RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 INAFM1C9JVW0 142 aa9.86□□□□□ -0.83
CDCA3-202ENST00000422785 RRN3P1Q2M238 152 aa9.86□□□□□ -0.83
CDCA3-202ENST00000422785 RNASE13Q5GAN3 156 aaKnown RBP9.86□□□□□ -0.83
CDCA3-202ENST00000422785 OVOL2Q9BRP0 275 aa9.86□□□□□ -0.83
CDCA3-202ENST00000422785 OTOGQ6ZRI0 2925 aa9.85□□□□□ -0.83
CDCA3-202ENST00000422785 Q6ZUT4 128 aa9.85□□□□□ -0.83
CDCA3-202ENST00000422785 DAZ4Q86SG3 579 aaKnown RBP9.85□□□□□ -0.83
CDCA3-202ENST00000422785 DAZ3Q9NR90 486 aaKnown RBP9.85□□□□□ -0.83
CDCA3-202ENST00000422785 UBE2D3P61077 147 aa9.84□□□□□ -0.83
CDCA3-202ENST00000422785 UBE2D2P62837 147 aa9.84□□□□□ -0.83
CDCA3-202ENST00000422785 NOTCH3Q9UM47 2321 aa9.83□□□□□ -0.84
CDCA3-202ENST00000422785 IGHV3-64A0A075B6Q5 118 aa9.83□□□□□ -0.84
CDCA3-202ENST00000422785 IGHV3-30P01768 117 aa9.83□□□□□ -0.84
CDCA3-202ENST00000422785 IGHV3-30-5P0DP03 117 aa9.83□□□□□ -0.84
CDCA3-202ENST00000422785 UBE2D1P51668 147 aa9.83□□□□□ -0.84
CDCA3-202ENST00000422785 TRGV2A0A075B6R0 118 aa9.83□□□□□ -0.84
CDCA3-202ENST00000422785 GAGE7O76087 117 aa9.83□□□□□ -0.84
CDCA3-202ENST00000422785 GAGE12FP0CL80 117 aa9.83□□□□□ -0.84
CDCA3-202ENST00000422785 GAGE12GP0CL81 117 aa9.83□□□□□ -0.84
CDCA3-202ENST00000422785 GAGE12IP0CL82 117 aa9.83□□□□□ -0.84
CDCA3-202ENST00000422785 IGHV3-30-3P0DP02 117 aa9.82□□□□□ -0.84
CDCA3-202ENST00000422785 DGAT2L7PQ6IED9 249 aa9.82□□□□□ -0.84
CDCA3-202ENST00000422785 SS18L2Q9UHA2 77 aa9.82□□□□□ -0.84
CDCA3-202ENST00000422785 INSL3P51460 131 aa9.81□□□□□ -0.84
CDCA3-202ENST00000422785 NTM-AS1Q6ZSK4 140 aa9.81□□□□□ -0.84
CDCA3-202ENST00000422785 IGHV1-58A0A0C4DH39 117 aa9.81□□□□□ -0.84
CDCA3-202ENST00000422785 TRBV6-4A0A1B0GX49 114 aa9.81□□□□□ -0.84
CDCA3-202ENST00000422785 GAGE12JA6NER3 117 aa9.81□□□□□ -0.84
CDCA3-202ENST00000422785 GAGE4Q13068 117 aa9.81□□□□□ -0.84
CDCA3-202ENST00000422785 GAGE5Q13069 117 aa9.81□□□□□ -0.84
CDCA3-202ENST00000422785 GAGE13Q4V321 117 aa9.81□□□□□ -0.84
CDCA3-202ENST00000422785 CSDC2Q9Y534 153 aaKnown RBP9.81□□□□□ -0.84
CDCA3-202ENST00000422785 NSD1Q96L73 2696 aaPredicted RBP9.81□□□□□ -0.84
CDCA3-202ENST00000422785 GAGE12HA6NDE8 117 aa9.8□□□□□ -0.84
CDCA3-202ENST00000422785 GEMIN7Q9H840 131 aaKnown RBP9.8□□□□□ -0.84
CDCA3-202ENST00000422785 C2CD3Q4AC94 2353 aa9.8□□□□□ -0.84
CDCA3-202ENST00000422785 TIRAPP58753 221 aa9.8□□□□□ -0.84
CDCA3-202ENST00000422785 SBSPONQ8IVN8 264 aa9.8□□□□□ -0.84
CDCA3-202ENST00000422785 C10orf126Q8N4M7 172 aa9.8□□□□□ -0.84
CDCA3-202ENST00000422785 TRAV8-3A0A0A6YYJ7 113 aa9.8□□□□□ -0.84
CDCA3-202ENST00000422785 VSIG2Q96IQ7 327 aa9.8□□□□□ -0.84
CDCA3-202ENST00000422785 LINC00694P0DN24 101 aa9.79□□□□□ -0.84
CDCA3-202ENST00000422785 PGPEP1Q9NXJ5 209 aa9.79□□□□□ -0.84
CDCA3-202ENST00000422785 IGLV5-45A0A087WSX0 123 aa9.79□□□□□ -0.84
CDCA3-202ENST00000422785 C9orf66Q5T8R8 295 aa9.79□□□□□ -0.84
CDCA3-202ENST00000422785 A0A0J9YXY3 114 aa9.78□□□□□ -0.84
CDCA3-202ENST00000422785 TRGV4A0A0C4DH28 118 aa9.78□□□□□ -0.84
CDCA3-202ENST00000422785 FN1P02751 2386 aaKnown RBP9.78□□□□□ -0.84
CDCA3-202ENST00000422785 SPINK8P0C7L1 97 aa9.77□□□□□ -0.84
CDCA3-202ENST00000422785 APOMO95445 188 aa9.77□□□□□ -0.85
CDCA3-202ENST00000422785 SCGB1A1P11684 91 aa9.77□□□□□ -0.85
CDCA3-202ENST00000422785 FAM19A3Q7Z5A8 133 aa9.77□□□□□ -0.85
CDCA3-202ENST00000422785 CDKN2A-AS1Q9UH64 79 aa9.77□□□□□ -0.85
CDCA3-202ENST00000422785 CFC1BP0CG36 223 aa9.76□□□□□ -0.85
CDCA3-202ENST00000422785 CFC1P0CG37 223 aa9.76□□□□□ -0.85
CDCA3-202ENST00000422785 FHL2Q14192 279 aa9.76□□□□□ -0.85
CDCA3-202ENST00000422785 MTURNQ8N3F0 131 aa9.76□□□□□ -0.85
CDCA3-202ENST00000422785 NDUFA12Q9UI09 145 aa9.76□□□□□ -0.85
CDCA3-202ENST00000422785 CRLF1O75462 422 aa9.76□□□□□ -0.85
CDCA3-202ENST00000422785 HERVK_113P63121 156 aa9.76□□□□□ -0.85
CDCA3-202ENST00000422785 KIR2DL5BQ8NHK3 375 aa9.76□□□□□ -0.85
CDCA3-202ENST00000422785 SPATA3Q8NHX4 192 aa9.76□□□□□ -0.85
CDCA3-202ENST00000422785 TMEM243Q9BU79 118 aa9.76□□□□□ -0.85
CDCA3-202ENST00000422785 LOC100131303A0A0U1RQF7 123 aa9.75□□□□□ -0.85
CDCA3-202ENST00000422785 TSPAN13O95857 204 aa9.75□□□□□ -0.85
CDCA3-202ENST00000422785 LINC00242Q5T6M2 205 aa9.75□□□□□ -0.85
CDCA3-202ENST00000422785 CDC42SE2Q9NRR3 84 aa9.75□□□□□ -0.85
CDCA3-202ENST00000422785 SH2D6Q7Z4S9 175 aa9.75□□□□□ -0.85
CDCA3-202ENST00000422785 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.75□□□□□ -0.85
CDCA3-202ENST00000422785 H7C423 109 aa9.75□□□□□ -0.85
CDCA3-202ENST00000422785 HERV-K104P63124 156 aa9.75□□□□□ -0.85
CDCA3-202ENST00000422785 COX6A2Q02221 97 aa9.75□□□□□ -0.85
CDCA3-202ENST00000422785 ZFAND6Q6FIF0 208 aa9.75□□□□□ -0.85
CDCA3-202ENST00000422785 LINC00612Q8N6U2 182 aa9.75□□□□□ -0.85
CDCA3-202ENST00000422785 LITAFQ99732 161 aa9.75□□□□□ -0.85
CDCA3-202ENST00000422785 A8MZ25 164 aa9.74□□□□□ -0.85
CDCA3-202ENST00000422785 UBE2L6O14933 153 aa9.74□□□□□ -0.85
CDCA3-202ENST00000422785 MUSTN1Q8IVN3 82 aa9.74□□□□□ -0.85
CDCA3-202ENST00000422785 HIVEP1P15822 2718 aa9.74□□□□□ -0.85
CDCA3-202ENST00000422785 A4D1N5 150 aa9.74□□□□□ -0.85
CDCA3-202ENST00000422785 SMIM9A6NGZ8 99 aa9.74□□□□□ -0.85
CDCA3-202ENST00000422785 TMEM101Q96IK0 257 aa9.74□□□□□ -0.85
CDCA3-202ENST00000422785 CITED1Q99966 193 aa9.74□□□□□ -0.85
CDCA3-202ENST00000422785 H3BMG7 143 aa9.73□□□□□ -0.85
CDCA3-202ENST00000422785 WFDC2Q14508 124 aa9.73□□□□□ -0.85
CDCA3-202ENST00000422785 PRO1854Q9UHT4 67 aa9.73□□□□□ -0.85
CDCA3-202ENST00000422785 X6R8D5 127 aa9.73□□□□□ -0.85
CDCA3-202ENST00000422785 F8W1H4 67 aa9.73□□□□□ -0.85
CDCA3-202ENST00000422785 DEFB130BP0DP73 79 aa9.72□□□□□ -0.85
CDCA3-202ENST00000422785 DEFB130AP0DP74 79 aa9.72□□□□□ -0.85
CDCA3-202ENST00000422785 VWFP04275 2813 aa9.72□□□□□ -0.85
CDCA3-202ENST00000422785 TRAV13-1A0A0B4J241 112 aa9.72□□□□□ -0.85
CDCA3-202ENST00000422785 IGLV5-39A0A0G2JS06 123 aa9.72□□□□□ -0.85
CDCA3-202ENST00000422785 SPANXDQ9BXN6 97 aa9.72□□□□□ -0.85
CDCA3-202ENST00000422785 SPANXCQ9NY87 97 aa9.72□□□□□ -0.85
CDCA3-202ENST00000422785 RNF183Q96D59 192 aa9.71□□□□□ -0.85
CDCA3-202ENST00000422785 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.71□□□□□ -0.86
CDCA3-202ENST00000422785 A0A0B4J2C4 111 aa9.71□□□□□ -0.86
CDCA3-202ENST00000422785 TRBV6-8A0A0A6YYG3 113 aa9.7□□□□□ -0.86
CDCA3-202ENST00000422785 NDUFA1O15239 70 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms