RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 TRBV6-8A0A0A6YYG3 113 aa13.23□□□□□ -0.29
CNTNAP3-204ENST00000377656 LINC01006Q8NI28 216 aa13.23□□□□□ -0.29
CNTNAP3-204ENST00000377656 SPATA25Q9BR10 227 aa13.23□□□□□ -0.29
CNTNAP3-204ENST00000377656 HCFC1P51610 2035 aa13.23□□□□□ -0.29
CNTNAP3-204ENST00000377656 FN1P02751 2386 aaKnown RBP13.23□□□□□ -0.29
CNTNAP3-204ENST00000377656 IGKV2D-26A0A0A0MRZ7 120 aa13.22□□□□□ -0.29
CNTNAP3-204ENST00000377656 CRYGDP07320 174 aa13.22□□□□□ -0.29
CNTNAP3-204ENST00000377656 IGLV2-11P01706 119 aa13.22□□□□□ -0.29
CNTNAP3-204ENST00000377656 ANKRD11Q6UB99 2663 aaPredicted RBP13.22□□□□□ -0.29
CNTNAP3-204ENST00000377656 HIGD2AQ9BW72 106 aa13.22□□□□□ -0.29
CNTNAP3-204ENST00000377656 TCL1BO95988 128 aa13.21□□□□□ -0.29
CNTNAP3-204ENST00000377656 RNF185Q96GF1 192 aa13.21□□□□□ -0.29
CNTNAP3-204ENST00000377656 TRBV27A0A0K0K1C4 114 aa13.21□□□□□ -0.29
CNTNAP3-204ENST00000377656 B9D2Q9BPU9 175 aa13.21□□□□□ -0.29
CNTNAP3-204ENST00000377656 TMEM223A0PJW6 202 aa13.2□□□□□ -0.3
CNTNAP3-204ENST00000377656 Q8N976 141 aa13.2□□□□□ -0.3
CNTNAP3-204ENST00000377656 LY6G6DO95868 133 aa13.2□□□□□ -0.3
CNTNAP3-204ENST00000377656 FAM110AQ9BQ89 295 aa13.2□□□□□ -0.3
CNTNAP3-204ENST00000377656 IBA57-AS1B1ANH7 110 aa13.2□□□□□ -0.3
CNTNAP3-204ENST00000377656 CEP192Q8TEP8 1941 aa13.2□□□□□ -0.3
CNTNAP3-204ENST00000377656 C14orf132Q9NPU4 83 aa13.2□□□□□ -0.3
CNTNAP3-204ENST00000377656 PROK1P58294 105 aa13.19□□□□□ -0.3
CNTNAP3-204ENST00000377656 LRP4O75096 1905 aa13.19□□□□□ -0.3
CNTNAP3-204ENST00000377656 TRBV6-5A0A0K0K1A5 114 aa13.19□□□□□ -0.3
CNTNAP3-204ENST00000377656 U3KQK5 164 aa13.19□□□□□ -0.3
CNTNAP3-204ENST00000377656 RNF183Q96D59 192 aa13.18□□□□□ -0.3
CNTNAP3-204ENST00000377656 IGLV1-40P01703 118 aa13.18□□□□□ -0.3
CNTNAP3-204ENST00000377656 RNASE3P12724 160 aaKnown RBP13.17□□□□□ -0.3
CNTNAP3-204ENST00000377656 LINC00308Q8TCZ7 52 aa13.17□□□□□ -0.3
CNTNAP3-204ENST00000377656 PYGO1Q9Y3Y4 419 aa13.17□□□□□ -0.3
CNTNAP3-204ENST00000377656 CDSNQ15517 529 aa13.17□□□□□ -0.3
CNTNAP3-204ENST00000377656 Q6ZS46 218 aa13.17□□□□□ -0.3
CNTNAP3-204ENST00000377656 PTPRSQ13332 1948 aa13.16□□□□□ -0.3
CNTNAP3-204ENST00000377656 ATG2AQ2TAZ0 1938 aa13.16□□□□□ -0.3
CNTNAP3-204ENST00000377656 KLLNB2CW77 178 aa13.16□□□□□ -0.3
CNTNAP3-204ENST00000377656 LINC00643Q86TS7 51 aa13.16□□□□□ -0.3
CNTNAP3-204ENST00000377656 SMIM20Q8N5G0 67 aa13.16□□□□□ -0.3
CNTNAP3-204ENST00000377656 CHKB-CPT1BH3BT56 60 aa13.16□□□□□ -0.3
CNTNAP3-204ENST00000377656 WFDC9Q8NEX5 89 aa13.16□□□□□ -0.3
CNTNAP3-204ENST00000377656 BBC3Q96PG8 261 aaPredicted RBP13.15□□□□□ -0.3
CNTNAP3-204ENST00000377656 G3V4G9 280 aa13.15□□□□□ -0.3
CNTNAP3-204ENST00000377656 RBX1P62877 108 aa13.15□□□□□ -0.3
CNTNAP3-204ENST00000377656 SPANXB1Q9NS25 103 aaPredicted RBP13.15□□□□□ -0.3
CNTNAP3-204ENST00000377656 H0Y9J4 135 aa13.15□□□□□ -0.3
CNTNAP3-204ENST00000377656 C11orf21Q9P2W6 132 aa13.14□□□□□ -0.31
CNTNAP3-204ENST00000377656 XAGE1AQ9HD64 81 aa13.14□□□□□ -0.31
CNTNAP3-204ENST00000377656 PIK3CD-AS1Q5SR53 167 aa13.14□□□□□ -0.31
CNTNAP3-204ENST00000377656 PRR9Q5T870 116 aa13.14□□□□□ -0.31
CNTNAP3-204ENST00000377656 MAPKAPK5-AS1Q8N8E1 139 aa13.14□□□□□ -0.31
CNTNAP3-204ENST00000377656 SS18L2Q9UHA2 77 aa13.13□□□□□ -0.31
CNTNAP3-204ENST00000377656 LRRK2Q5S007 2527 aa13.13□□□□□ -0.31
CNTNAP3-204ENST00000377656 BPY2O14599 106 aa13.12□□□□□ -0.31
CNTNAP3-204ENST00000377656 C5orf47Q569G3 176 aa13.12□□□□□ -0.31
CNTNAP3-204ENST00000377656 C18orf65Q6ZTR6 163 aa13.12□□□□□ -0.31
CNTNAP3-204ENST00000377656 NRACQ8N912 160 aa13.12□□□□□ -0.31
CNTNAP3-204ENST00000377656 SYCNQ0VAF6 134 aa13.12□□□□□ -0.31
CNTNAP3-204ENST00000377656 WFDC10AQ9H1F0 79 aa13.12□□□□□ -0.31
CNTNAP3-204ENST00000377656 ZNF462Q96JM2 2506 aa13.12□□□□□ -0.31
CNTNAP3-204ENST00000377656 PRB2P02812 416 aaPredicted RBP13.11□□□□□ -0.31
CNTNAP3-204ENST00000377656 DCANP1Q8TF63 244 aa13.11□□□□□ -0.31
CNTNAP3-204ENST00000377656 TP73-AS1Q9UF72 201 aa13.11□□□□□ -0.31
CNTNAP3-204ENST00000377656 TRAV10A0A0B4J240 114 aa13.11□□□□□ -0.31
CNTNAP3-204ENST00000377656 TSHBP01222 138 aa13.11□□□□□ -0.31
CNTNAP3-204ENST00000377656 A0A087WZ39 114 aa13.1□□□□□ -0.31
CNTNAP3-204ENST00000377656 FAM19A1Q7Z5A9 133 aa13.1□□□□□ -0.31
CNTNAP3-204ENST00000377656 PKD1L2Q7Z442 2459 aa13.1□□□□□ -0.31
CNTNAP3-204ENST00000377656 AVPP01185 164 aa13.1□□□□□ -0.31
CNTNAP3-204ENST00000377656 A0A096LNI7 61 aa13.09□□□□□ -0.31
CNTNAP3-204ENST00000377656 POLR2KP53803 58 aaKnown RBP13.09□□□□□ -0.31
CNTNAP3-204ENST00000377656 KIR2DL5BQ8NHK3 375 aa13.09□□□□□ -0.31
CNTNAP3-204ENST00000377656 C9orf85Q96MD7 179 aa13.09□□□□□ -0.31
CNTNAP3-204ENST00000377656 LINC00310P59036 64 aa13.08□□□□□ -0.32
CNTNAP3-204ENST00000377656 CD164L2Q6UWJ8 174 aa13.08□□□□□ -0.32
CNTNAP3-204ENST00000377656 TEX49A0A1B0GTD5 131 aa13.08□□□□□ -0.32
CNTNAP3-204ENST00000377656 C6orf99Q4VX62 202 aa13.07□□□□□ -0.32
CNTNAP3-204ENST00000377656 KPRPQ5T749 579 aaPredicted RBP13.07□□□□□ -0.32
CNTNAP3-204ENST00000377656 TRIAP1O43715 76 aa13.07□□□□□ -0.32
CNTNAP3-204ENST00000377656 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.06□□□□□ -0.32
CNTNAP3-204ENST00000377656 TRBV30A0A0K0K1B3 111 aa13.06□□□□□ -0.32
CNTNAP3-204ENST00000377656 SLPIP03973 132 aa13.06□□□□□ -0.32
CNTNAP3-204ENST00000377656 PRM2P04554 102 aa13.06□□□□□ -0.32
CNTNAP3-204ENST00000377656 SPTBN4Q9H254 2564 aa13.05□□□□□ -0.32
CNTNAP3-204ENST00000377656 A8MZ25 164 aa13.05□□□□□ -0.32
CNTNAP3-204ENST00000377656 LELP1Q5T871 98 aa13.05□□□□□ -0.32
CNTNAP3-204ENST00000377656 FAM19A5Q7Z5A7 132 aaPredicted RBP13.05□□□□□ -0.32
CNTNAP3-204ENST00000377656 UPK3BQ9BT76 320 aa13.04□□□□□ -0.32
CNTNAP3-204ENST00000377656 TRAV23DV6A0A075B6W5 121 aa13.04□□□□□ -0.32
CNTNAP3-204ENST00000377656 LOC100131303A0A0U1RQF7 123 aa13.04□□□□□ -0.32
CNTNAP3-204ENST00000377656 TIMM17BO60830 172 aa13.04□□□□□ -0.32
CNTNAP3-204ENST00000377656 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.04□□□□□ -0.32
CNTNAP3-204ENST00000377656 CNFNQ9BYD5 112 aa13.04□□□□□ -0.32
CNTNAP3-204ENST00000377656 UBE2D4Q9Y2X8 147 aa13.04□□□□□ -0.32
CNTNAP3-204ENST00000377656 CPAMD8Q8IZJ3 1885 aa13.04□□□□□ -0.32
CNTNAP3-204ENST00000377656 MRPS36P82909 103 aaKnown RBP13.03□□□□□ -0.32
CNTNAP3-204ENST00000377656 MRGPRG-AS1Q2M3A8 158 aa13.02□□□□□ -0.32
CNTNAP3-204ENST00000377656 COL5A1P20908 1838 aaPredicted RBP13.02□□□□□ -0.32
CNTNAP3-204ENST00000377656 LINC00959A0A1B0GUT2 108 aa13.02□□□□□ -0.32
CNTNAP3-204ENST00000377656 GAS8-AS1O95177 125 aa13.01□□□□□ -0.33
CNTNAP3-204ENST00000377656 C2orf91Q6ZV80 131 aa13.01□□□□□ -0.33
CNTNAP3-204ENST00000377656 LRCOL1A6NCL2 159 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms