RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 TRBV6-4A0A1B0GX49 114 aa11.24□□□□□ -0.61
LIMS2-213ENST00000469300 DEFB131BA0A096LNP1 70 aa11.24□□□□□ -0.61
LIMS2-213ENST00000469300 V9GYY9 64 aa11.24□□□□□ -0.61
LIMS2-213ENST00000469300 TP53TG3Q9ULZ0 132 aa11.24□□□□□ -0.61
LIMS2-213ENST00000469300 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.23□□□□□ -0.61
LIMS2-213ENST00000469300 IGHV1-58A0A0C4DH39 117 aa11.23□□□□□ -0.61
LIMS2-213ENST00000469300 ODF1Q14990 250 aa11.23□□□□□ -0.61
LIMS2-213ENST00000469300 YPEL4Q96NS1 127 aa11.22□□□□□ -0.61
LIMS2-213ENST00000469300 MRPL55Q7Z7F7 128 aaKnown RBP11.21□□□□□ -0.61
LIMS2-213ENST00000469300 Q6ZS46 218 aa11.21□□□□□ -0.62
LIMS2-213ENST00000469300 KLLNB2CW77 178 aa11.2□□□□□ -0.62
LIMS2-213ENST00000469300 LINC00482Q8N8I6 264 aa11.2□□□□□ -0.62
LIMS2-213ENST00000469300 TRAV10A0A0B4J240 114 aa11.19□□□□□ -0.62
LIMS2-213ENST00000469300 OPRPNQ99935 248 aaPredicted RBP11.19□□□□□ -0.62
LIMS2-213ENST00000469300 PIK3CD-AS1Q5SR53 167 aa11.19□□□□□ -0.62
LIMS2-213ENST00000469300 C3orf22Q8N5N4 141 aa11.19□□□□□ -0.62
LIMS2-213ENST00000469300 TCL1BO95988 128 aa11.19□□□□□ -0.62
LIMS2-213ENST00000469300 TP73-AS1Q9UF72 201 aa11.19□□□□□ -0.62
LIMS2-213ENST00000469300 GDF5OSQ5U4N7 250 aa11.19□□□□□ -0.62
LIMS2-213ENST00000469300 CFAP126Q5VTH2 177 aa11.19□□□□□ -0.62
LIMS2-213ENST00000469300 SVIPQ8NHG7 77 aa11.18□□□□□ -0.62
LIMS2-213ENST00000469300 DCANP1Q8TF63 244 aa11.18□□□□□ -0.62
LIMS2-213ENST00000469300 PRUNE2Q8WUY3 3088 aa11.18□□□□□ -0.62
LIMS2-213ENST00000469300 TRBV6-5A0A0K0K1A5 114 aa11.18□□□□□ -0.62
LIMS2-213ENST00000469300 CRIP1P50238 77 aa11.18□□□□□ -0.62
LIMS2-213ENST00000469300 REG3AQ06141 175 aa11.18□□□□□ -0.62
LIMS2-213ENST00000469300 C16orf95Q9H693 158 aa11.18□□□□□ -0.62
LIMS2-213ENST00000469300 BPTFQ12830 3046 aa11.17□□□□□ -0.62
LIMS2-213ENST00000469300 FASNP49327 2511 aaKnown RBP11.17□□□□□ -0.62
LIMS2-213ENST00000469300 JMJD7-PLA2G4BH0Y9G9 81 aa11.17□□□□□ -0.62
LIMS2-213ENST00000469300 M0QY20 66 aa11.17□□□□□ -0.62
LIMS2-213ENST00000469300 IGLV2-11P01706 119 aa11.17□□□□□ -0.62
LIMS2-213ENST00000469300 LRRK2Q5S007 2527 aa11.17□□□□□ -0.62
LIMS2-213ENST00000469300 ZNF462Q96JM2 2506 aa11.17□□□□□ -0.62
LIMS2-213ENST00000469300 NEXN-AS1Q8NBZ9 246 aa11.16□□□□□ -0.62
LIMS2-213ENST00000469300 UFSP1Q6NVU6 142 aa11.16□□□□□ -0.62
LIMS2-213ENST00000469300 TRBV6-8A0A0A6YYG3 113 aa11.15□□□□□ -0.62
LIMS2-213ENST00000469300 P0DMU3 169 aa11.15□□□□□ -0.62
LIMS2-213ENST00000469300 FAM231AP0DMU4 169 aa11.15□□□□□ -0.62
LIMS2-213ENST00000469300 FAM231CP0DMU5 169 aa11.15□□□□□ -0.62
LIMS2-213ENST00000469300 BBC3Q96PG8 261 aaPredicted RBP11.15□□□□□ -0.62
LIMS2-213ENST00000469300 MRGPRG-AS1Q2M3A8 158 aa11.15□□□□□ -0.63
LIMS2-213ENST00000469300 LINC00269Q8N2A0 174 aa11.14□□□□□ -0.63
LIMS2-213ENST00000469300 IGHV4-28A0A0C4DH34 117 aa11.14□□□□□ -0.63
LIMS2-213ENST00000469300 FAM236DA0A1B0GTK5 79 aa11.14□□□□□ -0.63
LIMS2-213ENST00000469300 COL4A2P08572 1712 aa11.14□□□□□ -0.63
LIMS2-213ENST00000469300 FAM236CP0DP71 79 aa11.14□□□□□ -0.63
LIMS2-213ENST00000469300 FUSP35637 526 aaKnown RBP eCLIP11.14□□□□□ -0.63
LIMS2-213ENST00000469300 C18orf65Q6ZTR6 163 aa11.14□□□□□ -0.63
LIMS2-213ENST00000469300 CHD9Q3L8U1 2897 aa11.13□□□□□ -0.63
LIMS2-213ENST00000469300 TRBV27A0A0K0K1C4 114 aa11.13□□□□□ -0.63
LIMS2-213ENST00000469300 MIR7-3HGQ8N6C7 128 aa11.13□□□□□ -0.63
LIMS2-213ENST00000469300 WFDC9Q8NEX5 89 aa11.13□□□□□ -0.63
LIMS2-213ENST00000469300 POLQO75417 2590 aa11.13□□□□□ -0.63
LIMS2-213ENST00000469300 CRYGDP07320 174 aa11.13□□□□□ -0.63
LIMS2-213ENST00000469300 CLEC2BQ92478 149 aa11.13□□□□□ -0.63
LIMS2-213ENST00000469300 ATG2AQ2TAZ0 1938 aa11.13□□□□□ -0.63
LIMS2-213ENST00000469300 C20orf197Q8N268 126 aa11.13□□□□□ -0.63
LIMS2-213ENST00000469300 FN1P02751 2386 aaKnown RBP11.13□□□□□ -0.63
LIMS2-213ENST00000469300 FAM240AA0A1B0GVK7 77 aa11.12□□□□□ -0.63
LIMS2-213ENST00000469300 LINC00467Q9BRT7 94 aa11.12□□□□□ -0.63
LIMS2-213ENST00000469300 IGHV4-4A0A075B6R2 117 aa11.12□□□□□ -0.63
LIMS2-213ENST00000469300 PYGO1Q9Y3Y4 419 aa11.12□□□□□ -0.63
LIMS2-213ENST00000469300 U3KQK5 164 aa11.12□□□□□ -0.63
LIMS2-213ENST00000469300 IGLV1-51P01701 117 aa11.11□□□□□ -0.63
LIMS2-213ENST00000469300 RNASE3P12724 160 aaKnown RBP11.11□□□□□ -0.63
LIMS2-213ENST00000469300 UBE2AP49459 152 aa11.11□□□□□ -0.63
LIMS2-213ENST00000469300 CHCHD10Q8WYQ3 142 aaPredicted RBP11.11□□□□□ -0.63
LIMS2-213ENST00000469300 DIRC1Q969H9 104 aa11.11□□□□□ -0.63
LIMS2-213ENST00000469300 C9orf85Q96MD7 179 aa11.11□□□□□ -0.63
LIMS2-213ENST00000469300 CEMP1Q6PRD7 247 aaPredicted RBP11.11□□□□□ -0.63
LIMS2-213ENST00000469300 SMR3AQ99954 134 aa11.11□□□□□ -0.63
LIMS2-213ENST00000469300 TEX49A0A1B0GTD5 131 aa11.11□□□□□ -0.63
LIMS2-213ENST00000469300 IMUPQ9GZP8 106 aa11.11□□□□□ -0.63
LIMS2-213ENST00000469300 A0A0U1RQV1 116 aa11.11□□□□□ -0.63
LIMS2-213ENST00000469300 FAM110AQ9BQ89 295 aa11.11□□□□□ -0.63
LIMS2-213ENST00000469300 MP68P56378 58 aa11.1□□□□□ -0.63
LIMS2-213ENST00000469300 IGLV4-3A0A075B6K6 122 aa11.1□□□□□ -0.63
LIMS2-213ENST00000469300 DEFB105AQ8NG35 78 aa11.09□□□□□ -0.63
LIMS2-213ENST00000469300 DOPEY1Q5JWR5 2465 aa11.09□□□□□ -0.63
LIMS2-213ENST00000469300 MTORP42345 2549 aa11.09□□□□□ -0.63
LIMS2-213ENST00000469300 PKD1L2Q7Z442 2459 aa11.09□□□□□ -0.63
LIMS2-213ENST00000469300 CPAMD8Q8IZJ3 1885 aa11.09□□□□□ -0.63
LIMS2-213ENST00000469300 RNF185Q96GF1 192 aa11.09□□□□□ -0.63
LIMS2-213ENST00000469300 MIAQ16674 131 aa11.09□□□□□ -0.63
LIMS2-213ENST00000469300 ODF3L2Q3SX64 289 aa11.09□□□□□ -0.63
LIMS2-213ENST00000469300 NDUFC2-KCTD14E9PQ53 114 aa11.08□□□□□ -0.64
LIMS2-213ENST00000469300 M0QXV9 152 aa11.08□□□□□ -0.64
LIMS2-213ENST00000469300 CCDC179H3BU77 68 aa11.08□□□□□ -0.64
LIMS2-213ENST00000469300 NFE4Q86UQ8 179 aa11.08□□□□□ -0.64
LIMS2-213ENST00000469300 EXPH5Q8NEV8 1989 aa11.08□□□□□ -0.64
LIMS2-213ENST00000469300 LECT2O14960 151 aa11.07□□□□□ -0.64
LIMS2-213ENST00000469300 MRPS12O15235 138 aaKnown RBP11.07□□□□□ -0.64
LIMS2-213ENST00000469300 CNFNQ9BYD5 112 aa11.07□□□□□ -0.64
LIMS2-213ENST00000469300 LELP1Q5T871 98 aa11.07□□□□□ -0.64
LIMS2-213ENST00000469300 CFAP54Q96N23 3096 aa11.07□□□□□ -0.64
LIMS2-213ENST00000469300 XGP55808 180 aa11.07□□□□□ -0.64
LIMS2-213ENST00000469300 DAND5Q8N907 189 aa11.07□□□□□ -0.64
LIMS2-213ENST00000469300 IGHV4-30-4P0DP06 118 aa11.07□□□□□ -0.64
LIMS2-213ENST00000469300 CDKN2A-AS1Q9UH64 79 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms