RNA–Protein interactions for RNA: ENST00000390528.1

TRAJ9-201, Transcript of T cell receptor alpha joining 9, humanhuman

APPRIS P1 BASIC

Gene TRAJ9, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ9-201ENST00000390528 CCL2P13500 99 aa-4.11□□□□□ -3.07
TRAJ9-201ENST00000390528 TMED2Q15363 201 aa-4.11□□□□□ -3.07
TRAJ9-201ENST00000390528 NKAIN1Q4KMZ8 207 aa-4.11□□□□□ -3.07
TRAJ9-201ENST00000390528 DCUN1D5Q9BTE7 237 aa-4.11□□□□□ -3.07
TRAJ9-201ENST00000390528 TGIF2-C20orf24A0A0A6YYL0 155 aa-4.12□□□□□ -3.07
TRAJ9-201ENST00000390528 TRBV27A0A0K0K1C4 114 aa-4.12□□□□□ -3.07
TRAJ9-201ENST00000390528 TMEM213A2RRL7 107 aa-4.12□□□□□ -3.07
TRAJ9-201ENST00000390528 H3BQV1 296 aa-4.12□□□□□ -3.07
TRAJ9-201ENST00000390528 DCTN3O75935 186 aa-4.12□□□□□ -3.07
TRAJ9-201ENST00000390528 BLVRAP53004 296 aa-4.12□□□□□ -3.07
TRAJ9-201ENST00000390528 C4AP0C0L4 1744 aa-4.12□□□□□ -3.07
TRAJ9-201ENST00000390528 C4BP0C0L5 1744 aa-4.12□□□□□ -3.07
TRAJ9-201ENST00000390528 XRN1Q8IZH2 1706 aaKnown RBP-4.12□□□□□ -3.07
TRAJ9-201ENST00000390528 BTAF1O14981 1849 aa-4.13□□□□□ -3.07
TRAJ9-201ENST00000390528 MMP24-AS1A0A0U1RRL7 71 aa-4.13□□□□□ -3.07
TRAJ9-201ENST00000390528 PPP5D1E7EU14 171 aa-4.13□□□□□ -3.07
TRAJ9-201ENST00000390528 SMLR1H3BR10 107 aa-4.13□□□□□ -3.07
TRAJ9-201ENST00000390528 AIPO00170 330 aa-4.13□□□□□ -3.07
TRAJ9-201ENST00000390528 HBDP02042 147 aa-4.13□□□□□ -3.07
TRAJ9-201ENST00000390528 SRP9P49458 86 aaKnown RBP-4.13□□□□□ -3.07
TRAJ9-201ENST00000390528 SCGB2B2Q4G0G5 96 aa-4.13□□□□□ -3.07
TRAJ9-201ENST00000390528 ARL6IP6Q8N6S5 226 aa-4.13□□□□□ -3.07
TRAJ9-201ENST00000390528 NOP16Q9Y3C1 178 aaKnown RBP-4.13□□□□□ -3.07
TRAJ9-201ENST00000390528 RGPD2P0DJD1 1756 aa-4.13□□□□□ -3.07
TRAJ9-201ENST00000390528 KIAA1551Q9HCM1 1747 aa-4.13□□□□□ -3.07
TRAJ9-201ENST00000390528 UHRF1BP1LA0JNW5 1464 aa-4.13□□□□□ -3.07
TRAJ9-201ENST00000390528 RTL8BQ17RB0 113 aa-4.14□□□□□ -3.07
TRAJ9-201ENST00000390528 OGFRL1Q5TC84 451 aaPredicted RBP-4.14□□□□□ -3.07
TRAJ9-201ENST00000390528 RTL8AQ9BWD3 113 aa-4.14□□□□□ -3.07
TRAJ9-201ENST00000390528 SLC35B3Q9H1N7 401 aa-4.14□□□□□ -3.07
TRAJ9-201ENST00000390528 LENEPQ9Y5L5 61 aa-4.14□□□□□ -3.07
TRAJ9-201ENST00000390528 RIMS1Q86UR5 1692 aaKnown RBP-4.14□□□□□ -3.07
TRAJ9-201ENST00000390528 RRAS2P62070 204 aaPredicted RBP-4.15□□□□□ -3.07
TRAJ9-201ENST00000390528 ATP6V0E2Q8NHE4 81 aa-4.15□□□□□ -3.07
TRAJ9-201ENST00000390528 FAM167A-AS1Q96KT0 104 aa-4.15□□□□□ -3.07
TRAJ9-201ENST00000390528 OTORQ9NRC9 128 aa-4.15□□□□□ -3.07
TRAJ9-201ENST00000390528 WDFY3Q8IZQ1 3526 aa-4.15□□□□□ -3.07
TRAJ9-201ENST00000390528 NWD2Q9ULI1 1742 aa-4.15□□□□□ -3.07
TRAJ9-201ENST00000390528 IQCF5A8MTL0 148 aa-4.16□□□□□ -3.08
TRAJ9-201ENST00000390528 TMEM114B3SHH9 223 aa-4.16□□□□□ -3.08
TRAJ9-201ENST00000390528 M0QZ92 97 aa-4.16□□□□□ -3.08
TRAJ9-201ENST00000390528 HMGB3O15347 200 aaKnown RBP-4.16□□□□□ -3.08
TRAJ9-201ENST00000390528 S100A6P06703 90 aa-4.16□□□□□ -3.08
TRAJ9-201ENST00000390528 CRYGSP22914 178 aa-4.16□□□□□ -3.08
TRAJ9-201ENST00000390528 HSD11B1P28845 292 aa-4.16□□□□□ -3.08
TRAJ9-201ENST00000390528 RPL7L1Q6DKI1 246 aaKnown RBP-4.16□□□□□ -3.08
TRAJ9-201ENST00000390528 CROCCP2Q86T23 111 aa-4.16□□□□□ -3.08
TRAJ9-201ENST00000390528 TTC9CQ8N5M4 171 aa-4.16□□□□□ -3.08
TRAJ9-201ENST00000390528 FGFR1OP2Q9NVK5 253 aa-4.16□□□□□ -3.08
TRAJ9-201ENST00000390528 PLEKHJ1Q9NW61 149 aa-4.16□□□□□ -3.08
TRAJ9-201ENST00000390528 COPZ2Q9P299 210 aa-4.16□□□□□ -3.08
TRAJ9-201ENST00000390528 LINC01558Q9Y6Z2 57 aa-4.16□□□□□ -3.08
TRAJ9-201ENST00000390528 C9orf84Q5VXU9 1444 aa-4.16□□□□□ -3.08
TRAJ9-201ENST00000390528 J3QLW9 94 aa-4.17□□□□□ -3.08
TRAJ9-201ENST00000390528 APOA2P02652 100 aa-4.17□□□□□ -3.08
TRAJ9-201ENST00000390528 UBA52P62987 128 aaKnown RBP-4.17□□□□□ -3.08
TRAJ9-201ENST00000390528 SKP1P63208 163 aa-4.17□□□□□ -3.08
TRAJ9-201ENST00000390528 SEC11AP67812 179 aa-4.17□□□□□ -3.08
TRAJ9-201ENST00000390528 NLRP1Q9C000 1473 aa-4.18□□□□□ -3.08
TRAJ9-201ENST00000390528 LRRC37AA6NMS7 1700 aa-4.18□□□□□ -3.08
TRAJ9-201ENST00000390528 TRAV13-1A0A0B4J241 112 aa-4.18□□□□□ -3.08
TRAJ9-201ENST00000390528 A6NIN4 97 aa-4.18□□□□□ -3.08
TRAJ9-201ENST00000390528 RIIAD1A6NNX1 92 aa-4.18□□□□□ -3.08
TRAJ9-201ENST00000390528 SIX6O95475 246 aa-4.18□□□□□ -3.08
TRAJ9-201ENST00000390528 BORCS8Q96FH0 119 aa-4.18□□□□□ -3.08
TRAJ9-201ENST00000390528 CEP350Q5VT06 3117 aa-4.18□□□□□ -3.08
TRAJ9-201ENST00000390528 CFAP54Q96N23 3096 aa-4.18□□□□□ -3.08
TRAJ9-201ENST00000390528 BORCS7-ASMTA0A0B4J1R7 106 aa-4.19□□□□□ -3.08
TRAJ9-201ENST00000390528 NDUFC2O95298 119 aa-4.19□□□□□ -3.08
TRAJ9-201ENST00000390528 HIST1H1EP10412 219 aaKnown RBP-4.19□□□□□ -3.08
TRAJ9-201ENST00000390528 SDC2P34741 201 aa-4.19□□□□□ -3.08
TRAJ9-201ENST00000390528 NCALDP61601 193 aa-4.19□□□□□ -3.08
TRAJ9-201ENST00000390528 C5orf38Q86SI9 138 aa-4.19□□□□□ -3.08
TRAJ9-201ENST00000390528 C1orf167Q5SNV9 1468 aa-4.19□□□□□ -3.08
TRAJ9-201ENST00000390528 SNAPC4Q5SXM2 1469 aa-4.19□□□□□ -3.08
TRAJ9-201ENST00000390528 CEP170BQ9Y4F5 1589 aaPredicted RBP-4.19□□□□□ -3.08
TRAJ9-201ENST00000390528 SCN11AQ9UI33 1791 aa-4.19□□□□□ -3.08
TRAJ9-201ENST00000390528 IGLC7A0M8Q6 106 aa-4.2□□□□□ -3.08
TRAJ9-201ENST00000390528 H3BMG7 143 aa-4.2□□□□□ -3.08
TRAJ9-201ENST00000390528 FAM107AO95990 144 aa-4.2□□□□□ -3.08
TRAJ9-201ENST00000390528 COX5BP10606 129 aa-4.2□□□□□ -3.08
TRAJ9-201ENST00000390528 HIST1H1BP16401 226 aaKnown RBP-4.2□□□□□ -3.08
TRAJ9-201ENST00000390528 NMSQ5H8A3 153 aa-4.2□□□□□ -3.08
TRAJ9-201ENST00000390528 LINC00305Q7Z4B0 112 aa-4.2□□□□□ -3.08
TRAJ9-201ENST00000390528 DEFB106AQ8N104 65 aa-4.2□□□□□ -3.08
TRAJ9-201ENST00000390528 ANKRD36A6QL64 1941 aa-4.21□□□□□ -3.08
TRAJ9-201ENST00000390528 LOC100130705A0A1B0GUX0 176 aa-4.21□□□□□ -3.08
TRAJ9-201ENST00000390528 LINC01546A6NGU7 62 aa-4.21□□□□□ -3.08
TRAJ9-201ENST00000390528 UQCRQO14949 82 aa-4.21□□□□□ -3.08
TRAJ9-201ENST00000390528 LCN1P31025 176 aa-4.21□□□□□ -3.08
TRAJ9-201ENST00000390528 SNCAP37840 140 aa-4.21□□□□□ -3.08
TRAJ9-201ENST00000390528 TMEM78Q5T7P6 136 aa-4.21□□□□□ -3.08
TRAJ9-201ENST00000390528 LINC01545Q5VT33 79 aa-4.21□□□□□ -3.08
TRAJ9-201ENST00000390528 LCN9Q8WX39 176 aa-4.21□□□□□ -3.08
TRAJ9-201ENST00000390528 PRO1933Q9H354 126 aa-4.21□□□□□ -3.08
TRAJ9-201ENST00000390528 PRG4Q92954 1404 aaPredicted RBP-4.21□□□□□ -3.08
TRAJ9-201ENST00000390528 SPTY2D1-AS1A0A0U1RR47 76 aa-4.22□□□□□ -3.08
TRAJ9-201ENST00000390528 H0YIV9 168 aa-4.22□□□□□ -3.08
TRAJ9-201ENST00000390528 CCL8P80075 99 aa-4.22□□□□□ -3.08
TRAJ9-201ENST00000390528 SPANXN1Q5VSR9 72 aa-4.22□□□□□ -3.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms