RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 IGHV4-28A0A0C4DH34 117 aa10.62□□□□□ -0.71
SNX2-201ENST00000379516 LYRM9A8MSI8 78 aa10.62□□□□□ -0.71
SNX2-201ENST00000379516 TSPEAR-AS2P59090 65 aa10.62□□□□□ -0.71
SNX2-201ENST00000379516 SHISA2Q6UWI4 295 aa10.62□□□□□ -0.71
SNX2-201ENST00000379516 SCGB1D4Q6XE38 83 aa10.62□□□□□ -0.71
SNX2-201ENST00000379516 PRIMA1Q86XR5 153 aa10.62□□□□□ -0.71
SNX2-201ENST00000379516 BAHCC1Q9P281 2608 aa10.62□□□□□ -0.71
SNX2-201ENST00000379516 IGHV3-64A0A075B6Q5 118 aa10.61□□□□□ -0.71
SNX2-201ENST00000379516 SBSPONQ8IVN8 264 aa10.61□□□□□ -0.71
SNX2-201ENST00000379516 CEND1Q8N111 149 aa10.61□□□□□ -0.71
SNX2-201ENST00000379516 HIST1H4GQ99525 98 aa10.61□□□□□ -0.71
SNX2-201ENST00000379516 TINCRA0A1B0GVN0 87 aa10.61□□□□□ -0.71
SNX2-201ENST00000379516 J3QQQ9 107 aa10.61□□□□□ -0.71
SNX2-201ENST00000379516 UBE2L6O14933 153 aa10.61□□□□□ -0.71
SNX2-201ENST00000379516 FXYD2P54710 66 aa10.61□□□□□ -0.71
SNX2-201ENST00000379516 PLEKHB2Q96CS7 222 aa10.61□□□□□ -0.71
SNX2-201ENST00000379516 TMEM243Q9BU79 118 aa10.61□□□□□ -0.71
SNX2-201ENST00000379516 K7EP13 123 aa10.6□□□□□ -0.71
SNX2-201ENST00000379516 LEPROTO15243 131 aa10.6□□□□□ -0.71
SNX2-201ENST00000379516 LGALS3P17931 250 aaKnown RBP10.6□□□□□ -0.71
SNX2-201ENST00000379516 PTTG1IPP53801 180 aa10.6□□□□□ -0.71
SNX2-201ENST00000379516 UBE2D1P51668 147 aa10.6□□□□□ -0.71
SNX2-201ENST00000379516 KRTAP10-11P60412 298 aa10.6□□□□□ -0.71
SNX2-201ENST00000379516 TAL2Q16559 108 aa10.6□□□□□ -0.71
SNX2-201ENST00000379516 CSDC2Q9Y534 153 aaKnown RBP10.6□□□□□ -0.71
SNX2-201ENST00000379516 SMAGPQ0VAQ4 97 aa10.59□□□□□ -0.71
SNX2-201ENST00000379516 AMMECR1LQ6DCA0 310 aa10.59□□□□□ -0.71
SNX2-201ENST00000379516 RNF183Q96D59 192 aa10.59□□□□□ -0.71
SNX2-201ENST00000379516 TM2D2Q9BX73 214 aa10.59□□□□□ -0.71
SNX2-201ENST00000379516 MIFP14174 115 aa10.58□□□□□ -0.72
SNX2-201ENST00000379516 OR5A1Q8NGJ0 315 aa10.58□□□□□ -0.72
SNX2-201ENST00000379516 GEMIN7Q9H840 131 aaKnown RBP10.58□□□□□ -0.72
SNX2-201ENST00000379516 GYPEP15421 78 aa10.58□□□□□ -0.72
SNX2-201ENST00000379516 LINC00469Q8N7U9 141 aa10.58□□□□□ -0.72
SNX2-201ENST00000379516 Q8NAQ8 132 aa10.58□□□□□ -0.72
SNX2-201ENST00000379516 H3BRM9 83 aa10.57□□□□□ -0.72
SNX2-201ENST00000379516 RAB37Q96AX2 223 aa10.57□□□□□ -0.72
SNX2-201ENST00000379516 TMEM101Q96IK0 257 aa10.57□□□□□ -0.72
SNX2-201ENST00000379516 PRO0255Q9UI72 69 aa10.57□□□□□ -0.72
SNX2-201ENST00000379516 TRBV6-8A0A0A6YYG3 113 aa10.57□□□□□ -0.72
SNX2-201ENST00000379516 DAD1P61803 113 aa10.57□□□□□ -0.72
SNX2-201ENST00000379516 CDC42SE2Q9NRR3 84 aa10.57□□□□□ -0.72
SNX2-201ENST00000379516 TRAV8-3A0A0A6YYJ7 113 aa10.56□□□□□ -0.72
SNX2-201ENST00000379516 SMIM13P0DJ93 91 aa10.56□□□□□ -0.72
SNX2-201ENST00000379516 A0A0J9YY99 117 aa10.55□□□□□ -0.72
SNX2-201ENST00000379516 H7C423 109 aa10.55□□□□□ -0.72
SNX2-201ENST00000379516 IGHV3-30-3P0DP02 117 aa10.55□□□□□ -0.72
SNX2-201ENST00000379516 TIRAPP58753 221 aa10.55□□□□□ -0.72
SNX2-201ENST00000379516 GAGE6Q13070 117 aa10.55□□□□□ -0.72
SNX2-201ENST00000379516 SRSF9Q13242 221 aaKnown RBP eCLIP10.55□□□□□ -0.72
SNX2-201ENST00000379516 VAMP3Q15836 100 aa10.55□□□□□ -0.72
SNX2-201ENST00000379516 ATP6V0E2Q8NHE4 81 aa10.55□□□□□ -0.72
SNX2-201ENST00000379516 NHP2Q9NX24 153 aaKnown RBP10.55□□□□□ -0.72
SNX2-201ENST00000379516 CELA1Q9UNI1 258 aa10.55□□□□□ -0.72
SNX2-201ENST00000379516 TRAV13-1A0A0B4J241 112 aa10.55□□□□□ -0.72
SNX2-201ENST00000379516 PAX4O43316 350 aa10.55□□□□□ -0.72
SNX2-201ENST00000379516 SPINK8P0C7L1 97 aa10.55□□□□□ -0.72
SNX2-201ENST00000379516 EGFEM1PQ0D2K5 195 aa10.55□□□□□ -0.72
SNX2-201ENST00000379516 CDKN2A-AS1Q9UH64 79 aa10.55□□□□□ -0.72
SNX2-201ENST00000379516 IGHV1-58A0A0C4DH39 117 aa10.54□□□□□ -0.72
SNX2-201ENST00000379516 CHCHD5Q9BSY4 110 aa10.54□□□□□ -0.72
SNX2-201ENST00000379516 COX6A2Q02221 97 aa10.54□□□□□ -0.72
SNX2-201ENST00000379516 LINC00242Q5T6M2 205 aa10.54□□□□□ -0.72
SNX2-201ENST00000379516 STAB1Q9NY15 2570 aa10.53□□□□□ -0.72
SNX2-201ENST00000379516 C9orf118A6NHY6 69 aa10.53□□□□□ -0.72
SNX2-201ENST00000379516 K7ERJ3 54 aa10.53□□□□□ -0.72
SNX2-201ENST00000379516 SPART-AS1P0CW21 52 aa10.53□□□□□ -0.72
SNX2-201ENST00000379516 HERVK_113P63121 156 aa10.53□□□□□ -0.72
SNX2-201ENST00000379516 CMYA5Q8N3K9 4069 aa10.53□□□□□ -0.72
SNX2-201ENST00000379516 A0A096LPF7 62 aa10.52□□□□□ -0.72
SNX2-201ENST00000379516 VSIG2Q96IQ7 327 aa10.52□□□□□ -0.72
SNX2-201ENST00000379516 IGLV5-45A0A087WSX0 123 aa10.52□□□□□ -0.73
SNX2-201ENST00000379516 H3BUT2 72 aa10.52□□□□□ -0.73
SNX2-201ENST00000379516 ATP5G1P05496 136 aa10.52□□□□□ -0.73
SNX2-201ENST00000379516 FAM19A3Q7Z5A8 133 aa10.52□□□□□ -0.73
SNX2-201ENST00000379516 NAA38Q9BRA0 125 aaKnown RBP10.52□□□□□ -0.73
SNX2-201ENST00000379516 A8MZ25 164 aa10.51□□□□□ -0.73
SNX2-201ENST00000379516 UBE2V1Q13404 147 aa10.51□□□□□ -0.73
SNX2-201ENST00000379516 SPANXB1Q9NS25 103 aaPredicted RBP10.51□□□□□ -0.73
SNX2-201ENST00000379516 IGLV4-60A0A075B6I1 120 aa10.5□□□□□ -0.73
SNX2-201ENST00000379516 F5H768 121 aa10.5□□□□□ -0.73
SNX2-201ENST00000379516 G3V4G9 280 aa10.5□□□□□ -0.73
SNX2-201ENST00000379516 C12orf74Q32Q52 190 aa10.5□□□□□ -0.73
SNX2-201ENST00000379516 C10orf126Q8N4M7 172 aa10.5□□□□□ -0.73
SNX2-201ENST00000379516 CCL25O15444 150 aa10.49□□□□□ -0.73
SNX2-201ENST00000379516 NDUFA12Q9UI09 145 aa10.49□□□□□ -0.73
SNX2-201ENST00000379516 MAST4O15021 2626 aa10.49□□□□□ -0.73
SNX2-201ENST00000379516 HTN3P15516 51 aa10.49□□□□□ -0.73
SNX2-201ENST00000379516 RETNQ9HD89 108 aa10.49□□□□□ -0.73
SNX2-201ENST00000379516 TRAV26-1A0A087WT03 109 aa10.48□□□□□ -0.73
SNX2-201ENST00000379516 IGKV3OR2-268A0A0C4DH90 116 aa10.48□□□□□ -0.73
SNX2-201ENST00000379516 A0A0J9YXY3 114 aa10.48□□□□□ -0.73
SNX2-201ENST00000379516 PKD1L1Q8TDX9 2849 aa10.48□□□□□ -0.73
SNX2-201ENST00000379516 TMEM238LA0A1B0GVL6 79 aa10.48□□□□□ -0.73
SNX2-201ENST00000379516 A6NJY4 79 aa10.48□□□□□ -0.73
SNX2-201ENST00000379516 TMEM262E9PQX1 116 aa10.48□□□□□ -0.73
SNX2-201ENST00000379516 IGHV3-30P01768 117 aa10.48□□□□□ -0.73
SNX2-201ENST00000379516 IGHV3-30-5P0DP03 117 aa10.48□□□□□ -0.73
SNX2-201ENST00000379516 SAMD5Q5TGI4 173 aa10.46□□□□□ -0.73
SNX2-201ENST00000379516 A0A1B0GWB2 263 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms