RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 PARLQ9H300 379 aa4.7□□□□□ -1.66
HDAC9-216ENST00000446646 PPDPFQ9H3Y8 114 aa4.7□□□□□ -1.66
HDAC9-216ENST00000446646 HHLA3Q9XRX5 114 aa4.7□□□□□ -1.66
HDAC9-216ENST00000446646 LY96Q9Y6Y9 160 aa4.7□□□□□ -1.66
HDAC9-216ENST00000446646 TMSB15BA0A087X1C1 80 aa4.69□□□□□ -1.66
HDAC9-216ENST00000446646 ZNF727A8MUV8 499 aa4.69□□□□□ -1.66
HDAC9-216ENST00000446646 ARMS2P0C7Q2 107 aa4.69□□□□□ -1.66
HDAC9-216ENST00000446646 RNASE3P12724 160 aaKnown RBP4.69□□□□□ -1.66
HDAC9-216ENST00000446646 SRIP30626 198 aa4.69□□□□□ -1.66
HDAC9-216ENST00000446646 RHEBQ15382 184 aa4.69□□□□□ -1.66
HDAC9-216ENST00000446646 ZFP2Q6ZN57 461 aa4.69□□□□□ -1.66
HDAC9-216ENST00000446646 Q6ZSA8 131 aa4.69□□□□□ -1.66
HDAC9-216ENST00000446646 C15orf54Q8N8G6 183 aa4.69□□□□□ -1.66
HDAC9-216ENST00000446646 BORCS7Q96B45 105 aa4.69□□□□□ -1.66
HDAC9-216ENST00000446646 AP1S3Q96PC3 154 aa4.69□□□□□ -1.66
HDAC9-216ENST00000446646 CARHSP1Q9Y2V2 147 aaKnown RBP4.69□□□□□ -1.66
HDAC9-216ENST00000446646 TMEM218A2RU14 115 aa4.68□□□□□ -1.66
HDAC9-216ENST00000446646 GRIFINA4D1Z8 144 aa4.68□□□□□ -1.66
HDAC9-216ENST00000446646 LRCOL1A6NCL2 159 aa4.68□□□□□ -1.66
HDAC9-216ENST00000446646 C1orf196B1AJZ1 125 aa4.68□□□□□ -1.66
HDAC9-216ENST00000446646 F2Z2F3 143 aa4.68□□□□□ -1.66
HDAC9-216ENST00000446646 M0R381 172 aa4.68□□□□□ -1.66
HDAC9-216ENST00000446646 OR5AL1P0C617 328 aa4.68□□□□□ -1.66
HDAC9-216ENST00000446646 SFTA3P0C7M3 94 aa4.68□□□□□ -1.66
HDAC9-216ENST00000446646 TRGC1P0CF51 173 aa4.68□□□□□ -1.66
HDAC9-216ENST00000446646 S100A2P29034 98 aa4.68□□□□□ -1.66
HDAC9-216ENST00000446646 CRIP1P50238 77 aa4.68□□□□□ -1.66
HDAC9-216ENST00000446646 CACNG7P62955 275 aa4.68□□□□□ -1.66
HDAC9-216ENST00000446646 COL5A1-AS1Q5SY13 56 aa4.68□□□□□ -1.66
HDAC9-216ENST00000446646 FAM74A4Q5TZK3 123 aa4.68□□□□□ -1.66
HDAC9-216ENST00000446646 SUMO4Q6EEV6 95 aa4.68□□□□□ -1.66
HDAC9-216ENST00000446646 FAM231DQ6ZW35 169 aa4.68□□□□□ -1.66
HDAC9-216ENST00000446646 SCXQ7RTU7 201 aa4.68□□□□□ -1.66
HDAC9-216ENST00000446646 NEGR1Q7Z3B1 354 aa4.68□□□□□ -1.66
HDAC9-216ENST00000446646 FER1L6-AS1Q8NA97 138 aa4.68□□□□□ -1.66
HDAC9-216ENST00000446646 CST9LQ9H4G1 147 aa4.68□□□□□ -1.66
HDAC9-216ENST00000446646 RPP21Q9H633 154 aaKnown RBP4.68□□□□□ -1.66
HDAC9-216ENST00000446646 TRBV6-4A0A1B0GX49 114 aa4.67□□□□□ -1.66
HDAC9-216ENST00000446646 A8MWL6 223 aa4.67□□□□□ -1.66
HDAC9-216ENST00000446646 J3KT08 172 aa4.67□□□□□ -1.66
HDAC9-216ENST00000446646 K7EQD1 137 aa4.67□□□□□ -1.66
HDAC9-216ENST00000446646 CFAP126Q5VTH2 177 aa4.67□□□□□ -1.66
HDAC9-216ENST00000446646 TM2D2Q9BX73 214 aa4.67□□□□□ -1.66
HDAC9-216ENST00000446646 NAT8Q9UHE5 227 aa4.67□□□□□ -1.66
HDAC9-216ENST00000446646 ERG28Q9UKR5 140 aa4.67□□□□□ -1.66
HDAC9-216ENST00000446646 TRBV20OR9-2A0A075B6H5 130 aa4.66□□□□□ -1.66
HDAC9-216ENST00000446646 A0A096LPF7 62 aa4.66□□□□□ -1.66
HDAC9-216ENST00000446646 A0A1B0GX51 115 aa4.66□□□□□ -1.66
HDAC9-216ENST00000446646 C19orf71A6NCJ1 209 aa4.66□□□□□ -1.66
HDAC9-216ENST00000446646 H7C1H1 209 aa4.66□□□□□ -1.66
HDAC9-216ENST00000446646 NXPH4O95158 308 aa4.66□□□□□ -1.66
HDAC9-216ENST00000446646 IGLV2-8P01709 118 aa4.66□□□□□ -1.66
HDAC9-216ENST00000446646 SRP19P09132 144 aaKnown RBP4.66□□□□□ -1.66
HDAC9-216ENST00000446646 RPL24P83731 157 aaKnown RBP4.66□□□□□ -1.66
HDAC9-216ENST00000446646 ZNF56Q15929 161 aa4.66□□□□□ -1.66
HDAC9-216ENST00000446646 TMEM241Q24JQ0 296 aa4.66□□□□□ -1.66
HDAC9-216ENST00000446646 CLLU1Q5K131 121 aa4.66□□□□□ -1.66
HDAC9-216ENST00000446646 PRR26Q8N8Z3 221 aa4.66□□□□□ -1.66
HDAC9-216ENST00000446646 VSIG2Q96IQ7 327 aa4.66□□□□□ -1.66
HDAC9-216ENST00000446646 A0A087WX48 190 aa4.65□□□□□ -1.67
HDAC9-216ENST00000446646 IGHV3-73A0A0B4J1V6 119 aa4.65□□□□□ -1.67
HDAC9-216ENST00000446646 TRBV10-1A0A0K0K1A3 114 aa4.65□□□□□ -1.67
HDAC9-216ENST00000446646 ESDP10768 282 aa4.65□□□□□ -1.67
HDAC9-216ENST00000446646 RAB5AP20339 215 aa4.65□□□□□ -1.67
HDAC9-216ENST00000446646 SMAGPQ0VAQ4 97 aa4.65□□□□□ -1.67
HDAC9-216ENST00000446646 WFDC2Q14508 124 aa4.65□□□□□ -1.67
HDAC9-216ENST00000446646 ADIRFQ15847 76 aa4.65□□□□□ -1.67
HDAC9-216ENST00000446646 SLC25A29Q8N8R3 303 aa4.65□□□□□ -1.67
HDAC9-216ENST00000446646 OR5A1Q8NGJ0 315 aa4.65□□□□□ -1.67
HDAC9-216ENST00000446646 OR10AG1Q8NH19 301 aa4.65□□□□□ -1.67
HDAC9-216ENST00000446646 SNHG12Q9BXW3 62 aa4.65□□□□□ -1.67
HDAC9-216ENST00000446646 GFRA4Q9GZZ7 299 aa4.65□□□□□ -1.67
HDAC9-216ENST00000446646 RNASE7Q9H1E1 156 aaKnown RBP4.65□□□□□ -1.67
HDAC9-216ENST00000446646 OSTCQ9NRP0 149 aa4.65□□□□□ -1.67
HDAC9-216ENST00000446646 Q9UF83 564 aa4.65□□□□□ -1.67
HDAC9-216ENST00000446646 TRAV9-2A0A087WT02 112 aa4.64□□□□□ -1.67
HDAC9-216ENST00000446646 TRAV8-6A0A0B4J262 113 aa4.64□□□□□ -1.67
HDAC9-216ENST00000446646 MGPP08493 103 aa4.64□□□□□ -1.67
HDAC9-216ENST00000446646 IGLC6P0CF74 106 aa4.64□□□□□ -1.67
HDAC9-216ENST00000446646 CTRLP40313 264 aa4.64□□□□□ -1.67
HDAC9-216ENST00000446646 RPS28P62857 69 aaKnown RBP4.64□□□□□ -1.67
HDAC9-216ENST00000446646 RPL36AP83881 106 aaKnown RBP4.64□□□□□ -1.67
HDAC9-216ENST00000446646 RPL18AQ02543 176 aaKnown RBP4.64□□□□□ -1.67
HDAC9-216ENST00000446646 LYZL1Q6UWQ5 148 aa4.64□□□□□ -1.67
HDAC9-216ENST00000446646 Q8N814 137 aa4.64□□□□□ -1.67
HDAC9-216ENST00000446646 RPL36ALQ969Q0 106 aaKnown RBP4.64□□□□□ -1.67
HDAC9-216ENST00000446646 A0A087WWC5 75 aa4.63□□□□□ -1.67
HDAC9-216ENST00000446646 A0A0U1RQV1 116 aa4.63□□□□□ -1.67
HDAC9-216ENST00000446646 GZMBP10144 247 aa4.63□□□□□ -1.67
HDAC9-216ENST00000446646 EVI2AP22794 236 aa4.63□□□□□ -1.67
HDAC9-216ENST00000446646 AMTP48728 403 aa4.63□□□□□ -1.67
HDAC9-216ENST00000446646 TWIST1Q15672 202 aa4.63□□□□□ -1.67
HDAC9-216ENST00000446646 LINC01561Q8N1V8 128 aa4.63□□□□□ -1.67
HDAC9-216ENST00000446646 C10orf126Q8N4M7 172 aa4.63□□□□□ -1.67
HDAC9-216ENST00000446646 C14orf178Q8N769 122 aaPredicted RBP4.63□□□□□ -1.67
HDAC9-216ENST00000446646 OR10G8Q8NGN5 311 aa4.63□□□□□ -1.67
HDAC9-216ENST00000446646 ATP6V0E2Q8NHE4 81 aa4.63□□□□□ -1.67
HDAC9-216ENST00000446646 TSKUQ8WUA8 353 aa4.63□□□□□ -1.67
HDAC9-216ENST00000446646 DPH3P1Q9H4G8 78 aa4.63□□□□□ -1.67
HDAC9-216ENST00000446646 MSRB1Q9NZV6 116 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms