RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 TMEM86BQ8N661 226 aa9.03□□□□□ -0.96
LINC00959-201ENST00000456581 PEMTQ9UBM1 199 aa9.03□□□□□ -0.96
LINC00959-201ENST00000456581 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.02□□□□□ -0.97
LINC00959-201ENST00000456581 IGKV2-29A2NJV5 120 aaPredicted RBP9.02□□□□□ -0.97
LINC00959-201ENST00000456581 A8MWV9 139 aa9.02□□□□□ -0.97
LINC00959-201ENST00000456581 NSUN5P1Q3KNT7 163 aa9.02□□□□□ -0.97
LINC00959-201ENST00000456581 I3L3M4 83 aa9.02□□□□□ -0.97
LINC00959-201ENST00000456581 LEPROTO15243 131 aa9.02□□□□□ -0.97
LINC00959-201ENST00000456581 IGHV3-30-3P0DP02 117 aa9.02□□□□□ -0.97
LINC00959-201ENST00000456581 DEFB114Q30KQ6 69 aa9.02□□□□□ -0.97
LINC00959-201ENST00000456581 PPDPFLQ8WWR9 84 aa9.02□□□□□ -0.97
LINC00959-201ENST00000456581 ODF3Q96PU9 254 aa9.02□□□□□ -0.97
LINC00959-201ENST00000456581 TEP1Q99973 2627 aaKnown RBP9.02□□□□□ -0.97
LINC00959-201ENST00000456581 A0A0J9YXY3 114 aa9.01□□□□□ -0.97
LINC00959-201ENST00000456581 SLC25A20O43772 301 aa9.01□□□□□ -0.97
LINC00959-201ENST00000456581 NTN5Q8WTR8 489 aaPredicted RBP9.01□□□□□ -0.97
LINC00959-201ENST00000456581 H3BMM0 161 aa9□□□□□ -0.97
LINC00959-201ENST00000456581 CCL24O00175 119 aa9□□□□□ -0.97
LINC00959-201ENST00000456581 TRBV20-1A0A075B6N2 111 aa9□□□□□ -0.97
LINC00959-201ENST00000456581 TRAV4A0A0B4J268 109 aa9□□□□□ -0.97
LINC00959-201ENST00000456581 A0A0U1RRA0 63 aa9□□□□□ -0.97
LINC00959-201ENST00000456581 ATP6V0E2Q8NHE4 81 aa9□□□□□ -0.97
LINC00959-201ENST00000456581 MAP6D1Q9H9H5 199 aa9□□□□□ -0.97
LINC00959-201ENST00000456581 ERG28Q9UKR5 140 aa9□□□□□ -0.97
LINC00959-201ENST00000456581 TRRAPQ9Y4A5 3859 aa9□□□□□ -0.97
LINC00959-201ENST00000456581 CLEC2BQ92478 149 aa8.99□□□□□ -0.97
LINC00959-201ENST00000456581 TRIAP1O43715 76 aa8.99□□□□□ -0.97
LINC00959-201ENST00000456581 SBSPONQ8IVN8 264 aa8.99□□□□□ -0.97
LINC00959-201ENST00000456581 LITAFQ99732 161 aa8.99□□□□□ -0.97
LINC00959-201ENST00000456581 TIMM21Q9BVV7 248 aa8.99□□□□□ -0.97
LINC00959-201ENST00000456581 F8P00451 2351 aa8.98□□□□□ -0.97
LINC00959-201ENST00000456581 RHOHQ15669 191 aa8.98□□□□□ -0.97
LINC00959-201ENST00000456581 TEX29Q8N6K0 151 aa8.98□□□□□ -0.97
LINC00959-201ENST00000456581 NHLRC4P0CG21 123 aaPredicted RBP8.98□□□□□ -0.97
LINC00959-201ENST00000456581 SS18L2Q9UHA2 77 aa8.98□□□□□ -0.97
LINC00959-201ENST00000456581 RNASE1P07998 156 aaKnown RBP8.97□□□□□ -0.97
LINC00959-201ENST00000456581 ODF3L2Q3SX64 289 aa8.97□□□□□ -0.97
LINC00959-201ENST00000456581 ZNF625Q96I27 306 aaPredicted RBP8.97□□□□□ -0.97
LINC00959-201ENST00000456581 M0R2P5 195 aa8.97□□□□□ -0.97
LINC00959-201ENST00000456581 NDUFA7O95182 113 aa8.97□□□□□ -0.97
LINC00959-201ENST00000456581 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.97□□□□□ -0.97
LINC00959-201ENST00000456581 LINC00467Q9BRT7 94 aa8.97□□□□□ -0.97
LINC00959-201ENST00000456581 LY6G6DO95868 133 aa8.96□□□□□ -0.97
LINC00959-201ENST00000456581 WFDC10AQ9H1F0 79 aa8.96□□□□□ -0.97
LINC00959-201ENST00000456581 XCL2Q9UBD3 114 aa8.96□□□□□ -0.97
LINC00959-201ENST00000456581 LYRM7Q5U5X0 104 aa8.96□□□□□ -0.98
LINC00959-201ENST00000456581 TNFRSF18Q9Y5U5 241 aa8.96□□□□□ -0.98
LINC00959-201ENST00000456581 TRGV11A0A075B6L2 103 aa8.95□□□□□ -0.98
LINC00959-201ENST00000456581 NDUFA12Q9UI09 145 aa8.95□□□□□ -0.98
LINC00959-201ENST00000456581 IGHV3OR16-12A0A075B7B8 117 aa8.95□□□□□ -0.98
LINC00959-201ENST00000456581 LINC01587Q99440 93 aa8.95□□□□□ -0.98
LINC00959-201ENST00000456581 ANAPC13Q9BS18 74 aa8.95□□□□□ -0.98
LINC00959-201ENST00000456581 CHCHD7Q9BUK0 85 aa8.95□□□□□ -0.98
LINC00959-201ENST00000456581 HILS1P60008 231 aa8.94□□□□□ -0.98
LINC00959-201ENST00000456581 LINC01620Q4KN68 170 aa8.94□□□□□ -0.98
LINC00959-201ENST00000456581 C3orf56Q8N813 242 aa8.94□□□□□ -0.98
LINC00959-201ENST00000456581 A0A0B4J2C4 111 aa8.94□□□□□ -0.98
LINC00959-201ENST00000456581 B5MCH6 92 aa8.94□□□□□ -0.98
LINC00959-201ENST00000456581 KRTAP10-3P60369 221 aa8.93□□□□□ -0.98
LINC00959-201ENST00000456581 MRPS36P82909 103 aaKnown RBP8.93□□□□□ -0.98
LINC00959-201ENST00000456581 CDKN2A-AS1Q9UH64 79 aa8.93□□□□□ -0.98
LINC00959-201ENST00000456581 COX6A2Q02221 97 aa8.93□□□□□ -0.98
LINC00959-201ENST00000456581 TTC32Q5I0X7 151 aa8.93□□□□□ -0.98
LINC00959-201ENST00000456581 CITED1Q99966 193 aa8.93□□□□□ -0.98
LINC00959-201ENST00000456581 UBE2D4Q9Y2X8 147 aa8.93□□□□□ -0.98
LINC00959-201ENST00000456581 INAFM1C9JVW0 142 aa8.92□□□□□ -0.98
LINC00959-201ENST00000456581 IGHV1-58A0A0C4DH39 117 aa8.92□□□□□ -0.98
LINC00959-201ENST00000456581 CCDC179H3BU77 68 aa8.92□□□□□ -0.98
LINC00959-201ENST00000456581 IGHV3-53P01767 116 aa8.92□□□□□ -0.98
LINC00959-201ENST00000456581 VSIG2Q96IQ7 327 aa8.92□□□□□ -0.98
LINC00959-201ENST00000456581 A8MTW9 85 aa8.91□□□□□ -0.98
LINC00959-201ENST00000456581 H7C423 109 aa8.91□□□□□ -0.98
LINC00959-201ENST00000456581 STHQ8IWL8 128 aa8.91□□□□□ -0.98
LINC00959-201ENST00000456581 C16orf95Q9H693 158 aa8.91□□□□□ -0.98
LINC00959-201ENST00000456581 ICOSQ9Y6W8 199 aa8.91□□□□□ -0.98
LINC00959-201ENST00000456581 LINC00694P0DN24 101 aa8.9□□□□□ -0.98
LINC00959-201ENST00000456581 ATXN8Q156A1 80 aa8.9□□□□□ -0.98
LINC00959-201ENST00000456581 SPATA3Q8NHX4 192 aa8.9□□□□□ -0.98
LINC00959-201ENST00000456581 ZFAND6Q6FIF0 208 aa8.9□□□□□ -0.99
LINC00959-201ENST00000456581 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.89□□□□□ -0.99
LINC00959-201ENST00000456581 INSP01308 110 aa8.89□□□□□ -0.99
LINC00959-201ENST00000456581 RPL13AP40429 203 aaKnown RBP8.89□□□□□ -0.99
LINC00959-201ENST00000456581 ZNF415Q09FC8 603 aa8.89□□□□□ -0.99
LINC00959-201ENST00000456581 PYGO1Q9Y3Y4 419 aa8.89□□□□□ -0.99
LINC00959-201ENST00000456581 MIAQ16674 131 aa8.88□□□□□ -0.99
LINC00959-201ENST00000456581 C2orf82Q6UX34 121 aa8.88□□□□□ -0.99
LINC00959-201ENST00000456581 C1orf158Q8N1D5 194 aa8.88□□□□□ -0.99
LINC00959-201ENST00000456581 C15orf53Q8NAA6 179 aa8.88□□□□□ -0.99
LINC00959-201ENST00000456581 C11orf72Q8NBR9 251 aa8.88□□□□□ -0.99
LINC00959-201ENST00000456581 TMEM101Q96IK0 257 aa8.88□□□□□ -0.99
LINC00959-201ENST00000456581 TRAV13-1A0A0B4J241 112 aa8.87□□□□□ -0.99
LINC00959-201ENST00000456581 RPL35AP18077 110 aaKnown RBP8.87□□□□□ -0.99
LINC00959-201ENST00000456581 STAB1Q9NY15 2570 aa8.87□□□□□ -0.99
LINC00959-201ENST00000456581 TRAV25A0A0B4J276 109 aa8.87□□□□□ -0.99
LINC00959-201ENST00000456581 TRBV30A0A0K0K1B3 111 aa8.87□□□□□ -0.99
LINC00959-201ENST00000456581 TINCRA0A1B0GVN0 87 aa8.86□□□□□ -0.99
LINC00959-201ENST00000456581 GAGE5Q13069 117 aa8.86□□□□□ -0.99
LINC00959-201ENST00000456581 GAGE6Q13070 117 aa8.86□□□□□ -0.99
LINC00959-201ENST00000456581 TRBV10-2A0A0K0K1G8 114 aa8.86□□□□□ -0.99
LINC00959-201ENST00000456581 SNCGO76070 127 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 262.3 ms