RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 WFDC2Q14508 124 aa10.51□□□□□ -0.73
NPHP4-208ENST00000478423 ANKRD29Q8N6D5 301 aa10.51□□□□□ -0.73
NPHP4-208ENST00000478423 IGHV4-4A0A075B6R2 117 aa10.51□□□□□ -0.73
NPHP4-208ENST00000478423 RPL32P62910 135 aaKnown RBP10.51□□□□□ -0.73
NPHP4-208ENST00000478423 NRACQ8N912 160 aa10.51□□□□□ -0.73
NPHP4-208ENST00000478423 DSCR8Q96T75 97 aa10.51□□□□□ -0.73
NPHP4-208ENST00000478423 TNRC6BQ9UPQ9 1833 aaKnown RBP10.51□□□□□ -0.73
NPHP4-208ENST00000478423 IGKV2D-26A0A0A0MRZ7 120 aa10.5□□□□□ -0.73
NPHP4-208ENST00000478423 AGRNO00468 2067 aa10.5□□□□□ -0.73
NPHP4-208ENST00000478423 LYRM9A8MSI8 78 aa10.5□□□□□ -0.73
NPHP4-208ENST00000478423 H0YGX0 51 aa10.5□□□□□ -0.73
NPHP4-208ENST00000478423 LINC01620Q4KN68 170 aa10.5□□□□□ -0.73
NPHP4-208ENST00000478423 LINC00269Q8N2A0 174 aa10.49□□□□□ -0.73
NPHP4-208ENST00000478423 C11orf45Q8TAV5 145 aa10.49□□□□□ -0.73
NPHP4-208ENST00000478423 ZNF22P17026 224 aaPredicted RBP10.49□□□□□ -0.73
NPHP4-208ENST00000478423 CRIP2P52943 208 aaPredicted RBP10.49□□□□□ -0.73
NPHP4-208ENST00000478423 ORMDL1Q9P0S3 153 aa10.49□□□□□ -0.73
NPHP4-208ENST00000478423 TRBV6-5A0A0K0K1A5 114 aa10.49□□□□□ -0.73
NPHP4-208ENST00000478423 Q8N976 141 aa10.49□□□□□ -0.73
NPHP4-208ENST00000478423 CDK2AP2O75956 126 aa10.48□□□□□ -0.73
NPHP4-208ENST00000478423 CRYGDP07320 174 aa10.48□□□□□ -0.73
NPHP4-208ENST00000478423 CXCL5P42830 114 aa10.48□□□□□ -0.73
NPHP4-208ENST00000478423 CNFNQ9BYD5 112 aa10.48□□□□□ -0.73
NPHP4-208ENST00000478423 TET2Q6N021 2002 aaPredicted RBP10.48□□□□□ -0.73
NPHP4-208ENST00000478423 A0A0J9YXY3 114 aa10.48□□□□□ -0.73
NPHP4-208ENST00000478423 FAM110AQ9BQ89 295 aa10.47□□□□□ -0.73
NPHP4-208ENST00000478423 TRBV6-4A0A1B0GX49 114 aa10.47□□□□□ -0.73
NPHP4-208ENST00000478423 MRGPRG-AS1Q2M3A8 158 aa10.47□□□□□ -0.73
NPHP4-208ENST00000478423 DEFB105AQ8NG35 78 aa10.47□□□□□ -0.73
NPHP4-208ENST00000478423 RS1O15537 224 aa10.47□□□□□ -0.73
NPHP4-208ENST00000478423 POLR2KP53803 58 aaKnown RBP10.47□□□□□ -0.73
NPHP4-208ENST00000478423 NFE4Q86UQ8 179 aa10.47□□□□□ -0.73
NPHP4-208ENST00000478423 ETDCA0A1B0GVM5 59 aa10.46□□□□□ -0.73
NPHP4-208ENST00000478423 ODF3L2Q3SX64 289 aa10.46□□□□□ -0.73
NPHP4-208ENST00000478423 SHISA2Q6UWI4 295 aa10.46□□□□□ -0.73
NPHP4-208ENST00000478423 C9orf85Q96MD7 179 aa10.46□□□□□ -0.73
NPHP4-208ENST00000478423 REG3AQ06141 175 aa10.46□□□□□ -0.74
NPHP4-208ENST00000478423 TEN1Q86WV5 123 aa10.46□□□□□ -0.74
NPHP4-208ENST00000478423 TRBV6-8A0A0A6YYG3 113 aa10.45□□□□□ -0.74
NPHP4-208ENST00000478423 LINC00310P59036 64 aa10.45□□□□□ -0.74
NPHP4-208ENST00000478423 MAPKAPK5-AS1Q8N8E1 139 aa10.45□□□□□ -0.74
NPHP4-208ENST00000478423 C15orf53Q8NAA6 179 aa10.45□□□□□ -0.74
NPHP4-208ENST00000478423 CRYBA4P53673 196 aa10.45□□□□□ -0.74
NPHP4-208ENST00000478423 MIFP14174 115 aa10.45□□□□□ -0.74
NPHP4-208ENST00000478423 MIAQ16674 131 aa10.45□□□□□ -0.74
NPHP4-208ENST00000478423 TRIOO75962 3097 aa10.44□□□□□ -0.74
NPHP4-208ENST00000478423 LECT2O14960 151 aa10.44□□□□□ -0.74
NPHP4-208ENST00000478423 CLEC2BQ92478 149 aa10.44□□□□□ -0.74
NPHP4-208ENST00000478423 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.44□□□□□ -0.74
NPHP4-208ENST00000478423 DEFB131BA0A096LNP1 70 aa10.43□□□□□ -0.74
NPHP4-208ENST00000478423 TSHBP01222 138 aa10.43□□□□□ -0.74
NPHP4-208ENST00000478423 TRANK1O15050 2925 aa10.43□□□□□ -0.74
NPHP4-208ENST00000478423 NCR3O14931 201 aa10.43□□□□□ -0.74
NPHP4-208ENST00000478423 HIGD2BQ4VC39 106 aa10.43□□□□□ -0.74
NPHP4-208ENST00000478423 CHCHD10Q8WYQ3 142 aaPredicted RBP10.42□□□□□ -0.74
NPHP4-208ENST00000478423 TMEM223A0PJW6 202 aa10.42□□□□□ -0.74
NPHP4-208ENST00000478423 MGAM2Q2M2H8 2515 aa10.42□□□□□ -0.74
NPHP4-208ENST00000478423 RNASE8Q8TDE3 154 aaKnown RBP10.42□□□□□ -0.74
NPHP4-208ENST00000478423 TM2D2Q9BX73 214 aa10.42□□□□□ -0.74
NPHP4-208ENST00000478423 PYGO1Q9Y3Y4 419 aa10.42□□□□□ -0.74
NPHP4-208ENST00000478423 PTH2Q96A98 100 aa10.41□□□□□ -0.74
NPHP4-208ENST00000478423 BRI3O95415 125 aa10.41□□□□□ -0.74
NPHP4-208ENST00000478423 IGHV4-28A0A0C4DH34 117 aa10.41□□□□□ -0.74
NPHP4-208ENST00000478423 LOC100131303A0A0U1RQF7 123 aa10.4□□□□□ -0.74
NPHP4-208ENST00000478423 TIRAPP58753 221 aa10.4□□□□□ -0.74
NPHP4-208ENST00000478423 URB1-AS1Q96HZ7 61 aa10.4□□□□□ -0.74
NPHP4-208ENST00000478423 RBX1P62877 108 aa10.4□□□□□ -0.74
NPHP4-208ENST00000478423 SPANXCQ9NY87 97 aa10.4□□□□□ -0.74
NPHP4-208ENST00000478423 A8MZ25 164 aa10.39□□□□□ -0.75
NPHP4-208ENST00000478423 H7C423 109 aa10.39□□□□□ -0.75
NPHP4-208ENST00000478423 OXLD1Q5BKU9 147 aa10.39□□□□□ -0.75
NPHP4-208ENST00000478423 MAST4O15021 2626 aa10.39□□□□□ -0.75
NPHP4-208ENST00000478423 ZNF580Q9UK33 172 aa10.38□□□□□ -0.75
NPHP4-208ENST00000478423 TRBV10-2A0A0K0K1G8 114 aa10.38□□□□□ -0.75
NPHP4-208ENST00000478423 NDUFA7O95182 113 aa10.38□□□□□ -0.75
NPHP4-208ENST00000478423 C9orf153Q5TBE3 101 aa10.38□□□□□ -0.75
NPHP4-208ENST00000478423 KLK5Q9Y337 293 aaPredicted RBP10.38□□□□□ -0.75
NPHP4-208ENST00000478423 RBMY1FQ15415 496 aaKnown RBP10.37□□□□□ -0.75
NPHP4-208ENST00000478423 ATRQ13535 2644 aa10.37□□□□□ -0.75
NPHP4-208ENST00000478423 MUC4Q99102 2169 aa10.37□□□□□ -0.75
NPHP4-208ENST00000478423 H3BT86 120 aa10.37□□□□□ -0.75
NPHP4-208ENST00000478423 COX8CQ7Z4L0 72 aa10.37□□□□□ -0.75
NPHP4-208ENST00000478423 TCL1BO95988 128 aa10.37□□□□□ -0.75
NPHP4-208ENST00000478423 IGLV1-51P01701 117 aa10.37□□□□□ -0.75
NPHP4-208ENST00000478423 KIR2DL5BQ8NHK3 375 aa10.37□□□□□ -0.75
NPHP4-208ENST00000478423 SPATA25Q9BR10 227 aa10.37□□□□□ -0.75
NPHP4-208ENST00000478423 A0A0B4J2C4 111 aa10.36□□□□□ -0.75
NPHP4-208ENST00000478423 PIK3CD-AS1Q5SR53 167 aa10.36□□□□□ -0.75
NPHP4-208ENST00000478423 DIRC1Q969H9 104 aa10.36□□□□□ -0.75
NPHP4-208ENST00000478423 FOXI1Q12951 378 aa10.36□□□□□ -0.75
NPHP4-208ENST00000478423 UFSP1Q6NVU6 142 aa10.36□□□□□ -0.75
NPHP4-208ENST00000478423 hADV29S1A0JD25 119 aa10.35□□□□□ -0.75
NPHP4-208ENST00000478423 ACYP1P07311 99 aa10.35□□□□□ -0.75
NPHP4-208ENST00000478423 LINC00308Q8TCZ7 52 aa10.35□□□□□ -0.75
NPHP4-208ENST00000478423 DNAH14Q0VDD8 3507 aa10.35□□□□□ -0.75
NPHP4-208ENST00000478423 UBE2D4Q9Y2X8 147 aa10.35□□□□□ -0.75
NPHP4-208ENST00000478423 C2orf91Q6ZV80 131 aa10.35□□□□□ -0.75
NPHP4-208ENST00000478423 FUSP35637 526 aaKnown RBP eCLIP10.34□□□□□ -0.75
NPHP4-208ENST00000478423 PKIGQ9Y2B9 76 aa10.34□□□□□ -0.75
NPHP4-208ENST00000478423 PCSK5Q92824 1860 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms