RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 TRAV25A0A0B4J276 109 aa13□□□□□ -0.33
UBQLN4-201ENST00000368309 CDKN2A-AS1Q9UH64 79 aa13□□□□□ -0.33
UBQLN4-201ENST00000368309 LYRM7Q5U5X0 104 aa13□□□□□ -0.33
UBQLN4-201ENST00000368309 LITAFQ99732 161 aa13□□□□□ -0.33
UBQLN4-201ENST00000368309 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13□□□□□ -0.33
UBQLN4-201ENST00000368309 ERG28Q9UKR5 140 aa13□□□□□ -0.33
UBQLN4-201ENST00000368309 LINC01006Q8NI28 216 aa12.99□□□□□ -0.33
UBQLN4-201ENST00000368309 YAE1D1Q9NRH1 226 aa12.99□□□□□ -0.33
UBQLN4-201ENST00000368309 NDUFA7O95182 113 aa12.99□□□□□ -0.33
UBQLN4-201ENST00000368309 LINC00694P0DN24 101 aa12.99□□□□□ -0.33
UBQLN4-201ENST00000368309 Q1RN00 199 aa12.99□□□□□ -0.33
UBQLN4-201ENST00000368309 PDZD2O15018 2839 aa12.98□□□□□ -0.33
UBQLN4-201ENST00000368309 FOXI1Q12951 378 aa12.98□□□□□ -0.33
UBQLN4-201ENST00000368309 NOP10Q9NPE3 64 aaKnown RBP12.98□□□□□ -0.33
UBQLN4-201ENST00000368309 CLUHP3Q96NS8 147 aa12.98□□□□□ -0.33
UBQLN4-201ENST00000368309 TRBV20-1A0A075B6N2 111 aa12.97□□□□□ -0.33
UBQLN4-201ENST00000368309 COX6A2Q02221 97 aa12.97□□□□□ -0.33
UBQLN4-201ENST00000368309 C1QTNF4Q9BXJ3 329 aa12.97□□□□□ -0.33
UBQLN4-201ENST00000368309 SMAGPQ0VAQ4 97 aa12.97□□□□□ -0.33
UBQLN4-201ENST00000368309 SIGMAR1Q99720 223 aa12.97□□□□□ -0.33
UBQLN4-201ENST00000368309 RPL35AP18077 110 aaKnown RBP12.96□□□□□ -0.33
UBQLN4-201ENST00000368309 A0A0B4J2C4 111 aa12.96□□□□□ -0.33
UBQLN4-201ENST00000368309 DAND5Q8N907 189 aa12.96□□□□□ -0.33
UBQLN4-201ENST00000368309 GAGE12JA6NER3 117 aa12.96□□□□□ -0.34
UBQLN4-201ENST00000368309 GAGE4Q13068 117 aa12.96□□□□□ -0.34
UBQLN4-201ENST00000368309 GAGE5Q13069 117 aa12.96□□□□□ -0.34
UBQLN4-201ENST00000368309 HELZ2Q9BYK8 2649 aaKnown RBP12.96□□□□□ -0.34
UBQLN4-201ENST00000368309 TEX29Q8N6K0 151 aa12.95□□□□□ -0.34
UBQLN4-201ENST00000368309 IL17DQ8TAD2 202 aa12.95□□□□□ -0.34
UBQLN4-201ENST00000368309 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.95□□□□□ -0.34
UBQLN4-201ENST00000368309 GIG44P09565 113 aaPredicted RBP12.95□□□□□ -0.34
UBQLN4-201ENST00000368309 PLA2G2AP14555 144 aa12.95□□□□□ -0.34
UBQLN4-201ENST00000368309 NTM-AS1Q6ZSK4 140 aa12.95□□□□□ -0.34
UBQLN4-201ENST00000368309 RPL36AP83881 106 aaKnown RBP12.94□□□□□ -0.34
UBQLN4-201ENST00000368309 KRTAP1-1Q07627 177 aa12.94□□□□□ -0.34
UBQLN4-201ENST00000368309 RPL36ALQ969Q0 106 aaKnown RBP12.94□□□□□ -0.34
UBQLN4-201ENST00000368309 TMEM101Q96IK0 257 aa12.94□□□□□ -0.34
UBQLN4-201ENST00000368309 TRAV13-1A0A0B4J241 112 aa12.94□□□□□ -0.34
UBQLN4-201ENST00000368309 K7EQD1 137 aa12.93□□□□□ -0.34
UBQLN4-201ENST00000368309 C9JAW5 83 aa12.92□□□□□ -0.34
UBQLN4-201ENST00000368309 ZFAND6Q6FIF0 208 aa12.92□□□□□ -0.34
UBQLN4-201ENST00000368309 ZNF625Q96I27 306 aaPredicted RBP12.92□□□□□ -0.34
UBQLN4-201ENST00000368309 CARD19Q96LW7 228 aa12.92□□□□□ -0.34
UBQLN4-201ENST00000368309 FN1P02751 2386 aaKnown RBP12.92□□□□□ -0.34
UBQLN4-201ENST00000368309 GAGE7O76087 117 aa12.92□□□□□ -0.34
UBQLN4-201ENST00000368309 GAGE12FP0CL80 117 aa12.92□□□□□ -0.34
UBQLN4-201ENST00000368309 GAGE12GP0CL81 117 aa12.92□□□□□ -0.34
UBQLN4-201ENST00000368309 GAGE12IP0CL82 117 aa12.92□□□□□ -0.34
UBQLN4-201ENST00000368309 LINC00242Q5T6M2 205 aa12.92□□□□□ -0.34
UBQLN4-201ENST00000368309 SPATA25Q9BR10 227 aa12.92□□□□□ -0.34
UBQLN4-201ENST00000368309 A0A0U1RRA0 63 aa12.91□□□□□ -0.34
UBQLN4-201ENST00000368309 TEN1Q86WV5 123 aa12.91□□□□□ -0.34
UBQLN4-201ENST00000368309 NOTCH2Q04721 2471 aa12.91□□□□□ -0.34
UBQLN4-201ENST00000368309 TIRAPP58753 221 aa12.91□□□□□ -0.34
UBQLN4-201ENST00000368309 MIAQ16674 131 aa12.91□□□□□ -0.34
UBQLN4-201ENST00000368309 ATP6V0E2Q8NHE4 81 aa12.91□□□□□ -0.34
UBQLN4-201ENST00000368309 ANK3Q12955 4377 aaKnown RBP12.91□□□□□ -0.34
UBQLN4-201ENST00000368309 TRGV2A0A075B6R0 118 aa12.9□□□□□ -0.34
UBQLN4-201ENST00000368309 TRAV4A0A0B4J268 109 aa12.9□□□□□ -0.34
UBQLN4-201ENST00000368309 SPANXDQ9BXN6 97 aa12.9□□□□□ -0.34
UBQLN4-201ENST00000368309 SPANXCQ9NY87 97 aa12.9□□□□□ -0.34
UBQLN4-201ENST00000368309 LOC100131303A0A0U1RQF7 123 aa12.9□□□□□ -0.34
UBQLN4-201ENST00000368309 TRIAP1O43715 76 aa12.89□□□□□ -0.35
UBQLN4-201ENST00000368309 SLC25A20O43772 301 aa12.89□□□□□ -0.35
UBQLN4-201ENST00000368309 ANKRD29Q8N6D5 301 aa12.89□□□□□ -0.35
UBQLN4-201ENST00000368309 UNC79Q9P2D8 2635 aa12.89□□□□□ -0.35
UBQLN4-201ENST00000368309 FASNP49327 2511 aaKnown RBP12.89□□□□□ -0.35
UBQLN4-201ENST00000368309 TRBV10-1A0A0K0K1A3 114 aa12.89□□□□□ -0.35
UBQLN4-201ENST00000368309 RNASE1P07998 156 aaKnown RBP12.89□□□□□ -0.35
UBQLN4-201ENST00000368309 SBSPONQ8IVN8 264 aa12.89□□□□□ -0.35
UBQLN4-201ENST00000368309 IGLV5-45A0A087WSX0 123 aa12.88□□□□□ -0.35
UBQLN4-201ENST00000368309 DAZ2Q13117 558 aaKnown RBP12.88□□□□□ -0.35
UBQLN4-201ENST00000368309 DAZ4Q86SG3 579 aaKnown RBP12.88□□□□□ -0.35
UBQLN4-201ENST00000368309 PPDPFLQ8WWR9 84 aa12.88□□□□□ -0.35
UBQLN4-201ENST00000368309 DAZ3Q9NR90 486 aaKnown RBP12.88□□□□□ -0.35
UBQLN4-201ENST00000368309 PLAC8L1A1L4L8 177 aa12.88□□□□□ -0.35
UBQLN4-201ENST00000368309 Q9H8V8 135 aa12.88□□□□□ -0.35
UBQLN4-201ENST00000368309 HIVEP2P31629 2446 aa12.87□□□□□ -0.35
UBQLN4-201ENST00000368309 HERVK_113P63121 156 aa12.87□□□□□ -0.35
UBQLN4-201ENST00000368309 C19orf73Q9NVV2 129 aa12.87□□□□□ -0.35
UBQLN4-201ENST00000368309 IGLV1-51P01701 117 aa12.87□□□□□ -0.35
UBQLN4-201ENST00000368309 NBEAL2Q6ZNJ1 2754 aa12.87□□□□□ -0.35
UBQLN4-201ENST00000368309 NDUFA1O15239 70 aa12.86□□□□□ -0.35
UBQLN4-201ENST00000368309 C16orf95Q9H693 158 aa12.86□□□□□ -0.35
UBQLN4-201ENST00000368309 CDC42SE2Q9NRR3 84 aa12.86□□□□□ -0.35
UBQLN4-201ENST00000368309 SMR3AQ99954 134 aa12.85□□□□□ -0.35
UBQLN4-201ENST00000368309 CDIP1Q9H305 208 aa12.85□□□□□ -0.35
UBQLN4-201ENST00000368309 TRBV30A0A0K0K1B3 111 aa12.84□□□□□ -0.35
UBQLN4-201ENST00000368309 ATXN8Q156A1 80 aa12.84□□□□□ -0.35
UBQLN4-201ENST00000368309 C16orf74Q96GX8 76 aa12.84□□□□□ -0.35
UBQLN4-201ENST00000368309 ICOSQ9Y6W8 199 aa12.84□□□□□ -0.35
UBQLN4-201ENST00000368309 IGLV5-39A0A0G2JS06 123 aa12.84□□□□□ -0.35
UBQLN4-201ENST00000368309 SMIM1B2RUZ4 78 aa12.84□□□□□ -0.35
UBQLN4-201ENST00000368309 UBE2L6O14933 153 aa12.84□□□□□ -0.35
UBQLN4-201ENST00000368309 LINC01620Q4KN68 170 aa12.83□□□□□ -0.36
UBQLN4-201ENST00000368309 CSNK1G2-AS1Q8NCQ2 148 aa12.83□□□□□ -0.36
UBQLN4-201ENST00000368309 CSDC2Q9Y534 153 aaKnown RBP12.83□□□□□ -0.36
UBQLN4-201ENST00000368309 GCN1Q92616 2671 aaKnown RBP12.83□□□□□ -0.36
UBQLN4-201ENST00000368309 TRGV4A0A0C4DH28 118 aa12.82□□□□□ -0.36
UBQLN4-201ENST00000368309 IGKV3OR2-268A0A0C4DH90 116 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms