RNA–Protein interactions for RNA: ENST00000402182.7

APOBEC3B-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene APOBEC3B, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-203ENST00000402182 IGHV1-58A0A0C4DH39 117 aa9.17□□□□□ -0.94
APOBEC3B-203ENST00000402182 G3V4G9 280 aa9.17□□□□□ -0.94
APOBEC3B-203ENST00000402182 IGHV3-30-3P0DP02 117 aa9.17□□□□□ -0.94
APOBEC3B-203ENST00000402182 INSL3P51460 131 aa9.17□□□□□ -0.94
APOBEC3B-203ENST00000402182 FASNP49327 2511 aaKnown RBP9.17□□□□□ -0.94
APOBEC3B-203ENST00000402182 INAFM1C9JVW0 142 aa9.16□□□□□ -0.94
APOBEC3B-203ENST00000402182 GAGE7O76087 117 aa9.16□□□□□ -0.94
APOBEC3B-203ENST00000402182 GAGE12FP0CL80 117 aa9.16□□□□□ -0.94
APOBEC3B-203ENST00000402182 GAGE12GP0CL81 117 aa9.16□□□□□ -0.94
APOBEC3B-203ENST00000402182 GAGE12IP0CL82 117 aa9.16□□□□□ -0.94
APOBEC3B-203ENST00000402182 TRBV6-4A0A1B0GX49 114 aa9.15□□□□□ -0.94
APOBEC3B-203ENST00000402182 TIRAPP58753 221 aa9.15□□□□□ -0.94
APOBEC3B-203ENST00000402182 GEMIN7Q9H840 131 aaKnown RBP9.15□□□□□ -0.94
APOBEC3B-203ENST00000402182 CSDC2Q9Y534 153 aaKnown RBP9.15□□□□□ -0.94
APOBEC3B-203ENST00000402182 GAGE12JA6NER3 117 aa9.15□□□□□ -0.95
APOBEC3B-203ENST00000402182 GAGE4Q13068 117 aa9.15□□□□□ -0.95
APOBEC3B-203ENST00000402182 GAGE5Q13069 117 aa9.15□□□□□ -0.95
APOBEC3B-203ENST00000402182 GAGE13Q4V321 117 aa9.15□□□□□ -0.95
APOBEC3B-203ENST00000402182 GTSF1LQ9H1H1 148 aa9.15□□□□□ -0.95
APOBEC3B-203ENST00000402182 PGPEP1Q9NXJ5 209 aa9.15□□□□□ -0.95
APOBEC3B-203ENST00000402182 IGLV5-45A0A087WSX0 123 aa9.14□□□□□ -0.95
APOBEC3B-203ENST00000402182 VSIG2Q96IQ7 327 aa9.14□□□□□ -0.95
APOBEC3B-203ENST00000402182 C9orf66Q5T8R8 295 aa9.13□□□□□ -0.95
APOBEC3B-203ENST00000402182 NTM-AS1Q6ZSK4 140 aa9.13□□□□□ -0.95
APOBEC3B-203ENST00000402182 SBSPONQ8IVN8 264 aa9.13□□□□□ -0.95
APOBEC3B-203ENST00000402182 C10orf126Q8N4M7 172 aa9.13□□□□□ -0.95
APOBEC3B-203ENST00000402182 TRAV8-3A0A0A6YYJ7 113 aa9.12□□□□□ -0.95
APOBEC3B-203ENST00000402182 TRGV4A0A0C4DH28 118 aa9.12□□□□□ -0.95
APOBEC3B-203ENST00000402182 A0A0J9YXY3 114 aa9.12□□□□□ -0.95
APOBEC3B-203ENST00000402182 APOMO95445 188 aa9.12□□□□□ -0.95
APOBEC3B-203ENST00000402182 FAM19A3Q7Z5A8 133 aa9.12□□□□□ -0.95
APOBEC3B-203ENST00000402182 SETD2Q9BYW2 2564 aaPredicted RBP9.12□□□□□ -0.95
APOBEC3B-203ENST00000402182 LINC00694P0DN24 101 aa9.12□□□□□ -0.95
APOBEC3B-203ENST00000402182 HERVK_113P63121 156 aa9.12□□□□□ -0.95
APOBEC3B-203ENST00000402182 RPL24P83731 157 aaKnown RBP9.12□□□□□ -0.95
APOBEC3B-203ENST00000402182 NDUFA12Q9UI09 145 aa9.12□□□□□ -0.95
APOBEC3B-203ENST00000402182 H7C423 109 aa9.11□□□□□ -0.95
APOBEC3B-203ENST00000402182 TSPAN13O95857 204 aa9.11□□□□□ -0.95
APOBEC3B-203ENST00000402182 SPINK8P0C7L1 97 aa9.11□□□□□ -0.95
APOBEC3B-203ENST00000402182 CFC1BP0CG36 223 aa9.11□□□□□ -0.95
APOBEC3B-203ENST00000402182 CFC1P0CG37 223 aa9.11□□□□□ -0.95
APOBEC3B-203ENST00000402182 TMEM243Q9BU79 118 aa9.11□□□□□ -0.95
APOBEC3B-203ENST00000402182 F8W1H4 67 aa9.1□□□□□ -0.95
APOBEC3B-203ENST00000402182 UBE2L6O14933 153 aa9.1□□□□□ -0.95
APOBEC3B-203ENST00000402182 LYRM7Q5U5X0 104 aa9.1□□□□□ -0.95
APOBEC3B-203ENST00000402182 ZFAND6Q6FIF0 208 aa9.1□□□□□ -0.95
APOBEC3B-203ENST00000402182 KIR2DL5BQ8NHK3 375 aa9.1□□□□□ -0.95
APOBEC3B-203ENST00000402182 CDKN2A-AS1Q9UH64 79 aa9.1□□□□□ -0.95
APOBEC3B-203ENST00000402182 A0A1B0GV72 72 aa9.1□□□□□ -0.95
APOBEC3B-203ENST00000402182 SMIM9A6NGZ8 99 aa9.1□□□□□ -0.95
APOBEC3B-203ENST00000402182 FHL2Q14192 279 aa9.1□□□□□ -0.95
APOBEC3B-203ENST00000402182 TMEM101Q96IK0 257 aa9.1□□□□□ -0.95
APOBEC3B-203ENST00000402182 CDC42SE2Q9NRR3 84 aa9.1□□□□□ -0.95
APOBEC3B-203ENST00000402182 SETXQ7Z333 2677 aaKnown RBP9.09□□□□□ -0.95
APOBEC3B-203ENST00000402182 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.09□□□□□ -0.95
APOBEC3B-203ENST00000402182 A4D1N5 150 aa9.09□□□□□ -0.95
APOBEC3B-203ENST00000402182 CRLF1O75462 422 aa9.09□□□□□ -0.95
APOBEC3B-203ENST00000402182 LINC00242Q5T6M2 205 aa9.09□□□□□ -0.95
APOBEC3B-203ENST00000402182 MUSTN1Q8IVN3 82 aa9.09□□□□□ -0.95
APOBEC3B-203ENST00000402182 PRO1854Q9UHT4 67 aa9.09□□□□□ -0.95
APOBEC3B-203ENST00000402182 GCN1Q92616 2671 aaKnown RBP9.09□□□□□ -0.95
APOBEC3B-203ENST00000402182 A0A0B4J2C4 111 aa9.08□□□□□ -0.96
APOBEC3B-203ENST00000402182 H3BMG7 143 aa9.08□□□□□ -0.96
APOBEC3B-203ENST00000402182 LINC00612Q8N6U2 182 aa9.08□□□□□ -0.96
APOBEC3B-203ENST00000402182 LITAFQ99732 161 aa9.08□□□□□ -0.96
APOBEC3B-203ENST00000402182 SPANXDQ9BXN6 97 aa9.08□□□□□ -0.96
APOBEC3B-203ENST00000402182 SPANXCQ9NY87 97 aa9.08□□□□□ -0.96
APOBEC3B-203ENST00000402182 LOC100131303A0A0U1RQF7 123 aa9.08□□□□□ -0.96
APOBEC3B-203ENST00000402182 IGLV5-39A0A0G2JS06 123 aa9.07□□□□□ -0.96
APOBEC3B-203ENST00000402182 TIMM17BO60830 172 aa9.07□□□□□ -0.96
APOBEC3B-203ENST00000402182 COX6A2Q02221 97 aa9.07□□□□□ -0.96
APOBEC3B-203ENST00000402182 CITED1Q99966 193 aa9.07□□□□□ -0.96
APOBEC3B-203ENST00000402182 JMJD1CQ15652 2540 aa9.06□□□□□ -0.96
APOBEC3B-203ENST00000402182 TRAV13-1A0A0B4J241 112 aa9.06□□□□□ -0.96
APOBEC3B-203ENST00000402182 LOC107984156A0A0G2JMH3 177 aa9.06□□□□□ -0.96
APOBEC3B-203ENST00000402182 A8MZ25 164 aa9.06□□□□□ -0.96
APOBEC3B-203ENST00000402182 NDUFA1O15239 70 aa9.06□□□□□ -0.96
APOBEC3B-203ENST00000402182 ARL17AQ8IVW1 177 aa9.06□□□□□ -0.96
APOBEC3B-203ENST00000402182 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.06□□□□□ -0.96
APOBEC3B-203ENST00000402182 X6R8D5 127 aa9.06□□□□□ -0.96
APOBEC3B-203ENST00000402182 HECTD1Q9ULT8 2610 aa9.06□□□□□ -0.96
APOBEC3B-203ENST00000402182 DEFB130BP0DP73 79 aa9.05□□□□□ -0.96
APOBEC3B-203ENST00000402182 DEFB130AP0DP74 79 aa9.05□□□□□ -0.96
APOBEC3B-203ENST00000402182 MIAQ16674 131 aa9.05□□□□□ -0.96
APOBEC3B-203ENST00000402182 TRBV6-8A0A0A6YYG3 113 aa9.05□□□□□ -0.96
APOBEC3B-203ENST00000402182 TRBV20-1A0A075B6N2 111 aa9.04□□□□□ -0.96
APOBEC3B-203ENST00000402182 SMIM1B2RUZ4 78 aa9.04□□□□□ -0.96
APOBEC3B-203ENST00000402182 SPATA3Q8NHX4 192 aa9.04□□□□□ -0.96
APOBEC3B-203ENST00000402182 IGHV3-33P01772 117 aa9.03□□□□□ -0.96
APOBEC3B-203ENST00000402182 PRSS2P07478 247 aa9.03□□□□□ -0.96
APOBEC3B-203ENST00000402182 IFITM1P13164 125 aa9.03□□□□□ -0.96
APOBEC3B-203ENST00000402182 APOC4P55056 127 aa9.03□□□□□ -0.96
APOBEC3B-203ENST00000402182 CIRBPQ14011 172 aaKnown RBP9.03□□□□□ -0.96
APOBEC3B-203ENST00000402182 ADAMTSL4-AS1Q5T5F5 129 aa9.03□□□□□ -0.96
APOBEC3B-203ENST00000402182 RNF183Q96D59 192 aa9.03□□□□□ -0.96
APOBEC3B-203ENST00000402182 PRO0461Q9UI25 63 aa9.03□□□□□ -0.96
APOBEC3B-203ENST00000402182 ERG28Q9UKR5 140 aa9.03□□□□□ -0.96
APOBEC3B-203ENST00000402182 OTOGQ6ZRI0 2925 aa9.03□□□□□ -0.96
APOBEC3B-203ENST00000402182 LYRM9A8MSI8 78 aa9.03□□□□□ -0.96
APOBEC3B-203ENST00000402182 EIF4EBP3O60516 100 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 172.9 ms