RNA–Protein interactions for RNA: ENST00000394828.6

PPP3CB-203, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-203ENST00000394828 MRPL53Q96EL3 112 aaKnown RBP8.69□□□□□ -1.02
PPP3CB-203ENST00000394828 C16orf92Q96LL3 132 aa8.69□□□□□ -1.02
PPP3CB-203ENST00000394828 A0A0B4J2C4 111 aa8.69□□□□□ -1.02
PPP3CB-203ENST00000394828 IGIPA6NJ69 53 aa8.69□□□□□ -1.02
PPP3CB-203ENST00000394828 SYNJ2BPP57105 145 aa8.69□□□□□ -1.02
PPP3CB-203ENST00000394828 GNRH2O43555 120 aa8.68□□□□□ -1.02
PPP3CB-203ENST00000394828 S100A4P26447 101 aaKnown RBP8.68□□□□□ -1.02
PPP3CB-203ENST00000394828 C9orf47Q6ZRZ4 202 aa8.68□□□□□ -1.02
PPP3CB-203ENST00000394828 A0A087WWL8 130 aa8.68□□□□□ -1.02
PPP3CB-203ENST00000394828 TRAV13-1A0A0B4J241 112 aa8.68□□□□□ -1.02
PPP3CB-203ENST00000394828 I3L3M4 83 aa8.68□□□□□ -1.02
PPP3CB-203ENST00000394828 RNASE13Q5GAN3 156 aaKnown RBP8.68□□□□□ -1.02
PPP3CB-203ENST00000394828 NOTCH2Q04721 2471 aa8.68□□□□□ -1.02
PPP3CB-203ENST00000394828 C4orf3Q8WVX3 66 aa8.67□□□□□ -1.02
PPP3CB-203ENST00000394828 IGKV3-7A0A075B6H7 116 aa8.67□□□□□ -1.02
PPP3CB-203ENST00000394828 SLURP1P55000 103 aa8.67□□□□□ -1.02
PPP3CB-203ENST00000394828 C2orf48Q96LS8 159 aa8.67□□□□□ -1.02
PPP3CB-203ENST00000394828 A0A0J9YXV3 536 aa8.67□□□□□ -1.02
PPP3CB-203ENST00000394828 TRBV30A0A0K0K1B3 111 aa8.67□□□□□ -1.02
PPP3CB-203ENST00000394828 HILS1P60008 231 aa8.67□□□□□ -1.02
PPP3CB-203ENST00000394828 RPL11P62913 178 aaKnown RBP8.67□□□□□ -1.02
PPP3CB-203ENST00000394828 PHLDA3Q9Y5J5 127 aa8.67□□□□□ -1.02
PPP3CB-203ENST00000394828 A0A0J9YXY3 114 aa8.66□□□□□ -1.02
PPP3CB-203ENST00000394828 OVOL1O14753 267 aa8.66□□□□□ -1.02
PPP3CB-203ENST00000394828 SRSF2Q01130 221 aaKnown RBP8.66□□□□□ -1.02
PPP3CB-203ENST00000394828 OR13C6PQ8NH95 151 aa8.66□□□□□ -1.02
PPP3CB-203ENST00000394828 DCANP1Q8TF63 244 aa8.66□□□□□ -1.02
PPP3CB-203ENST00000394828 A0A0U1RRA0 63 aa8.65□□□□□ -1.02
PPP3CB-203ENST00000394828 LINC01006Q8NI28 216 aa8.65□□□□□ -1.02
PPP3CB-203ENST00000394828 C16orf95Q9H693 158 aa8.65□□□□□ -1.02
PPP3CB-203ENST00000394828 HIVEP1P15822 2718 aa8.65□□□□□ -1.02
PPP3CB-203ENST00000394828 SORL1Q92673 2214 aa8.65□□□□□ -1.02
PPP3CB-203ENST00000394828 A0A087WVE0 104 aa8.65□□□□□ -1.02
PPP3CB-203ENST00000394828 COX7CP15954 63 aa8.65□□□□□ -1.02
PPP3CB-203ENST00000394828 SDIM1Q6ZPB5 146 aa8.65□□□□□ -1.02
PPP3CB-203ENST00000394828 FAM19A4Q96LR4 140 aa8.65□□□□□ -1.02
PPP3CB-203ENST00000394828 DPH3P1Q9H4G8 78 aa8.65□□□□□ -1.02
PPP3CB-203ENST00000394828 SPANXA1Q9NS26 97 aa8.65□□□□□ -1.02
PPP3CB-203ENST00000394828 HIVEP2P31629 2446 aa8.65□□□□□ -1.03
PPP3CB-203ENST00000394828 NSD1Q96L73 2696 aaPredicted RBP8.65□□□□□ -1.03
PPP3CB-203ENST00000394828 F5H697 171 aa8.65□□□□□ -1.03
PPP3CB-203ENST00000394828 KHDC1LQ5JSQ8 128 aa8.65□□□□□ -1.03
PPP3CB-203ENST00000394828 CD28P10747 220 aa8.64□□□□□ -1.03
PPP3CB-203ENST00000394828 ZNF876PQ49A33 203 aa8.64□□□□□ -1.03
PPP3CB-203ENST00000394828 DPH3Q96FX2 82 aa8.64□□□□□ -1.03
PPP3CB-203ENST00000394828 FAM74A4Q5TZK3 123 aa8.64□□□□□ -1.03
PPP3CB-203ENST00000394828 C11orf44Q8N8P7 122 aa8.64□□□□□ -1.03
PPP3CB-203ENST00000394828 LINC00477Q96M19 166 aa8.64□□□□□ -1.03
PPP3CB-203ENST00000394828 F6UB75 175 aa8.63□□□□□ -1.03
PPP3CB-203ENST00000394828 H3BT86 120 aa8.63□□□□□ -1.03
PPP3CB-203ENST00000394828 LST1O00453 97 aa8.63□□□□□ -1.03
PPP3CB-203ENST00000394828 WIPF1O43516 503 aa8.63□□□□□ -1.03
PPP3CB-203ENST00000394828 NXPH4O95158 308 aa8.63□□□□□ -1.03
PPP3CB-203ENST00000394828 SETXQ7Z333 2677 aaKnown RBP8.63□□□□□ -1.03
PPP3CB-203ENST00000394828 FAM240AA0A1B0GVK7 77 aa8.63□□□□□ -1.03
PPP3CB-203ENST00000394828 INAFM1C9JVW0 142 aa8.63□□□□□ -1.03
PPP3CB-203ENST00000394828 Q5XG85 94 aa8.63□□□□□ -1.03
PPP3CB-203ENST00000394828 LITAFQ99732 161 aa8.63□□□□□ -1.03
PPP3CB-203ENST00000394828 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.63□□□□□ -1.03
PPP3CB-203ENST00000394828 IGKV3D-7A0A0C4DH55 119 aa8.63□□□□□ -1.03
PPP3CB-203ENST00000394828 A0A1B0GX51 115 aa8.62□□□□□ -1.03
PPP3CB-203ENST00000394828 IGHV4-4A0A075B6R2 117 aa8.62□□□□□ -1.03
PPP3CB-203ENST00000394828 LEPROTO15243 131 aa8.62□□□□□ -1.03
PPP3CB-203ENST00000394828 A0A1W2PRX2 142 aa8.61□□□□□ -1.03
PPP3CB-203ENST00000394828 SDHAF1A6NFY7 115 aa8.61□□□□□ -1.03
PPP3CB-203ENST00000394828 IGHV3-30-3P0DP02 117 aa8.61□□□□□ -1.03
PPP3CB-203ENST00000394828 RNASE4P34096 147 aaKnown RBP8.61□□□□□ -1.03
PPP3CB-203ENST00000394828 CITED2Q99967 270 aaPredicted RBP8.61□□□□□ -1.03
PPP3CB-203ENST00000394828 K7EQG2 157 aa8.6□□□□□ -1.03
PPP3CB-203ENST00000394828 TRACP01848 142 aa8.6□□□□□ -1.03
PPP3CB-203ENST00000394828 DAZ2Q13117 558 aaKnown RBP8.6□□□□□ -1.03
PPP3CB-203ENST00000394828 SUMO4Q6EEV6 95 aa8.6□□□□□ -1.03
PPP3CB-203ENST00000394828 DAZ4Q86SG3 579 aaKnown RBP8.6□□□□□ -1.03
PPP3CB-203ENST00000394828 DAZ3Q9NR90 486 aaKnown RBP8.6□□□□□ -1.03
PPP3CB-203ENST00000394828 COX6CP09669 75 aa8.6□□□□□ -1.03
PPP3CB-203ENST00000394828 DEFB121Q5J5C9 76 aa8.6□□□□□ -1.03
PPP3CB-203ENST00000394828 ZFAND2AQ8N6M9 145 aa8.6□□□□□ -1.03
PPP3CB-203ENST00000394828 PAPPA-AS1Q5QFB9 102 aa8.6□□□□□ -1.03
PPP3CB-203ENST00000394828 SETD2Q9BYW2 2564 aaPredicted RBP8.59□□□□□ -1.03
PPP3CB-203ENST00000394828 LINC00643Q86TS7 51 aa8.59□□□□□ -1.03
PPP3CB-203ENST00000394828 ZNF625Q96I27 306 aaPredicted RBP8.59□□□□□ -1.03
PPP3CB-203ENST00000394828 CRYGAP11844 174 aa8.59□□□□□ -1.03
PPP3CB-203ENST00000394828 RNASE3P12724 160 aaKnown RBP8.59□□□□□ -1.03
PPP3CB-203ENST00000394828 TIMM21Q9BVV7 248 aa8.59□□□□□ -1.03
PPP3CB-203ENST00000394828 LENEPQ9Y5L5 61 aa8.59□□□□□ -1.03
PPP3CB-203ENST00000394828 FN1P02751 2386 aaKnown RBP8.59□□□□□ -1.03
PPP3CB-203ENST00000394828 NIPBLQ6KC79 2804 aaeCLIP8.58□□□□□ -1.04
PPP3CB-203ENST00000394828 LINC00315P59091 139 aa8.58□□□□□ -1.04
PPP3CB-203ENST00000394828 LINC01600Q96MT4 127 aa8.58□□□□□ -1.04
PPP3CB-203ENST00000394828 PROK1P58294 105 aa8.58□□□□□ -1.04
PPP3CB-203ENST00000394828 Q9HAA7 133 aa8.58□□□□□ -1.04
PPP3CB-203ENST00000394828 POLR2KP53803 58 aaKnown RBP8.58□□□□□ -1.04
PPP3CB-203ENST00000394828 TIRAPP58753 221 aa8.58□□□□□ -1.04
PPP3CB-203ENST00000394828 C9orf129Q5T035 196 aaKnown RBP8.58□□□□□ -1.04
PPP3CB-203ENST00000394828 PEMTQ9UBM1 199 aa8.58□□□□□ -1.04
PPP3CB-203ENST00000394828 KRTAP10-3P60369 221 aa8.57□□□□□ -1.04
PPP3CB-203ENST00000394828 CIRBPQ14011 172 aaKnown RBP8.57□□□□□ -1.04
PPP3CB-203ENST00000394828 PKIGQ9Y2B9 76 aa8.57□□□□□ -1.04
PPP3CB-203ENST00000394828 CCL24O00175 119 aa8.57□□□□□ -1.04
PPP3CB-203ENST00000394828 APRG1Q8IVJ8 170 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms