RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 FAM110AQ9BQ89 295 aa12.72□□□□□ -0.37
PTP4A1-201ENST00000370651 MYO9AB2RTY4 2548 aa12.72□□□□□ -0.37
PTP4A1-201ENST00000370651 BPY2O14599 106 aa12.72□□□□□ -0.37
PTP4A1-201ENST00000370651 CCDC179H3BU77 68 aa12.72□□□□□ -0.37
PTP4A1-201ENST00000370651 DEFB114Q30KQ6 69 aa12.71□□□□□ -0.37
PTP4A1-201ENST00000370651 C10orf142B7Z368 130 aa12.71□□□□□ -0.37
PTP4A1-201ENST00000370651 NDUFA7O95182 113 aa12.71□□□□□ -0.37
PTP4A1-201ENST00000370651 CCL18P55774 89 aa12.71□□□□□ -0.37
PTP4A1-201ENST00000370651 OTOGLQ3ZCN5 2332 aa12.71□□□□□ -0.37
PTP4A1-201ENST00000370651 KLLNB2CW77 178 aa12.71□□□□□ -0.37
PTP4A1-201ENST00000370651 J3QKU1 62 aa12.71□□□□□ -0.38
PTP4A1-201ENST00000370651 REG3AQ06141 175 aa12.7□□□□□ -0.38
PTP4A1-201ENST00000370651 FAM222AQ5U5X8 452 aa12.7□□□□□ -0.38
PTP4A1-201ENST00000370651 WDR87Q6ZQQ6 2873 aa12.7□□□□□ -0.38
PTP4A1-201ENST00000370651 CRYGDP07320 174 aa12.69□□□□□ -0.38
PTP4A1-201ENST00000370651 CHCHD10Q8WYQ3 142 aaPredicted RBP12.69□□□□□ -0.38
PTP4A1-201ENST00000370651 DSCAMO60469 2012 aa12.68□□□□□ -0.38
PTP4A1-201ENST00000370651 SERP2Q8N6R1 65 aa12.68□□□□□ -0.38
PTP4A1-201ENST00000370651 PIEZO2Q9H5I5 2752 aa12.68□□□□□ -0.38
PTP4A1-201ENST00000370651 WFDC11Q8NEX6 87 aa12.68□□□□□ -0.38
PTP4A1-201ENST00000370651 IGIPA6NJ69 53 aa12.68□□□□□ -0.38
PTP4A1-201ENST00000370651 EML5Q05BV3 1969 aa12.67□□□□□ -0.38
PTP4A1-201ENST00000370651 C9orf85Q96MD7 179 aa12.67□□□□□ -0.38
PTP4A1-201ENST00000370651 USP17L23D6RBM5 183 aa12.67□□□□□ -0.38
PTP4A1-201ENST00000370651 TRBV6-8A0A0A6YYG3 113 aa12.67□□□□□ -0.38
PTP4A1-201ENST00000370651 PKIGQ9Y2B9 76 aa12.67□□□□□ -0.38
PTP4A1-201ENST00000370651 CLPSL1A2RUU4 121 aa12.66□□□□□ -0.38
PTP4A1-201ENST00000370651 NAV2Q8IVL1 2488 aa12.66□□□□□ -0.38
PTP4A1-201ENST00000370651 C11orf71Q6IPW1 123 aa12.66□□□□□ -0.38
PTP4A1-201ENST00000370651 UBE2D4Q9Y2X8 147 aa12.66□□□□□ -0.38
PTP4A1-201ENST00000370651 UBE2D1P51668 147 aa12.66□□□□□ -0.38
PTP4A1-201ENST00000370651 C6orf99Q4VX62 202 aa12.66□□□□□ -0.38
PTP4A1-201ENST00000370651 SCXQ7RTU7 201 aa12.66□□□□□ -0.38
PTP4A1-201ENST00000370651 A0A096LNJ9 63 aa12.65□□□□□ -0.38
PTP4A1-201ENST00000370651 CLUHP3Q96NS8 147 aa12.65□□□□□ -0.38
PTP4A1-201ENST00000370651 C10orf99Q6UWK7 81 aa12.65□□□□□ -0.38
PTP4A1-201ENST00000370651 TRBV6-4A0A1B0GX49 114 aa12.65□□□□□ -0.38
PTP4A1-201ENST00000370651 COX7CP15954 63 aa12.65□□□□□ -0.38
PTP4A1-201ENST00000370651 Q6Q795 121 aa12.64□□□□□ -0.39
PTP4A1-201ENST00000370651 Q6YL49 198 aa12.64□□□□□ -0.39
PTP4A1-201ENST00000370651 DNAJC9-AS1A6NH13 148 aa12.64□□□□□ -0.39
PTP4A1-201ENST00000370651 C19orf84I3L1E1 186 aa12.64□□□□□ -0.39
PTP4A1-201ENST00000370651 MRPS36P82909 103 aaKnown RBP12.64□□□□□ -0.39
PTP4A1-201ENST00000370651 CCDC168Q8NDH2 2452 aa12.64□□□□□ -0.39
PTP4A1-201ENST00000370651 F8W735 103 aaPredicted RBP12.63□□□□□ -0.39
PTP4A1-201ENST00000370651 POM121L12Q8N7R1 296 aa12.63□□□□□ -0.39
PTP4A1-201ENST00000370651 CHKB-CPT1BH3BT56 60 aa12.62□□□□□ -0.39
PTP4A1-201ENST00000370651 UBE2AP49459 152 aa12.62□□□□□ -0.39
PTP4A1-201ENST00000370651 HIVEP3Q5T1R4 2406 aa12.62□□□□□ -0.39
PTP4A1-201ENST00000370651 MPLKIPQ8TAP9 179 aa12.61□□□□□ -0.39
PTP4A1-201ENST00000370651 FAM240AA0A1B0GVK7 77 aa12.61□□□□□ -0.39
PTP4A1-201ENST00000370651 UBE2D3P61077 147 aa12.6□□□□□ -0.39
PTP4A1-201ENST00000370651 UBE2D2P62837 147 aa12.6□□□□□ -0.39
PTP4A1-201ENST00000370651 PSMG3-AS1Q96PY0 264 aa12.6□□□□□ -0.39
PTP4A1-201ENST00000370651 SMIM11BQ8TCY0 68 aa12.6□□□□□ -0.39
PTP4A1-201ENST00000370651 DCANP1Q8TF63 244 aa12.6□□□□□ -0.39
PTP4A1-201ENST00000370651 SMIM9A6NGZ8 99 aa12.6□□□□□ -0.39
PTP4A1-201ENST00000370651 LYRM9A8MSI8 78 aa12.59□□□□□ -0.39
PTP4A1-201ENST00000370651 XAGE1AQ9HD64 81 aa12.59□□□□□ -0.39
PTP4A1-201ENST00000370651 IGLV4-69A0A075B6H9 119 aa12.59□□□□□ -0.39
PTP4A1-201ENST00000370651 COX8CQ7Z4L0 72 aa12.59□□□□□ -0.39
PTP4A1-201ENST00000370651 NDUFC2-KCTD14E9PQ53 114 aa12.58□□□□□ -0.39
PTP4A1-201ENST00000370651 CRIP2P52943 208 aaPredicted RBP12.58□□□□□ -0.4
PTP4A1-201ENST00000370651 TLN1Q9Y490 2541 aaKnown RBP12.57□□□□□ -0.4
PTP4A1-201ENST00000370651 H0Y9J4 135 aa12.57□□□□□ -0.4
PTP4A1-201ENST00000370651 TSPEAR-AS2P59090 65 aa12.56□□□□□ -0.4
PTP4A1-201ENST00000370651 Q6ZQY7 126 aa12.56□□□□□ -0.4
PTP4A1-201ENST00000370651 PRM2P04554 102 aa12.56□□□□□ -0.4
PTP4A1-201ENST00000370651 CEP192Q8TEP8 1941 aa12.56□□□□□ -0.4
PTP4A1-201ENST00000370651 ABCA2Q9BZC7 2435 aa12.56□□□□□ -0.4
PTP4A1-201ENST00000370651 IGLV1-40P01703 118 aa12.55□□□□□ -0.4
PTP4A1-201ENST00000370651 CCKP06307 115 aa12.55□□□□□ -0.4
PTP4A1-201ENST00000370651 IGHV4-31P0DP07 118 aa12.55□□□□□ -0.4
PTP4A1-201ENST00000370651 EP400Q96L91 3159 aa12.55□□□□□ -0.4
PTP4A1-201ENST00000370651 NDUFC1O43677 76 aa12.54□□□□□ -0.4
PTP4A1-201ENST00000370651 Q6JHZ5 121 aa12.54□□□□□ -0.4
PTP4A1-201ENST00000370651 PTPRSQ13332 1948 aa12.54□□□□□ -0.4
PTP4A1-201ENST00000370651 HIGD2AQ9BW72 106 aa12.53□□□□□ -0.4
PTP4A1-201ENST00000370651 IGF2RP11717 2491 aa12.53□□□□□ -0.4
PTP4A1-201ENST00000370651 IGLV2-18A0A075B6J9 118 aa12.53□□□□□ -0.4
PTP4A1-201ENST00000370651 LRRC75A-AS1Q8N1F1 130 aa12.53□□□□□ -0.4
PTP4A1-201ENST00000370651 SNURFQ9Y675 71 aa12.53□□□□□ -0.4
PTP4A1-201ENST00000370651 CD164L2Q6UWJ8 174 aa12.53□□□□□ -0.4
PTP4A1-201ENST00000370651 LINC00242Q5T6M2 205 aa12.52□□□□□ -0.4
PTP4A1-201ENST00000370651 LINC00959A0A1B0GUT2 108 aa12.52□□□□□ -0.4
PTP4A1-201ENST00000370651 Q6ZSV7 163 aa12.52□□□□□ -0.41
PTP4A1-201ENST00000370651 CDC42SE2Q9NRR3 84 aa12.52□□□□□ -0.41
PTP4A1-201ENST00000370651 ATP5EP56381 51 aaPredicted RBP12.52□□□□□ -0.41
PTP4A1-201ENST00000370651 LOC100131303A0A0U1RQF7 123 aa12.51□□□□□ -0.41
PTP4A1-201ENST00000370651 LRP4O75096 1905 aa12.51□□□□□ -0.41
PTP4A1-201ENST00000370651 LINC00694P0DN24 101 aa12.51□□□□□ -0.41
PTP4A1-201ENST00000370651 BBC3Q96PG8 261 aaPredicted RBP12.5□□□□□ -0.41
PTP4A1-201ENST00000370651 ZNF702PQ9H963 129 aa12.5□□□□□ -0.41
PTP4A1-201ENST00000370651 IGKV2-24A0A0C4DH68 120 aa12.5□□□□□ -0.41
PTP4A1-201ENST00000370651 A0A0U1RQV1 116 aa12.5□□□□□ -0.41
PTP4A1-201ENST00000370651 CPAMD8Q8IZJ3 1885 aa12.5□□□□□ -0.41
PTP4A1-201ENST00000370651 C1orf158Q8N1D5 194 aa12.49□□□□□ -0.41
PTP4A1-201ENST00000370651 SPTSSBQ8NFR3 76 aa12.49□□□□□ -0.41
PTP4A1-201ENST00000370651 FAM19A3Q7Z5A8 133 aa12.49□□□□□ -0.41
PTP4A1-201ENST00000370651 C3orf84H3BNL1 204 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms