RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 Q6ZTI0 123 aa13.33□□□□□ -0.28
CHD1L-204ENST00000431239 LITAFQ99732 161 aa13.33□□□□□ -0.28
CHD1L-204ENST00000431239 CITED2Q99967 270 aaPredicted RBP13.33□□□□□ -0.28
CHD1L-204ENST00000431239 CDKN2A-AS1Q9UH64 79 aa13.33□□□□□ -0.28
CHD1L-204ENST00000431239 BEAN1Q3B7T3 259 aa13.33□□□□□ -0.28
CHD1L-204ENST00000431239 TINCRA0A1B0GVN0 87 aa13.32□□□□□ -0.28
CHD1L-204ENST00000431239 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.32□□□□□ -0.28
CHD1L-204ENST00000431239 TRBV20-1A0A075B6N2 111 aa13.31□□□□□ -0.28
CHD1L-204ENST00000431239 PIK3CD-AS1Q5SR53 167 aa13.31□□□□□ -0.28
CHD1L-204ENST00000431239 C9JAW5 83 aa13.31□□□□□ -0.28
CHD1L-204ENST00000431239 LINC00694P0DN24 101 aa13.31□□□□□ -0.28
CHD1L-204ENST00000431239 SPATA25Q9BR10 227 aa13.3□□□□□ -0.28
CHD1L-204ENST00000431239 A0A0B4J2C4 111 aa13.3□□□□□ -0.28
CHD1L-204ENST00000431239 COX6A2Q02221 97 aa13.29□□□□□ -0.28
CHD1L-204ENST00000431239 CRYBA4P53673 196 aa13.29□□□□□ -0.28
CHD1L-204ENST00000431239 FHL3Q13643 280 aa13.29□□□□□ -0.28
CHD1L-204ENST00000431239 ANKRD29Q8N6D5 301 aa13.29□□□□□ -0.28
CHD1L-204ENST00000431239 ZNF625Q96I27 306 aaPredicted RBP13.29□□□□□ -0.28
CHD1L-204ENST00000431239 DNAJC30Q96LL9 226 aa13.29□□□□□ -0.28
CHD1L-204ENST00000431239 CARD19Q96LW7 228 aa13.29□□□□□ -0.28
CHD1L-204ENST00000431239 FN1P02751 2386 aaKnown RBP13.29□□□□□ -0.28
CHD1L-204ENST00000431239 A0A0U1RRA0 63 aa13.29□□□□□ -0.28
CHD1L-204ENST00000431239 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.28□□□□□ -0.28
CHD1L-204ENST00000431239 TEN1Q86WV5 123 aa13.28□□□□□ -0.28
CHD1L-204ENST00000431239 NOP10Q9NPE3 64 aaKnown RBP13.28□□□□□ -0.28
CHD1L-204ENST00000431239 TRAV13-1A0A0B4J241 112 aa13.27□□□□□ -0.28
CHD1L-204ENST00000431239 GAGE12JA6NER3 117 aa13.27□□□□□ -0.28
CHD1L-204ENST00000431239 RPL35AP18077 110 aaKnown RBP13.27□□□□□ -0.28
CHD1L-204ENST00000431239 GAGE4Q13068 117 aa13.27□□□□□ -0.28
CHD1L-204ENST00000431239 GAGE5Q13069 117 aa13.27□□□□□ -0.28
CHD1L-204ENST00000431239 SLC25A20O43772 301 aa13.26□□□□□ -0.29
CHD1L-204ENST00000431239 TMEM86BQ8N661 226 aa13.26□□□□□ -0.29
CHD1L-204ENST00000431239 ATP6V0E2Q8NHE4 81 aa13.26□□□□□ -0.29
CHD1L-204ENST00000431239 PDZD2O15018 2839 aa13.26□□□□□ -0.29
CHD1L-204ENST00000431239 TRIAP1O43715 76 aa13.26□□□□□ -0.29
CHD1L-204ENST00000431239 TMEM101Q96IK0 257 aa13.26□□□□□ -0.29
CHD1L-204ENST00000431239 PPDPFLQ8WWR9 84 aa13.25□□□□□ -0.29
CHD1L-204ENST00000431239 GCN1Q92616 2671 aaKnown RBP13.25□□□□□ -0.29
CHD1L-204ENST00000431239 HELZ2Q9BYK8 2649 aaKnown RBP13.25□□□□□ -0.29
CHD1L-204ENST00000431239 K7EQD1 137 aa13.25□□□□□ -0.29
CHD1L-204ENST00000431239 PLA2G2AP14555 144 aa13.25□□□□□ -0.29
CHD1L-204ENST00000431239 MIAQ16674 131 aa13.25□□□□□ -0.29
CHD1L-204ENST00000431239 ZFAND6Q6FIF0 208 aa13.25□□□□□ -0.29
CHD1L-204ENST00000431239 RPL36AP83881 106 aaKnown RBP13.24□□□□□ -0.29
CHD1L-204ENST00000431239 NTM-AS1Q6ZSK4 140 aa13.24□□□□□ -0.29
CHD1L-204ENST00000431239 RPL36ALQ969Q0 106 aaKnown RBP13.24□□□□□ -0.29
CHD1L-204ENST00000431239 CDIP1Q9H305 208 aa13.24□□□□□ -0.29
CHD1L-204ENST00000431239 NBEAL2Q6ZNJ1 2754 aa13.24□□□□□ -0.29
CHD1L-204ENST00000431239 TRAV25A0A0B4J276 109 aa13.23□□□□□ -0.29
CHD1L-204ENST00000431239 IL17DQ8TAD2 202 aa13.23□□□□□ -0.29
CHD1L-204ENST00000431239 LINC01006Q8NI28 216 aa13.23□□□□□ -0.29
CHD1L-204ENST00000431239 YAE1D1Q9NRH1 226 aa13.23□□□□□ -0.29
CHD1L-204ENST00000431239 GAGE7O76087 117 aa13.23□□□□□ -0.29
CHD1L-204ENST00000431239 GAGE12FP0CL80 117 aa13.23□□□□□ -0.29
CHD1L-204ENST00000431239 GAGE12GP0CL81 117 aa13.23□□□□□ -0.29
CHD1L-204ENST00000431239 GAGE12IP0CL82 117 aa13.23□□□□□ -0.29
CHD1L-204ENST00000431239 LINC00242Q5T6M2 205 aa13.23□□□□□ -0.29
CHD1L-204ENST00000431239 LOC100131303A0A0U1RQF7 123 aa13.22□□□□□ -0.29
CHD1L-204ENST00000431239 SPANXDQ9BXN6 97 aa13.22□□□□□ -0.29
CHD1L-204ENST00000431239 Q9H8V8 135 aa13.22□□□□□ -0.29
CHD1L-204ENST00000431239 SPANXCQ9NY87 97 aa13.22□□□□□ -0.29
CHD1L-204ENST00000431239 SBSPONQ8IVN8 264 aa13.22□□□□□ -0.29
CHD1L-204ENST00000431239 TRGV2A0A075B6R0 118 aa13.21□□□□□ -0.29
CHD1L-204ENST00000431239 GIG44P09565 113 aaPredicted RBP13.21□□□□□ -0.29
CHD1L-204ENST00000431239 ICOSQ9Y6W8 199 aa13.2□□□□□ -0.3
CHD1L-204ENST00000431239 FASNP49327 2511 aaKnown RBP13.2□□□□□ -0.3
CHD1L-204ENST00000431239 CLUHP3Q96NS8 147 aa13.2□□□□□ -0.3
CHD1L-204ENST00000431239 NOTCH2Q04721 2471 aa13.19□□□□□ -0.3
CHD1L-204ENST00000431239 MT-ATP8P03928 68 aa13.19□□□□□ -0.3
CHD1L-204ENST00000431239 ATXN8Q156A1 80 aa13.19□□□□□ -0.3
CHD1L-204ENST00000431239 LINC01620Q4KN68 170 aa13.19□□□□□ -0.3
CHD1L-204ENST00000431239 CLEC2BQ92478 149 aa13.19□□□□□ -0.3
CHD1L-204ENST00000431239 UNC79Q9P2D8 2635 aa13.19□□□□□ -0.3
CHD1L-204ENST00000431239 TIRAPP58753 221 aa13.19□□□□□ -0.3
CHD1L-204ENST00000431239 IGLV5-45A0A087WSX0 123 aa13.18□□□□□ -0.3
CHD1L-204ENST00000431239 TRAV4A0A0B4J268 109 aa13.18□□□□□ -0.3
CHD1L-204ENST00000431239 IGKV3OR2-268A0A0C4DH90 116 aa13.18□□□□□ -0.3
CHD1L-204ENST00000431239 RPL13AP40429 203 aaKnown RBP13.18□□□□□ -0.3
CHD1L-204ENST00000431239 XGP55808 180 aa13.18□□□□□ -0.3
CHD1L-204ENST00000431239 NTN5Q8WTR8 489 aaPredicted RBP13.18□□□□□ -0.3
CHD1L-204ENST00000431239 NDUFA1O15239 70 aa13.18□□□□□ -0.3
CHD1L-204ENST00000431239 HERVK_113P63121 156 aa13.18□□□□□ -0.3
CHD1L-204ENST00000431239 TRBV30A0A0K0K1B3 111 aa13.17□□□□□ -0.3
CHD1L-204ENST00000431239 KRTAP1-1Q07627 177 aa13.16□□□□□ -0.3
CHD1L-204ENST00000431239 DAZ2Q13117 558 aaKnown RBP13.16□□□□□ -0.3
CHD1L-204ENST00000431239 DAZ4Q86SG3 579 aaKnown RBP13.16□□□□□ -0.3
CHD1L-204ENST00000431239 DAZ3Q9NR90 486 aaKnown RBP13.16□□□□□ -0.3
CHD1L-204ENST00000431239 SMIM1B2RUZ4 78 aa13.16□□□□□ -0.3
CHD1L-204ENST00000431239 UBE2L6O14933 153 aa13.16□□□□□ -0.3
CHD1L-204ENST00000431239 ANK3Q12955 4377 aaKnown RBP13.16□□□□□ -0.3
CHD1L-204ENST00000431239 VWFP04275 2813 aa13.16□□□□□ -0.3
CHD1L-204ENST00000431239 TRBV10-1A0A0K0K1A3 114 aa13.16□□□□□ -0.3
CHD1L-204ENST00000431239 HIVEP2P31629 2446 aa13.15□□□□□ -0.3
CHD1L-204ENST00000431239 PLAC8L1A1L4L8 177 aa13.15□□□□□ -0.3
CHD1L-204ENST00000431239 TEX49A0A1B0GTD5 131 aa13.15□□□□□ -0.3
CHD1L-204ENST00000431239 PRIMA1Q86XR5 153 aa13.14□□□□□ -0.31
CHD1L-204ENST00000431239 TEX29Q8N6K0 151 aa13.14□□□□□ -0.31
CHD1L-204ENST00000431239 CDC42SE2Q9NRR3 84 aa13.14□□□□□ -0.31
CHD1L-204ENST00000431239 CIRBPQ14011 172 aaKnown RBP13.14□□□□□ -0.31
CHD1L-204ENST00000431239 MEIG1Q5JSS6 88 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms