RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 PRO0461Q9UI25 63 aa12.3□□□□□ -0.44
RXRB-201ENST00000374680 UBE2D4Q9Y2X8 147 aa12.3□□□□□ -0.44
RXRB-201ENST00000374680 TRAV13-1A0A0B4J241 112 aa12.3□□□□□ -0.44
RXRB-201ENST00000374680 LINC00694P0DN24 101 aa12.3□□□□□ -0.44
RXRB-201ENST00000374680 SMAGPQ0VAQ4 97 aa12.3□□□□□ -0.44
RXRB-201ENST00000374680 LRRC75A-AS1Q8N1F1 130 aa12.29□□□□□ -0.44
RXRB-201ENST00000374680 CDKN2A-AS1Q9UH64 79 aa12.29□□□□□ -0.44
RXRB-201ENST00000374680 NDUFA12Q9UI09 145 aa12.29□□□□□ -0.44
RXRB-201ENST00000374680 LINC01006Q8NI28 216 aa12.28□□□□□ -0.44
RXRB-201ENST00000374680 GAGE7O76087 117 aa12.28□□□□□ -0.44
RXRB-201ENST00000374680 GAGE12FP0CL80 117 aa12.28□□□□□ -0.44
RXRB-201ENST00000374680 GAGE12GP0CL81 117 aa12.28□□□□□ -0.44
RXRB-201ENST00000374680 GAGE12IP0CL82 117 aa12.28□□□□□ -0.44
RXRB-201ENST00000374680 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.28□□□□□ -0.44
RXRB-201ENST00000374680 COX6A2Q02221 97 aa12.27□□□□□ -0.44
RXRB-201ENST00000374680 LOC100131303A0A0U1RQF7 123 aa12.27□□□□□ -0.45
RXRB-201ENST00000374680 MRPS36P82909 103 aaKnown RBP12.25□□□□□ -0.45
RXRB-201ENST00000374680 TRGV2A0A075B6R0 118 aa12.25□□□□□ -0.45
RXRB-201ENST00000374680 A8MTW9 85 aa12.25□□□□□ -0.45
RXRB-201ENST00000374680 ERG28Q9UKR5 140 aa12.25□□□□□ -0.45
RXRB-201ENST00000374680 J3QR89 54 aa12.24□□□□□ -0.45
RXRB-201ENST00000374680 PYGO1Q9Y3Y4 419 aa12.24□□□□□ -0.45
RXRB-201ENST00000374680 GAGE12HA6NDE8 117 aa12.24□□□□□ -0.45
RXRB-201ENST00000374680 RS1O15537 224 aa12.24□□□□□ -0.45
RXRB-201ENST00000374680 ATRQ13535 2644 aa12.24□□□□□ -0.45
RXRB-201ENST00000374680 IGHV1-58A0A0C4DH39 117 aa12.24□□□□□ -0.45
RXRB-201ENST00000374680 UBE2D3P61077 147 aa12.24□□□□□ -0.45
RXRB-201ENST00000374680 UBE2D2P62837 147 aa12.24□□□□□ -0.45
RXRB-201ENST00000374680 OTOGQ6ZRI0 2925 aa12.23□□□□□ -0.45
RXRB-201ENST00000374680 C9JAW5 83 aa12.23□□□□□ -0.45
RXRB-201ENST00000374680 IGHV3-33P01772 117 aa12.23□□□□□ -0.45
RXRB-201ENST00000374680 ANK3Q12955 4377 aaKnown RBP12.22□□□□□ -0.45
RXRB-201ENST00000374680 VSIG2Q96IQ7 327 aa12.22□□□□□ -0.45
RXRB-201ENST00000374680 BEAN1Q3B7T3 259 aa12.22□□□□□ -0.45
RXRB-201ENST00000374680 NTM-AS1Q6ZSK4 140 aa12.21□□□□□ -0.45
RXRB-201ENST00000374680 TMEM263Q8WUH6 116 aaKnown RBP12.21□□□□□ -0.45
RXRB-201ENST00000374680 SPANXA1Q9NS26 97 aa12.21□□□□□ -0.45
RXRB-201ENST00000374680 RPL36AP83881 106 aaKnown RBP12.21□□□□□ -0.46
RXRB-201ENST00000374680 RPL36ALQ969Q0 106 aaKnown RBP12.21□□□□□ -0.46
RXRB-201ENST00000374680 TENM1Q9UKZ4 2725 aa12.2□□□□□ -0.46
RXRB-201ENST00000374680 GIG44P09565 113 aaPredicted RBP12.2□□□□□ -0.46
RXRB-201ENST00000374680 FOXI1Q12951 378 aa12.2□□□□□ -0.46
RXRB-201ENST00000374680 FHL3Q13643 280 aa12.2□□□□□ -0.46
RXRB-201ENST00000374680 TINCRA0A1B0GVN0 87 aa12.19□□□□□ -0.46
RXRB-201ENST00000374680 KRTAP1-1Q07627 177 aa12.19□□□□□ -0.46
RXRB-201ENST00000374680 TMEM101Q96IK0 257 aa12.19□□□□□ -0.46
RXRB-201ENST00000374680 SIGMAR1Q99720 223 aa12.19□□□□□ -0.46
RXRB-201ENST00000374680 LITAFQ99732 161 aa12.19□□□□□ -0.46
RXRB-201ENST00000374680 DEFB130BP0DP73 79 aa12.18□□□□□ -0.46
RXRB-201ENST00000374680 DEFB130AP0DP74 79 aa12.18□□□□□ -0.46
RXRB-201ENST00000374680 K7EQD1 137 aa12.18□□□□□ -0.46
RXRB-201ENST00000374680 TMEM86BQ8N661 226 aa12.18□□□□□ -0.46
RXRB-201ENST00000374680 Q9H8V8 135 aa12.18□□□□□ -0.46
RXRB-201ENST00000374680 CARD19Q96LW7 228 aa12.17□□□□□ -0.46
RXRB-201ENST00000374680 SCGB1A1P11684 91 aa12.17□□□□□ -0.46
RXRB-201ENST00000374680 LINC00242Q5T6M2 205 aa12.17□□□□□ -0.46
RXRB-201ENST00000374680 C1QTNF4Q9BXJ3 329 aa12.17□□□□□ -0.46
RXRB-201ENST00000374680 GAGE6Q13070 117 aa12.16□□□□□ -0.46
RXRB-201ENST00000374680 ANKRD29Q8N6D5 301 aa12.16□□□□□ -0.46
RXRB-201ENST00000374680 DNAJC30Q96LL9 226 aa12.16□□□□□ -0.46
RXRB-201ENST00000374680 TRGV4A0A0C4DH28 118 aa12.16□□□□□ -0.46
RXRB-201ENST00000374680 TRIAP1O43715 76 aa12.16□□□□□ -0.46
RXRB-201ENST00000374680 EDA2RQ9HAV5 297 aa12.16□□□□□ -0.46
RXRB-201ENST00000374680 LYRM7Q5U5X0 104 aa12.15□□□□□ -0.46
RXRB-201ENST00000374680 CLEC2BQ92478 149 aa12.15□□□□□ -0.46
RXRB-201ENST00000374680 A0A096LPF7 62 aa12.15□□□□□ -0.46
RXRB-201ENST00000374680 TRAV25A0A0B4J276 109 aa12.15□□□□□ -0.46
RXRB-201ENST00000374680 TOMM7Q9P0U1 55 aa12.15□□□□□ -0.46
RXRB-201ENST00000374680 UBE2L6O14933 153 aa12.14□□□□□ -0.47
RXRB-201ENST00000374680 SLC25A20O43772 301 aa12.14□□□□□ -0.47
RXRB-201ENST00000374680 MEIG1Q5JSS6 88 aa12.13□□□□□ -0.47
RXRB-201ENST00000374680 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.13□□□□□ -0.47
RXRB-201ENST00000374680 TRBV20-1A0A075B6N2 111 aa12.12□□□□□ -0.47
RXRB-201ENST00000374680 DEFB4AO15263 64 aa12.12□□□□□ -0.47
RXRB-201ENST00000374680 CIDEAO60543 219 aa12.12□□□□□ -0.47
RXRB-201ENST00000374680 SPATA3Q8NHX4 192 aa12.12□□□□□ -0.47
RXRB-201ENST00000374680 MIAQ16674 131 aa12.11□□□□□ -0.47
RXRB-201ENST00000374680 PIK3CD-AS1Q5SR53 167 aa12.11□□□□□ -0.47
RXRB-201ENST00000374680 ZFAND6Q6FIF0 208 aa12.11□□□□□ -0.47
RXRB-201ENST00000374680 PRIMA1Q86XR5 153 aa12.11□□□□□ -0.47
RXRB-201ENST00000374680 SPATA25Q9BR10 227 aa12.11□□□□□ -0.47
RXRB-201ENST00000374680 TRRAPQ9Y4A5 3859 aa12.11□□□□□ -0.47
RXRB-201ENST00000374680 A0A0B4J2C4 111 aa12.11□□□□□ -0.47
RXRB-201ENST00000374680 TEN1Q86WV5 123 aa12.11□□□□□ -0.47
RXRB-201ENST00000374680 TRAV4A0A0B4J268 109 aa12.1□□□□□ -0.47
RXRB-201ENST00000374680 PLAC8L1A1L4L8 177 aa12.1□□□□□ -0.47
RXRB-201ENST00000374680 RPL13AP40429 203 aaKnown RBP12.1□□□□□ -0.47
RXRB-201ENST00000374680 NTN5Q8WTR8 489 aaPredicted RBP12.1□□□□□ -0.47
RXRB-201ENST00000374680 IGLV1-51P01701 117 aa12.1□□□□□ -0.47
RXRB-201ENST00000374680 PF4P02776 101 aa12.1□□□□□ -0.47
RXRB-201ENST00000374680 RNASE1P07998 156 aaKnown RBP12.1□□□□□ -0.47
RXRB-201ENST00000374680 CHCHD5Q9BSY4 110 aa12.1□□□□□ -0.47
RXRB-201ENST00000374680 C11orf68Q9H3H3 251 aaKnown RBP12.1□□□□□ -0.47
RXRB-201ENST00000374680 C19orf73Q9NVV2 129 aa12.1□□□□□ -0.47
RXRB-201ENST00000374680 CRLF1O75462 422 aa12.09□□□□□ -0.47
RXRB-201ENST00000374680 CRYBA4P53673 196 aa12.09□□□□□ -0.47
RXRB-201ENST00000374680 CDC42SE2Q9NRR3 84 aa12.09□□□□□ -0.47
RXRB-201ENST00000374680 KRTAP10-3P60369 221 aa12.09□□□□□ -0.47
RXRB-201ENST00000374680 LINC00482Q8N8I6 264 aa12.09□□□□□ -0.47
RXRB-201ENST00000374680 TMEM243Q9BU79 118 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms