000479501 ZMAT4Q9H898 229 aa10.54□□□□□ -0.72
COL20A1-206ENST00000479501 CAMK2N2Q96S95 79 aa10.54□□□□□ -0.72
COL20A1-206ENST00000479501 TSHBP01222 138 aa10.54□□□□□ -0.72
COL20A1-206ENST00000479501 LINC00308Q8TCZ7 52 aa10.53□□□□□ -0.72
COL20A1-206ENST00000479501 CCDC179H3BU77 68 aa10.53□□□□□ -0.72
COL20A1-206ENST00000479501 ZNF580Q9UK33 172 aa10.53□□□□□ -0.72
COL20A1-206ENST00000479501 PYGO1Q9Y3Y4 419 aa10.53□□□□□ -0.72
COL20A1-206ENST00000479501 NCR3O14931 201 aa10.52□□□□□ -0.72
COL20A1-206ENST00000479501 A0A096LNJ9 63 aa10.52□□□□□ -0.73
COL20A1-206ENST00000479501 BRK1Q8WUW1 75 aa10.52□□□□□ -0.73
COL20A1-206ENST00000479501 IGKV2D-24A0A075B6R9 120 aa10.52□□□□□ -0.73
COL20A1-206ENST00000479501 H3BQ85 93 aa10.52□□□□□ -0.73
COL20A1-206ENST00000479501 INAFM1C9JVW0 142 aa10.51□□□□□ -0.73
COL20A1-206ENST00000479501 UPK3BQ9BT76 320 aa10.51□□□□□ -0.73
COL20A1-206ENST00000479501 ETDCA0A1B0GVM5 59 aa10.51□□□□□ -0.73
COL20A1-206ENST00000479501 PDE6GP18545 87 aa10.51□□□□□ -0.73
COL20A1-206ENST00000479501 IMUPQ9GZP8 106 aa10.5□□□□□ -0.73
COL20A1-206ENST00000479501 FAM222AQ5U5X8 452 aa10.5□□□□□ -0.73
COL20A1-206ENST00000479501 WFDC9Q8NEX5 89 aa10.5□□□□□ -0.73
COL20A1-206ENST00000479501 NDUFA7O95182 113 aa10.5□□□□□ -0.73
COL20A1-206ENST00000479501 CXCL5P42830 114 aa10.5□□□□□ -0.73
COL20A1-206ENST00000479501 HIGD2BQ4VC39 106 aa10.5□□□□□ -0.73
COL20A1-206ENST00000479501 PIK3CD-AS1Q5SR53 167 aa10.5□□□□□ -0.73
COL20A1-206ENST00000479501 UBE2BP63146 152 aa10.49□□□□□ -0.73
COL20A1-206ENST00000479501 CDH23Q9H251 3354 aa10.49□□□□□ -0.73
COL20A1-206ENST00000479501 MP68P56378 58 aa10.49□□□□□ -0.73
COL20A1-206ENST00000479501 WFDC10AQ9H1F0 79 aa10.49□□□□□ -0.73
COL20A1-206ENST00000479501 CFAP54Q96N23 3096 aa10.49□□□□□ -0.73
COL20A1-206ENST00000479501 SMIM9A6NGZ8 99 aa10.49□□□□□ -0.73
COL20A1-206ENST00000479501 SPAG11BQ08648 103 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms