RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 TRBV6-8A0A0A6YYG3 113 aa2.07□□□□□ -2.08
COL11A1-208ENST00000470170 TEX49A0A1B0GTD5 131 aa2.07□□□□□ -2.08
COL11A1-208ENST00000470170 SDHAF1A6NFY7 115 aa2.07□□□□□ -2.08
COL11A1-208ENST00000470170 HIGD1CA8MV81 97 aa2.07□□□□□ -2.08
COL11A1-208ENST00000470170 TMEM14DPA8MWL7 114 aa2.07□□□□□ -2.08
COL11A1-208ENST00000470170 UMAD1C9J7I0 102 aa2.07□□□□□ -2.08
COL11A1-208ENST00000470170 IGHV3-30P01768 117 aa2.07□□□□□ -2.08
COL11A1-208ENST00000470170 IGHV3-30-5P0DP03 117 aa2.07□□□□□ -2.08
COL11A1-208ENST00000470170 CFAP126Q5VTH2 177 aa2.07□□□□□ -2.08
COL11A1-208ENST00000470170 PATE1Q8WXA2 126 aa2.07□□□□□ -2.08
COL11A1-208ENST00000470170 ODF3Q96PU9 254 aa2.07□□□□□ -2.08
COL11A1-208ENST00000470170 DYNLRB1Q9NP97 96 aa2.07□□□□□ -2.08
COL11A1-208ENST00000470170 EPG5Q9HCE0 2579 aa2.07□□□□□ -2.08
COL11A1-208ENST00000470170 RGPD3A6NKT7 1758 aaPredicted RBP2.07□□□□□ -2.08
COL11A1-208ENST00000470170 LAMB1P07942 1786 aa2.07□□□□□ -2.08
COL11A1-208ENST00000470170 COL11A1P12107 1806 aaPredicted RBP2.07□□□□□ -2.08
COL11A1-208ENST00000470170 PTPRFP10586 1907 aa2.07□□□□□ -2.08
COL11A1-208ENST00000470170 NRXN1Q9ULB1 1477 aa2.07□□□□□ -2.08
COL11A1-208ENST00000470170 MAST1Q9Y2H9 1570 aa2.06□□□□□ -2.08
COL11A1-208ENST00000470170 PREX2Q70Z35 1606 aa2.06□□□□□ -2.08
COL11A1-208ENST00000470170 TNRC6CQ9HCJ0 1690 aaKnown RBP2.06□□□□□ -2.08
COL11A1-208ENST00000470170 LAMB4A4D0S4 1761 aa2.06□□□□□ -2.08
COL11A1-208ENST00000470170 TRPM7Q96QT4 1865 aa2.06□□□□□ -2.08
COL11A1-208ENST00000470170 ZNF815PA8K554 130 aa2.06□□□□□ -2.08
COL11A1-208ENST00000470170 IGLV6-57P01721 117 aa2.06□□□□□ -2.08
COL11A1-208ENST00000470170 GNGT1P63211 74 aa2.06□□□□□ -2.08
COL11A1-208ENST00000470170 SSBP1Q04837 148 aaKnown RBP2.06□□□□□ -2.08
COL11A1-208ENST00000470170 CYSTM1Q9H1C7 97 aa2.06□□□□□ -2.08
COL11A1-208ENST00000470170 MUC4Q99102 2169 aa2.06□□□□□ -2.08
COL11A1-208ENST00000470170 COL6A3P12111 3177 aa2.06□□□□□ -2.08
COL11A1-208ENST00000470170 ABCA6Q8N139 1617 aa2.06□□□□□ -2.08
COL11A1-208ENST00000470170 LAMB2P55268 1798 aa2.05□□□□□ -2.08
COL11A1-208ENST00000470170 EML5Q05BV3 1969 aa2.05□□□□□ -2.08
COL11A1-208ENST00000470170 A0A0G2JQZ4 141 aa2.05□□□□□ -2.08
COL11A1-208ENST00000470170 C7orf77A4D0Y5 90 aa2.05□□□□□ -2.08
COL11A1-208ENST00000470170 ZNF56Q15929 161 aa2.05□□□□□ -2.08
COL11A1-208ENST00000470170 Q5VV11 94 aa2.05□□□□□ -2.08
COL11A1-208ENST00000470170 XAF1Q6GPH4 301 aa2.05□□□□□ -2.08
COL11A1-208ENST00000470170 LENEPQ9Y5L5 61 aa2.05□□□□□ -2.08
COL11A1-208ENST00000470170 V9GYH0 126 aa2.05□□□□□ -2.08
COL11A1-208ENST00000470170 NWD2Q9ULI1 1742 aa2.05□□□□□ -2.08
COL11A1-208ENST00000470170 MYO16Q9Y6X6 1858 aa2.05□□□□□ -2.08
COL11A1-208ENST00000470170 FREM3P0C091 2139 aa2.05□□□□□ -2.08
COL11A1-208ENST00000470170 PTPN13Q12923 2485 aa2.05□□□□□ -2.08
COL11A1-208ENST00000470170 SZT2Q5T011 3432 aa2.04□□□□□ -2.08
COL11A1-208ENST00000470170 A0A087WXM4 84 aa2.04□□□□□ -2.08
COL11A1-208ENST00000470170 IGLV3-32A0A0A0MS00 114 aa2.04□□□□□ -2.08
COL11A1-208ENST00000470170 IGKV2-24A0A0C4DH68 120 aa2.04□□□□□ -2.08
COL11A1-208ENST00000470170 TRBV6-4A0A1B0GX49 114 aa2.04□□□□□ -2.08
COL11A1-208ENST00000470170 HMGN2P05204 90 aaKnown RBP2.04□□□□□ -2.08
COL11A1-208ENST00000470170 PDE6GP18545 87 aa2.04□□□□□ -2.08
COL11A1-208ENST00000470170 EFNA4P52798 201 aa2.04□□□□□ -2.08
COL11A1-208ENST00000470170 MYO9BQ13459 2157 aa2.04□□□□□ -2.08
COL11A1-208ENST00000470170 PRR14LQ5THK1 2151 aa2.04□□□□□ -2.08
COL11A1-208ENST00000470170 FAM208BQ5VWN6 2430 aa2.04□□□□□ -2.08
COL11A1-208ENST00000470170 Q86TA4 180 aa2.04□□□□□ -2.08
COL11A1-208ENST00000470170 FAM223AQ8IWN6 122 aa2.04□□□□□ -2.08
COL11A1-208ENST00000470170 PATJQ8NI35 1801 aa2.04□□□□□ -2.08
COL11A1-208ENST00000470170 PPP1R1CQ8WVI7 109 aa2.04□□□□□ -2.08
COL11A1-208ENST00000470170 BPESC1Q9GZL8 116 aa2.04□□□□□ -2.08
COL11A1-208ENST00000470170 CDC42SE2Q9NRR3 84 aa2.04□□□□□ -2.08
COL11A1-208ENST00000470170 SCN11AQ9UI33 1791 aa2.04□□□□□ -2.08
COL11A1-208ENST00000470170 CASP8AP2Q9UKL3 1982 aa2.04□□□□□ -2.08
COL11A1-208ENST00000470170 KLK9Q9UKQ9 250 aa2.04□□□□□ -2.08
COL11A1-208ENST00000470170 INO80Q9ULG1 1556 aaPredicted RBP2.04□□□□□ -2.08
COL11A1-208ENST00000470170 GOLGB1Q14789 3259 aaKnown RBP2.04□□□□□ -2.08
COL11A1-208ENST00000470170 TCHHQ07283 1943 aa2.03□□□□□ -2.08
COL11A1-208ENST00000470170 TANC1Q9C0D5 1861 aa2.03□□□□□ -2.08
COL11A1-208ENST00000470170 MUC22E2RYF6 1773 aaPredicted RBP2.03□□□□□ -2.08
COL11A1-208ENST00000470170 LRRC37A3O60309 1634 aa2.03□□□□□ -2.08
COL11A1-208ENST00000470170 SLIT1O75093 1534 aa2.03□□□□□ -2.08
COL11A1-208ENST00000470170 IGKV3-7A0A075B6H7 116 aa2.03□□□□□ -2.08
COL11A1-208ENST00000470170 TRBV6-7A0A0A0MS04 114 aa2.03□□□□□ -2.08
COL11A1-208ENST00000470170 JMJD7-PLA2G4BH0Y9G9 81 aa2.03□□□□□ -2.08
COL11A1-208ENST00000470170 PPP1R17O96001 155 aa2.03□□□□□ -2.08
COL11A1-208ENST00000470170 DNAL4O96015 105 aa2.03□□□□□ -2.08
COL11A1-208ENST00000470170 PPYP01298 95 aa2.03□□□□□ -2.08
COL11A1-208ENST00000470170 SAA2P0DJI9 122 aaPredicted RBP2.03□□□□□ -2.08
COL11A1-208ENST00000470170 SPAG11BQ08648 103 aa2.03□□□□□ -2.08
COL11A1-208ENST00000470170 PSMG4Q5JS54 123 aa2.03□□□□□ -2.08
COL11A1-208ENST00000470170 FAM74A4Q5TZK3 123 aa2.03□□□□□ -2.08
COL11A1-208ENST00000470170 SPAG11AQ6PDA7 123 aa2.03□□□□□ -2.08
COL11A1-208ENST00000470170 SFTA2Q6UW10 78 aa2.03□□□□□ -2.08
COL11A1-208ENST00000470170 C20orf197Q8N268 126 aa2.03□□□□□ -2.08
COL11A1-208ENST00000470170 PRO3102Q9H379 93 aa2.03□□□□□ -2.08
COL11A1-208ENST00000470170 TMEM14BQ9NUH8 114 aa2.03□□□□□ -2.08
COL11A1-208ENST00000470170 TPRP12270 2363 aaKnown RBP2.02□□□□□ -2.09
COL11A1-208ENST00000470170 SYCP2Q9BX26 1530 aa2.02□□□□□ -2.09
COL11A1-208ENST00000470170 UNC80Q8N2C7 3258 aa2.02□□□□□ -2.09
COL11A1-208ENST00000470170 PTPRDP23468 1912 aa2.02□□□□□ -2.09
COL11A1-208ENST00000470170 LOC101927531A0A1B0GV80 90 aa2.02□□□□□ -2.09
COL11A1-208ENST00000470170 HMGN4O00479 90 aa2.02□□□□□ -2.09
COL11A1-208ENST00000470170 AMELXQ99217 191 aa2.02□□□□□ -2.09
COL11A1-208ENST00000470170 NDUFA4L2Q9NRX3 87 aa2.02□□□□□ -2.09
COL11A1-208ENST00000470170 LTN1O94822 1766 aa2.02□□□□□ -2.09
COL11A1-208ENST00000470170 CHD6Q8TD26 2715 aa2.02□□□□□ -2.09
COL11A1-208ENST00000470170 FCGBPQ9Y6R7 5405 aaPredicted RBP2.01□□□□□ -2.09
COL11A1-208ENST00000470170 PLXNA1Q9UIW2 1896 aa2.01□□□□□ -2.09
COL11A1-208ENST00000470170 MYMXA0A1B0GTQ4 84 aa2.01□□□□□ -2.09
COL11A1-208ENST00000470170 A0A1B0GWA3 101 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms