RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 AEBP2Q6ZN18 517 aaPredicted RBP34.54■■■■□ 3.12
COL11A1-208ENST00000470170 CHIC1Q5VXU3 224 aa33.26■■■□□ 2.91
COL11A1-208ENST00000470170 SENP3Q9H4L4 574 aaPredicted RBP29.32■■■□□ 2.28
COL11A1-208ENST00000470170 PHF23Q9BUL5 403 aaPredicted RBP29.24■■■□□ 2.27
COL11A1-208ENST00000470170 FOXD1Q16676 465 aa27.31■■□□□ 1.96
COL11A1-208ENST00000470170 PLPPR3Q6T4P5 718 aa26.8■■□□□ 1.88
COL11A1-208ENST00000470170 PPP6R1Q9UPN7 881 aa25.95■■□□□ 1.74
COL11A1-208ENST00000470170 ADRA2BP18089 450 aa25.91■■□□□ 1.74
COL11A1-208ENST00000470170 PIAS4Q8N2W9 510 aaPredicted RBP25.65■■□□□ 1.7
COL11A1-208ENST00000470170 MSH5O43196 834 aa25.31■■□□□ 1.64
COL11A1-208ENST00000470170 POTEDQ86YR6 584 aa23.87■■□□□ 1.41
COL11A1-208ENST00000470170 MAPK8IP2Q13387 824 aaPredicted RBP23.65■■□□□ 1.38
COL11A1-208ENST00000470170 SCAF1Q9H7N4 1312 aaKnown RBP23.62■■□□□ 1.37
COL11A1-208ENST00000470170 PPP4R3CPQ6ZMV5 832 aa23.58■■□□□ 1.37
COL11A1-208ENST00000470170 DMRT2Q9Y5R5 561 aa23.34■■□□□ 1.33
COL11A1-208ENST00000470170 CNKSR2Q8WXI2 1034 aa22.99■■□□□ 1.27
COL11A1-208ENST00000470170 NCBP3Q53F19 620 aaKnown RBP22.79■■□□□ 1.24
COL11A1-208ENST00000470170 HOXD11P31277 338 aaPredicted RBP22.68■■□□□ 1.22
COL11A1-208ENST00000470170 RNF216Q9NWF9 866 aaPredicted RBP22.65■■□□□ 1.22
COL11A1-208ENST00000470170 KCNA4P22459 653 aa22.56■■□□□ 1.2
COL11A1-208ENST00000470170 NPM3O75607 178 aaKnown RBP22.51■■□□□ 1.19
COL11A1-208ENST00000470170 DCAF8L1A6NGE4 600 aa22.42■■□□□ 1.18
COL11A1-208ENST00000470170 DNAJC5BQ9UF47 199 aa21.83■■□□□ 1.09
COL11A1-208ENST00000470170 RNF39Q9H2S5 420 aa21.67■■□□□ 1.06
COL11A1-208ENST00000470170 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.63■■□□□ 1.05
COL11A1-208ENST00000470170 CACNB1Q02641 598 aaPredicted RBP21.44■■□□□ 1.02
COL11A1-208ENST00000470170 SLC4A1APQ9BWU0 796 aaKnown RBP21.38■■□□□ 1.01
COL11A1-208ENST00000470170 SLC4A2P04920 1241 aa21.37■■□□□ 1.01
COL11A1-208ENST00000470170 C1QBPQ07021 282 aaKnown RBP21.35■■□□□ 1.01
COL11A1-208ENST00000470170 U3KPZ7 1027 aaPredicted RBP21.25■□□□□ 0.99
COL11A1-208ENST00000470170 FOXD4L1Q9NU39 408 aa20.86■□□□□ 0.93
COL11A1-208ENST00000470170 SPINK5Q9NQ38 1064 aaPredicted RBP20.81■□□□□ 0.92
COL11A1-208ENST00000470170 MYCNP04198 464 aaPredicted RBP20.79■□□□□ 0.92
COL11A1-208ENST00000470170 ZBTB22O15209 634 aa20.78■□□□□ 0.92
COL11A1-208ENST00000470170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.76■□□□□ 0.91
COL11A1-208ENST00000470170 HNRNPUL2Q1KMD3 747 aaKnown RBP20.76■□□□□ 0.91
COL11A1-208ENST00000470170 CAPN15O75808 1086 aa20.73■□□□□ 0.91
COL11A1-208ENST00000470170 SAMD1Q6SPF0 538 aaPredicted RBP20.69■□□□□ 0.9
COL11A1-208ENST00000470170 APLP2Q06481 763 aa20.63■□□□□ 0.89
COL11A1-208ENST00000470170 TRHP20396 242 aaPredicted RBP20.54■□□□□ 0.88
COL11A1-208ENST00000470170 DSG3P32926 999 aa20.47■□□□□ 0.87
COL11A1-208ENST00000470170 ZNF219Q9P2Y4 722 aaPredicted RBP20.47■□□□□ 0.87
COL11A1-208ENST00000470170 ABCB7O75027 752 aa20.33■□□□□ 0.85
COL11A1-208ENST00000470170 ATF5Q9Y2D1 282 aaPredicted RBP20.33■□□□□ 0.85
COL11A1-208ENST00000470170 EHMT2Q96KQ7 1210 aa20.32■□□□□ 0.84
COL11A1-208ENST00000470170 CSRNP3Q8WYN3 585 aa20.26■□□□□ 0.83
COL11A1-208ENST00000470170 ATXN8OSP0DMR3 200 aa20.12■□□□□ 0.81
COL11A1-208ENST00000470170 POLA2Q14181 598 aa20.09■□□□□ 0.81
COL11A1-208ENST00000470170 ZBTB12Q9Y330 459 aaPredicted RBP19.66■□□□□ 0.74
COL11A1-208ENST00000470170 RBM42Q9BTD8 480 aaKnown RBP19.48■□□□□ 0.71
COL11A1-208ENST00000470170 OSCARQ8IYS5 282 aa19.45■□□□□ 0.7
COL11A1-208ENST00000470170 FBLN2P98095 1184 aa19.43■□□□□ 0.7
COL11A1-208ENST00000470170 MKRN4PQ13434 485 aaPredicted RBP19.4■□□□□ 0.7
COL11A1-208ENST00000470170 AKT1S1Q96B36 256 aa19.15■□□□□ 0.66
COL11A1-208ENST00000470170 SPDYE2BA6NHP3 402 aa19.12■□□□□ 0.65
COL11A1-208ENST00000470170 SPDYE6P0CI01 402 aa19.12■□□□□ 0.65
COL11A1-208ENST00000470170 SPDYE2Q495Y8 402 aa19.12■□□□□ 0.65
COL11A1-208ENST00000470170 REM2Q8IYK8 340 aaPredicted RBP19■□□□□ 0.63
COL11A1-208ENST00000470170 ZNF692Q9BU19 519 aaPredicted RBP19■□□□□ 0.63
COL11A1-208ENST00000470170 SSUH2Q9Y2M2 353 aa18.94■□□□□ 0.62
COL11A1-208ENST00000470170 CHRDL2Q6WN34 429 aa18.89■□□□□ 0.61
COL11A1-208ENST00000470170 PITPNM1O00562 1244 aa18.81■□□□□ 0.6
COL11A1-208ENST00000470170 POTEHQ6S545 545 aa18.8■□□□□ 0.6
COL11A1-208ENST00000470170 PABPN1Q86U42 306 aaKnown RBP eCLIP18.75■□□□□ 0.59
COL11A1-208ENST00000470170 SPDYE4A6NLX3 237 aa18.73■□□□□ 0.59
COL11A1-208ENST00000470170 SPDYE1Q8NFV5 336 aaPredicted RBP18.66■□□□□ 0.58
COL11A1-208ENST00000470170 CLEC11AQ9Y240 323 aa18.66■□□□□ 0.58
COL11A1-208ENST00000470170 PIP4P2Q8N4L2 257 aa18.56■□□□□ 0.56
COL11A1-208ENST00000470170 FXR2P51116 673 aaKnown RBP eCLIP18.51■□□□□ 0.55
COL11A1-208ENST00000470170 PRR29P0C7W0 189 aa18.39■□□□□ 0.53
COL11A1-208ENST00000470170 FKBP8Q14318 412 aa18.35■□□□□ 0.53
COL11A1-208ENST00000470170 PRKAR2AP13861 404 aaKnown RBP18.33■□□□□ 0.52
COL11A1-208ENST00000470170 PROM2Q8N271 834 aa18.33■□□□□ 0.52
COL11A1-208ENST00000470170 STAG3Q9UJ98 1225 aa18.29■□□□□ 0.52
COL11A1-208ENST00000470170 CHADLQ6NUI6 762 aa18.26■□□□□ 0.51
COL11A1-208ENST00000470170 HAX1O00165 279 aa18.08■□□□□ 0.48
COL11A1-208ENST00000470170 CREBZFQ9NS37 354 aa18.07■□□□□ 0.48
COL11A1-208ENST00000470170 FARP1Q9Y4F1 1045 aaPredicted RBP18■□□□□ 0.47
COL11A1-208ENST00000470170 EVX2Q03828 476 aa17.93■□□□□ 0.46
COL11A1-208ENST00000470170 C19orf67A6NJJ6 358 aa17.9■□□□□ 0.46
COL11A1-208ENST00000470170 SP7Q8TDD2 431 aaPredicted RBP17.86■□□□□ 0.45
COL11A1-208ENST00000470170 MNX1P50219 401 aaPredicted RBP17.83■□□□□ 0.44
COL11A1-208ENST00000470170 MIER1Q8N108 512 aa17.81■□□□□ 0.44
COL11A1-208ENST00000470170 CD44P16070 742 aaKnown RBP17.78■□□□□ 0.44
COL11A1-208ENST00000470170 FBXO3Q9UK99 471 aa17.75■□□□□ 0.43
COL11A1-208ENST00000470170 PLCD3Q8N3E9 789 aa17.74■□□□□ 0.43
COL11A1-208ENST00000470170 NPM1P06748 294 aaKnown RBP eCLIP17.72■□□□□ 0.43
COL11A1-208ENST00000470170 PLEKHG5O94827 1062 aa17.71■□□□□ 0.43
COL11A1-208ENST00000470170 ZRANB1Q9UGI0 708 aa17.61■□□□□ 0.41
COL11A1-208ENST00000470170 VASPP50552 380 aaPredicted RBP17.58■□□□□ 0.4
COL11A1-208ENST00000470170 PAK3O75914 559 aaPredicted RBP17.54■□□□□ 0.4
COL11A1-208ENST00000470170 GABBR2O75899 941 aa17.52■□□□□ 0.4
COL11A1-208ENST00000470170 ZBTB47Q9UFB7 747 aaPredicted RBP17.51■□□□□ 0.39
COL11A1-208ENST00000470170 ZNF579Q8NAF0 562 aaKnown RBP17.5■□□□□ 0.39
COL11A1-208ENST00000470170 TSPYL2Q9H2G4 693 aaPredicted RBP17.47■□□□□ 0.39
COL11A1-208ENST00000470170 RASEFQ8IZ41 740 aa17.45■□□□□ 0.38
COL11A1-208ENST00000470170 PHF12Q96QT6 1004 aa17.44■□□□□ 0.38
COL11A1-208ENST00000470170 NUBP1P53384 320 aa17.4■□□□□ 0.38
COL11A1-208ENST00000470170 KLHL34Q8N239 644 aa17.37■□□□□ 0.37
COL11A1-208ENST00000470170 CLCN6P51797 869 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms