RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 NDUFA12Q9UI09 145 aa7.61□□□□□ -1.19
APLF-204ENST00000471727 AKAP9Q99996 3911 aa7.61□□□□□ -1.19
APLF-204ENST00000471727 IFITM1P13164 125 aa7.6□□□□□ -1.19
APLF-204ENST00000471727 MUSTN1Q8IVN3 82 aa7.6□□□□□ -1.19
APLF-204ENST00000471727 IGHV3-64A0A075B6Q5 118 aa7.6□□□□□ -1.19
APLF-204ENST00000471727 TRGV2A0A075B6R0 118 aa7.6□□□□□ -1.19
APLF-204ENST00000471727 LOC107984156A0A0G2JMH3 177 aa7.6□□□□□ -1.19
APLF-204ENST00000471727 A4D1N5 150 aa7.6□□□□□ -1.19
APLF-204ENST00000471727 PF4P02776 101 aa7.6□□□□□ -1.19
APLF-204ENST00000471727 RPL35AP18077 110 aaKnown RBP7.6□□□□□ -1.19
APLF-204ENST00000471727 SBSPONQ8IVN8 264 aa7.6□□□□□ -1.19
APLF-204ENST00000471727 ARL17AQ8IVW1 177 aa7.6□□□□□ -1.19
APLF-204ENST00000471727 ATP6V0E2Q8NHE4 81 aa7.6□□□□□ -1.19
APLF-204ENST00000471727 COPS9Q8WXC6 57 aa7.6□□□□□ -1.19
APLF-204ENST00000471727 TMEM101Q96IK0 257 aa7.6□□□□□ -1.19
APLF-204ENST00000471727 PRO0461Q9UI25 63 aa7.6□□□□□ -1.19
APLF-204ENST00000471727 ERG28Q9UKR5 140 aa7.6□□□□□ -1.19
APLF-204ENST00000471727 NACAE9PAV3 2078 aa7.59□□□□□ -1.19
APLF-204ENST00000471727 PLAC8L1A1L4L8 177 aa7.59□□□□□ -1.19
APLF-204ENST00000471727 CIRBPQ14011 172 aaKnown RBP7.59□□□□□ -1.19
APLF-204ENST00000471727 TMEM243Q9BU79 118 aa7.59□□□□□ -1.19
APLF-204ENST00000471727 TRAV8-3A0A0A6YYJ7 113 aa7.58□□□□□ -1.2
APLF-204ENST00000471727 IGLV5-39A0A0G2JS06 123 aa7.58□□□□□ -1.2
APLF-204ENST00000471727 GAGE12JA6NER3 117 aa7.58□□□□□ -1.2
APLF-204ENST00000471727 UBE2L6O14933 153 aa7.58□□□□□ -1.2
APLF-204ENST00000471727 NDUFA1O15239 70 aa7.58□□□□□ -1.2
APLF-204ENST00000471727 IGHV3-33P01772 117 aa7.58□□□□□ -1.2
APLF-204ENST00000471727 GAGE4Q13068 117 aa7.58□□□□□ -1.2
APLF-204ENST00000471727 GAGE5Q13069 117 aa7.58□□□□□ -1.2
APLF-204ENST00000471727 WFDC2Q14508 124 aa7.58□□□□□ -1.2
APLF-204ENST00000471727 MIAQ16674 131 aa7.58□□□□□ -1.2
APLF-204ENST00000471727 RNASE13Q5GAN3 156 aaKnown RBP7.58□□□□□ -1.2
APLF-204ENST00000471727 LINC00482Q8N8I6 264 aa7.58□□□□□ -1.2
APLF-204ENST00000471727 LITAFQ99732 161 aa7.58□□□□□ -1.2
APLF-204ENST00000471727 TLN2Q9Y4G6 2542 aa7.58□□□□□ -1.2
APLF-204ENST00000471727 FLNAP21333 2647 aaKnown RBP7.57□□□□□ -1.2
APLF-204ENST00000471727 TRGV4A0A0C4DH28 118 aa7.57□□□□□ -1.2
APLF-204ENST00000471727 TEX48A0A1B0GUV7 120 aa7.57□□□□□ -1.2
APLF-204ENST00000471727 SMIM9A6NGZ8 99 aa7.57□□□□□ -1.2
APLF-204ENST00000471727 GAGE7O76087 117 aa7.57□□□□□ -1.2
APLF-204ENST00000471727 SPINK8P0C7L1 97 aa7.57□□□□□ -1.2
APLF-204ENST00000471727 GAGE12FP0CL80 117 aa7.57□□□□□ -1.2
APLF-204ENST00000471727 GAGE12GP0CL81 117 aa7.57□□□□□ -1.2
APLF-204ENST00000471727 GAGE12IP0CL82 117 aa7.57□□□□□ -1.2
APLF-204ENST00000471727 SCGB1C2P0DMR2 95 aa7.57□□□□□ -1.2
APLF-204ENST00000471727 PCP4P48539 62 aa7.57□□□□□ -1.2
APLF-204ENST00000471727 PSMB2P49721 201 aa7.57□□□□□ -1.2
APLF-204ENST00000471727 NTM-AS1Q6ZSK4 140 aa7.57□□□□□ -1.2
APLF-204ENST00000471727 KIR2DL5BQ8NHK3 375 aa7.57□□□□□ -1.2
APLF-204ENST00000471727 CDC42SE2Q9NRR3 84 aa7.57□□□□□ -1.2
APLF-204ENST00000471727 CDKN2A-AS1Q9UH64 79 aa7.57□□□□□ -1.2
APLF-204ENST00000471727 SONP18583 2426 aaKnown RBP7.57□□□□□ -1.2
APLF-204ENST00000471727 LINC00242Q5T6M2 205 aa7.56□□□□□ -1.2
APLF-204ENST00000471727 CCDC168Q8NDH2 2452 aa7.56□□□□□ -1.2
APLF-204ENST00000471727 M0QXV9 152 aa7.56□□□□□ -1.2
APLF-204ENST00000471727 LY6G6DO95868 133 aa7.56□□□□□ -1.2
APLF-204ENST00000471727 PRSS2P07478 247 aa7.56□□□□□ -1.2
APLF-204ENST00000471727 C9orf66Q5T8R8 295 aa7.56□□□□□ -1.2
APLF-204ENST00000471727 PPDPFQ9H3Y8 114 aa7.56□□□□□ -1.2
APLF-204ENST00000471727 PDZD2O15018 2839 aa7.55□□□□□ -1.2
APLF-204ENST00000471727 ANK3Q12955 4377 aaKnown RBP7.55□□□□□ -1.2
APLF-204ENST00000471727 TRBV30A0A0K0K1B3 111 aa7.55□□□□□ -1.2
APLF-204ENST00000471727 HERV-K104P63124 156 aa7.55□□□□□ -1.2
APLF-204ENST00000471727 FHL2Q14192 279 aa7.55□□□□□ -1.2
APLF-204ENST00000471727 ETDBQ3ZM63 59 aa7.55□□□□□ -1.2
APLF-204ENST00000471727 WFDC10AQ9H1F0 79 aa7.55□□□□□ -1.2
APLF-204ENST00000471727 ZNF469Q96JG9 3925 aaPredicted RBP7.54□□□□□ -1.2
APLF-204ENST00000471727 LINC00694P0DN24 101 aa7.54□□□□□ -1.2
APLF-204ENST00000471727 LINC00612Q8N6U2 182 aa7.54□□□□□ -1.2
APLF-204ENST00000471727 TCL1BO95988 128 aa7.53□□□□□ -1.2
APLF-204ENST00000471727 COX6CP09669 75 aa7.53□□□□□ -1.2
APLF-204ENST00000471727 KRTAP10-3P60369 221 aa7.53□□□□□ -1.2
APLF-204ENST00000471727 COX6A2Q02221 97 aa7.53□□□□□ -1.2
APLF-204ENST00000471727 NBPF19A0A087WUL8 3843 aa7.53□□□□□ -1.2
APLF-204ENST00000471727 CHD6Q8TD26 2715 aa7.53□□□□□ -1.2
APLF-204ENST00000471727 SMIM1B2RUZ4 78 aa7.52□□□□□ -1.2
APLF-204ENST00000471727 ATXN8Q156A1 80 aa7.52□□□□□ -1.2
APLF-204ENST00000471727 Q1RN00 199 aa7.52□□□□□ -1.2
APLF-204ENST00000471727 ADAMTSL4-AS1Q5T5F5 129 aa7.52□□□□□ -1.2
APLF-204ENST00000471727 TRBV6-8A0A0A6YYG3 113 aa7.52□□□□□ -1.21
APLF-204ENST00000471727 TRAV13-1A0A0B4J241 112 aa7.52□□□□□ -1.21
APLF-204ENST00000471727 SH2D6Q7Z4S9 175 aa7.52□□□□□ -1.21
APLF-204ENST00000471727 LINC01600Q96MT4 127 aa7.52□□□□□ -1.21
APLF-204ENST00000471727 TENM4Q6N022 2769 aa7.52□□□□□ -1.21
APLF-204ENST00000471727 LYRM9A8MSI8 78 aa7.51□□□□□ -1.21
APLF-204ENST00000471727 EIF4EBP3O60516 100 aaPredicted RBP7.51□□□□□ -1.21
APLF-204ENST00000471727 TEN1Q86WV5 123 aa7.51□□□□□ -1.21
APLF-204ENST00000471727 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.51□□□□□ -1.21
APLF-204ENST00000471727 SMR3AQ99954 134 aa7.51□□□□□ -1.21
APLF-204ENST00000471727 Q9H8V8 135 aa7.51□□□□□ -1.21
APLF-204ENST00000471727 KMT2BQ9UMN6 2715 aaPredicted RBP7.5□□□□□ -1.21
APLF-204ENST00000471727 F5H768 121 aa7.5□□□□□ -1.21
APLF-204ENST00000471727 SMCPP49901 116 aaPredicted RBP7.5□□□□□ -1.21
APLF-204ENST00000471727 FOXI1Q12951 378 aa7.5□□□□□ -1.21
APLF-204ENST00000471727 SFTA2Q6UW10 78 aa7.5□□□□□ -1.21
APLF-204ENST00000471727 PPDPFLQ8WWR9 84 aa7.5□□□□□ -1.21
APLF-204ENST00000471727 HIVEP2P31629 2446 aa7.5□□□□□ -1.21
APLF-204ENST00000471727 A8MZ25 164 aa7.49□□□□□ -1.21
APLF-204ENST00000471727 CRLF1O75462 422 aa7.49□□□□□ -1.21
APLF-204ENST00000471727 ZNF625Q96I27 306 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms